RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 SAA2P0DJI9 122 aaPredicted RBP3.84□□□□□ -1.79
CHD9-221ENST00000615216 FOXL2P58012 376 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 CTAG1AP78358 180 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 TMEM170BQ5T4T1 132 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 PEAR1Q5VY43 1037 aaPredicted RBP3.84□□□□□ -1.79
CHD9-221ENST00000615216 RASL11AQ6T310 242 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 FAM168AQ92567 244 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 IGKV3D-15A0A087WSY6 115 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 IGKV3-15P01624 115 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 LHX2P50458 406 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 CFHR1Q03591 330 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 ZNRF1Q8ND25 227 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 TCRBV4S1A1TA0A5B7 111 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 HIGD1CA8MV81 97 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 TTC9CQ8N5M4 171 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 NUDT10Q8NFP7 164 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 FOXC2Q99958 501 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 SLC25A2Q9BXI2 301 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 DENND4CQ5VZ89 1909 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 UPK2O00526 184 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 TIAF1O95411 115 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 TNFRSF14Q92956 283 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 GPHA2Q96T91 129 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 MYO7BQ6PIF6 2116 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 EFEMP2O95967 443 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 TYMSP04818 313 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 IGHV1-2P23083 117 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 CNTFRP26992 372 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 CCL20P78556 96 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 Q5BKY6 102 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 ZNF324BQ6AW86 544 aaPredicted RBP3.84□□□□□ -1.8
CHD9-221ENST00000615216 TMEM144Q7Z5S9 345 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 NXT2Q9NPJ8 142 aaKnown RBP3.84□□□□□ -1.8
CHD9-221ENST00000615216 OSTCQ9NRP0 149 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 TMEM242Q9NWH2 141 aa3.84□□□□□ -1.8
CHD9-221ENST00000615216 AHCTF1Q8WYP5 2266 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 ZNF318Q5VUA4 2279 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 F2Z2F3 143 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 CTSBP07858 339 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 DTX1Q86Y01 620 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 FDCSPQ8NFU4 85 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 OR13A1Q8NGR1 328 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 SLC25A28Q96A46 364 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 TRAV14DV4A0A0A6YYC5 116 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 VDAC2P45880 294 aaPredicted RBP3.83□□□□□ -1.8
CHD9-221ENST00000615216 PLAURQ03405 335 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 TGIF1Q15583 401 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 KIAA1644Q3SXP7 199 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 ORMDL2Q53FV1 153 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 C1QL2Q7Z5L3 287 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 ATOH7Q8N100 152 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 SDK2Q58EX2 2172 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 PGPEP1LA6NFU8 196 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 CRYBA2P53672 197 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 CFAP161Q6P656 301 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 OR5A1Q8NGJ0 315 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 RNASE6Q93091 150 aaKnown RBP3.83□□□□□ -1.8
CHD9-221ENST00000615216 IMMP1LQ96LU5 166 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 COLQQ9Y215 455 aaPredicted RBP3.83□□□□□ -1.8
CHD9-221ENST00000615216 TRGV11A0A075B6L2 103 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 ATXN7O15265 892 aaPredicted RBP3.83□□□□□ -1.8
CHD9-221ENST00000615216 RFPL3SP0C7P2 107 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 CEACAM1P13688 526 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 C21orf62-AS1Q17RA5 79 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 NIT1Q86X76 327 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 DOCK9Q9BZ29 2069 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 C17orf100A8MU93 164 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 SIGLEC12Q96PQ1 595 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 GSN-AS1Q9NRJ2 163 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 ZNF257Q9Y2Q1 563 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 DOCK7Q96N67 2140 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 TRAV24A0A0B4J272 114 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 DUSP14O95147 198 aaKnown RBP3.83□□□□□ -1.8
CHD9-221ENST00000615216 TMEM50AO95807 157 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 SAA1P0DJI8 122 aaPredicted RBP3.83□□□□□ -1.8
CHD9-221ENST00000615216 GPR183P32249 361 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 SRSF1Q07955 248 aaKnown RBP eCLIP3.83□□□□□ -1.88e-9■□□□□ 8.9
CHD9-221ENST00000615216 ZNF418Q8TF45 676 aaPredicted RBP3.83□□□□□ -1.8
CHD9-221ENST00000615216 ST20Q9HBF5 79 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 A0A0G2JMM0 328 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 A0A1W2PPB8 328 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 A0A1W2PRE2 83 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 A0A1W2PRS3 328 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 KIR3DP1A8MWS1 328 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 M0R381 172 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 CD5P06127 495 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 BTCP35070 178 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 ZXDCQ2QGD7 858 aaPredicted RBP3.83□□□□□ -1.8
CHD9-221ENST00000615216 JMJD8Q96S16 334 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 TMEM133Q9H2Q1 129 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 TRAV1-1A0A0B4J248 108 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 RNF222A6NCQ9 220 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 TMEM262E9PQX1 116 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 SNRPCP09234 159 aaKnown RBP3.83□□□□□ -1.8
CHD9-221ENST00000615216 CMC4P56277 68 aaPredicted RBP3.83□□□□□ -1.8
CHD9-221ENST00000615216 MIR17HGQ75NE6 70 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 TMEM167AQ8TBQ9 72 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 APC2O95996 2303 aa3.83□□□□□ -1.8
CHD9-221ENST00000615216 THSD7BQ9C0I4 1608 aa3.82□□□□□ -1.8
CHD9-221ENST00000615216 LOC102723996A0A087X1L8 192 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms