RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 TSSC4Q9Y5U2 329 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-211ENST00000613795 SPAARA0A1B0GVQ0 90 aa5.79□□□□□ -1.48
CLCN3-211ENST00000613795 IGHV3-13P01766 116 aa5.79□□□□□ -1.48
CLCN3-211ENST00000613795 IGHV3-7P01780 117 aa5.79□□□□□ -1.48
CLCN3-211ENST00000613795 NBEAP1P0C6P0 100 aa5.79□□□□□ -1.48
CLCN3-211ENST00000613795 ATXN8Q156A1 80 aa5.79□□□□□ -1.48
CLCN3-211ENST00000613795 ABHD12Q8N2K0 398 aa5.79□□□□□ -1.48
CLCN3-211ENST00000613795 OR5AN1Q8NGI8 311 aa5.79□□□□□ -1.48
CLCN3-211ENST00000613795 KLF12Q9Y4X4 402 aa5.79□□□□□ -1.48
CLCN3-211ENST00000613795 PSMB11A5LHX3 300 aa5.79□□□□□ -1.48
CLCN3-211ENST00000613795 FAM231BA6NCW3 169 aa5.79□□□□□ -1.48
CLCN3-211ENST00000613795 GAGE12HA6NDE8 117 aa5.79□□□□□ -1.48
CLCN3-211ENST00000613795 FAM106AQ4KMX7 169 aa5.79□□□□□ -1.48
CLCN3-211ENST00000613795 TEX43Q6ZNM6 134 aa5.79□□□□□ -1.48
CLCN3-211ENST00000613795 CACNG8Q8WXS5 425 aa5.79□□□□□ -1.48
CLCN3-211ENST00000613795 PHLDA3Q9Y5J5 127 aa5.79□□□□□ -1.48
CLCN3-211ENST00000613795 SCN1AP35498 2009 aa5.79□□□□□ -1.48
CLCN3-211ENST00000613795 MLNRO43193 412 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 TFF2Q03403 129 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 C3AR1Q16581 482 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 FAM90A2PQ658T7 463 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 LINC00114Q6XXX2 140 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 LINC00305Q7Z4B0 112 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 IFI27L2Q9H2X8 130 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 PTPRFP10586 1907 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 IGHV2-26A0A0B4J1V2 119 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 SYNGR3O43761 229 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 PLAUP00749 431 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 SLC25A45Q8N413 288 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 KIR3DL3Q8N743 410 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 COQ2Q96H96 371 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 CALYQ9NYX4 217 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 CRIM1Q9NZV1 1036 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 ZNF236Q9UL36 1845 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 TRIP11Q15643 1979 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-211ENST00000613795 TMEM8BA6NDV4 472 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 PFN1P07737 140 aaKnown RBP5.78□□□□□ -1.48
CLCN3-211ENST00000613795 LOXL3P58215 753 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 SRSF7Q16629 238 aaKnown RBP eCLIP5.78□□□□□ -1.48
CLCN3-211ENST00000613795 RPRMLQ8N4K4 120 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 EEF1AKMT3Q96AZ1 226 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 GPHA2Q96T91 129 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 CHTOPQ9Y3Y2 248 aaKnown RBP5.78□□□□□ -1.48
CLCN3-211ENST00000613795 KIR2DL5BA0A0G2JN68 375 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 KIR2DL5BA0A0G2JPC4 375 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 NDUFA3O95167 84 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 REG1AP05451 166 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 AZU1P20160 251 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 KLF17Q5JT82 389 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-211ENST00000613795 KIR2DL5AQ8N109 375 aa5.78□□□□□ -1.48
CLCN3-211ENST00000613795 IGHV2OR16-5A0A0B4J2B6 119 aa5.77□□□□□ -1.48
CLCN3-211ENST00000613795 hDV102S1A0JD36 115 aa5.77□□□□□ -1.48
CLCN3-211ENST00000613795 FAM90A9PA6NNJ1 464 aa5.77□□□□□ -1.48
CLCN3-211ENST00000613795 C9orf153Q5TBE3 101 aa5.77□□□□□ -1.48
CLCN3-211ENST00000613795 MIR17HGQ75NE6 70 aa5.77□□□□□ -1.48
CLCN3-211ENST00000613795 CLUHP3Q96NS8 147 aa5.77□□□□□ -1.48
CLCN3-211ENST00000613795 ERG28Q9UKR5 140 aa5.77□□□□□ -1.48
CLCN3-211ENST00000613795 IGKV3-11P04433 115 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 IGFBP2P18065 325 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 SUPT4H1P63272 117 aaKnown RBP5.77□□□□□ -1.49
CLCN3-211ENST00000613795 ATP5G2Q06055 141 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 MEIG1Q5JSS6 88 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 Q6ZT83 130 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 ARPC1AQ92747 370 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 KLK15Q9H2R5 256 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 FSCN3Q9NQT6 498 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 OTORQ9NRC9 128 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 EPDR1Q9UM22 224 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 WDR83OSQ9Y284 106 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 TRAV8-1A0A0A6YYK1 113 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 APOBEC3AP31941 199 aaPredicted RBP5.77□□□□□ -1.49
CLCN3-211ENST00000613795 FOXL2P58012 376 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 GAGE5Q13069 117 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 GAGE6Q13070 117 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 PPDPFLQ8WWR9 84 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 CLEC7AQ9BXN2 247 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 IGHV3OR15-7A0A075B7D8 119 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 TRAV2A0A0B4J234 112 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 RAMP3O60896 148 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 IGHV4-39P01824 125 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 SRSF1Q07955 248 aaKnown RBP eCLIP5.77□□□□□ -1.49
CLCN3-211ENST00000613795 TMEM144Q7Z5S9 345 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 TMEM101Q96IK0 257 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 RAX2Q96IS3 184 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 SMCHD1A6NHR9 2005 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 PRTN3P24158 256 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 TMEM155Q4W5P6 130 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 SLC25A48Q6ZT89 311 aaKnown RBP5.77□□□□□ -1.49
CLCN3-211ENST00000613795 VKORC1L1Q8N0U8 176 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 ITLN1Q8WWA0 313 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 COL4A5P29400 1685 aa5.77□□□□□ -1.49
CLCN3-211ENST00000613795 PATE3B3GLJ2 98 aa5.76□□□□□ -1.49
CLCN3-211ENST00000613795 IFITM1P13164 125 aa5.76□□□□□ -1.49
CLCN3-211ENST00000613795 SRSF6Q13247 344 aaKnown RBP5.76□□□□□ -1.49
CLCN3-211ENST00000613795 LCN12Q6JVE5 192 aa5.76□□□□□ -1.49
CLCN3-211ENST00000613795 MORN3Q6PF18 240 aaPredicted RBP5.76□□□□□ -1.49
CLCN3-211ENST00000613795 ARID1AO14497 2285 aa5.76□□□□□ -1.49
CLCN3-211ENST00000613795 ARID2Q68CP9 1835 aa5.76□□□□□ -1.49
CLCN3-211ENST00000613795 ZNF815PA8K554 130 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms