RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 C19orf48Q6RUI8 117 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 IGHG2P01859 326 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 MESP2Q0VG99 397 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 IGKV3D-15A0A087WSY6 115 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 FAM240AA0A1B0GVK7 77 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 IGKV3-15P01624 115 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 FOXA3P55318 350 aaPredicted RBP7.93□□□□□ -1.14
COL12A1-211ENST00000615798 ZNF750Q32MQ0 723 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 C1orf195Q5TG92 126 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 NAA38Q9BRA0 125 aaKnown RBP7.93□□□□□ -1.14
COL12A1-211ENST00000615798 IL11RAQ14626 422 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 OR11H4Q8NGC9 324 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 OR9G1Q8NH87 305 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 SDF2L1Q9HCN8 221 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 C1QL1O75973 258 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 C3AR1Q16581 482 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 GUSBP11Q6P575 273 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 AHRRA9YTQ3 701 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 IGHV3-9P01782 118 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 DSCR4P56555 118 aaPredicted RBP7.93□□□□□ -1.14
COL12A1-211ENST00000615798 RPUSD1Q9UJJ7 312 aaKnown RBP7.93□□□□□ -1.14
COL12A1-211ENST00000615798 A0A0U1RQV1 116 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 CEACAM4O75871 244 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 IL18BPO95998 194 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 CYP2G1PQ6ZSU1 146 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 ARPC1AQ92747 370 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 CXXC4Q9H2H0 198 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 RNF122Q9H9V4 155 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 ZNF79Q15937 498 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 VSTM2LQ96N03 204 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 SH3BGRL3Q9H299 93 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 LINC00158P58513 81 aa7.93□□□□□ -1.14
COL12A1-211ENST00000615798 SF3B5Q9BWJ5 86 aaKnown RBP7.93□□□□□ -1.14
COL12A1-211ENST00000615798 SHISA7A6NL88 538 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 KISS1RQ969F8 398 aaPredicted RBP7.92□□□□□ -1.14
COL12A1-211ENST00000615798 JMJD8Q96S16 334 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 FAM231BA6NCW3 169 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 SRP19P09132 144 aaKnown RBP7.92□□□□□ -1.14
COL12A1-211ENST00000615798 VN1R4Q7Z5H5 301 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 HOGA1Q86XE5 327 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 LCTP09848 1927 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 NBL1P41271 181 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 TSPAN7P41732 249 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 ZNF658BQ4V348 819 aaPredicted RBP7.92□□□□□ -1.14
COL12A1-211ENST00000615798 HEPN1Q6WQI6 88 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 SPEM1Q8N4L4 309 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 MOSP00540 346 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 DAD1P61803 113 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 ZNF362Q5T0B9 420 aaPredicted RBP7.92□□□□□ -1.14
COL12A1-211ENST00000615798 RNF166Q96A37 237 aaPredicted RBP7.92□□□□□ -1.14
COL12A1-211ENST00000615798 HIGD1CA8MV81 97 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 IGHG3P01860 377 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 MIC13Q5XKP0 118 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 PRDM14Q9GZV8 571 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 USF3Q68DE3 2245 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 FOXI3A8MTJ6 420 aaPredicted RBP7.92□□□□□ -1.14
COL12A1-211ENST00000615798 PAX1P15863 534 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 IGFBP6P24592 240 aaPredicted RBP7.92□□□□□ -1.14
COL12A1-211ENST00000615798 LAGE3Q14657 143 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 TMEM42Q69YG0 159 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 ID4P47928 161 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 TMEM196Q5HYL7 178 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 TMEM190Q8WZ59 177 aa7.92□□□□□ -1.14
COL12A1-211ENST00000615798 IGHV3-64DA0A0J9YX35 117 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 CXCL5P42830 114 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 PHF7Q9BWX1 381 aaPredicted RBP7.91□□□□□ -1.14
COL12A1-211ENST00000615798 CDCP2Q5VXM1 449 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 SMIM8Q96KF7 97 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 KCNK17Q96T54 332 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 UPK2O00526 184 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 CA11O75493 328 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 IGKV3-7A0A075B6H7 116 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 COL4A5P29400 1685 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 SPRY3O43610 288 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 NPSP0C0P6 89 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 ZP4Q12836 540 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 ATG4DQ86TL0 474 aaPredicted RBP7.91□□□□□ -1.14
COL12A1-211ENST00000615798 WFDC9Q8NEX5 89 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 EPPINO95925 133 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 PNLIPP16233 465 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 WFDC8Q8IUA0 241 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 TMEM252Q8N6L7 170 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 RFESDQ8TAC1 157 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 A0A0U1RQV5 110 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 GFRA3O60609 400 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 CD8AP01732 235 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 SP7Q8TDD2 431 aaPredicted RBP7.91□□□□□ -1.14
COL12A1-211ENST00000615798 IGHV3-43A0A0B4J1X8 118 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 IGHV3-43DP0DP04 118 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 EMDP50402 254 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 GUSBP1Q15486 140 aa7.91□□□□□ -1.14
COL12A1-211ENST00000615798 WNT2P09544 360 aa7.9□□□□□ -1.14
COL12A1-211ENST00000615798 TMEM91Q6ZNR0 172 aa7.9□□□□□ -1.14
COL12A1-211ENST00000615798 CIARTQ8N365 385 aaPredicted RBP7.9□□□□□ -1.14
COL12A1-211ENST00000615798 ZNF625Q96I27 306 aaPredicted RBP7.9□□□□□ -1.14
COL12A1-211ENST00000615798 OTOGLQ3ZCN5 2332 aa7.9□□□□□ -1.14
COL12A1-211ENST00000615798 TEX38Q6PEX7 206 aa7.9□□□□□ -1.14
COL12A1-211ENST00000615798 DSCR8Q96T75 97 aa7.9□□□□□ -1.14
COL12A1-211ENST00000615798 A0A1W2PRD5 423 aa7.9□□□□□ -1.14
COL12A1-211ENST00000615798 A0A1W2PRF3 423 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms