RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 SSX3Q99909 188 aa9.76□□□□□ -0.85
CBWD1-220ENST00000612045 FOXC2Q99958 501 aa9.76□□□□□ -0.85
CBWD1-220ENST00000612045 RASL11BQ9BPW5 248 aa9.76□□□□□ -0.85
CBWD1-220ENST00000612045 HRH4Q9H3N8 390 aa9.76□□□□□ -0.85
CBWD1-220ENST00000612045 C17orf112F2Z3M2 114 aa9.75□□□□□ -0.85
CBWD1-220ENST00000612045 HLA-DRB1P01911 266 aa9.75□□□□□ -0.85
CBWD1-220ENST00000612045 MFAP2P55001 183 aa9.75□□□□□ -0.85
CBWD1-220ENST00000612045 NDPQ00604 133 aa9.75□□□□□ -0.85
CBWD1-220ENST00000612045 AKR1C1Q04828 323 aa9.75□□□□□ -0.85
CBWD1-220ENST00000612045 GAMTQ14353 236 aa9.75□□□□□ -0.85
CBWD1-220ENST00000612045 MLANAQ16655 118 aa9.75□□□□□ -0.85
CBWD1-220ENST00000612045 TEPPQ6URK8 271 aa9.75□□□□□ -0.85
CBWD1-220ENST00000612045 DPPA3Q6W0C5 159 aa9.75□□□□□ -0.85
CBWD1-220ENST00000612045 ARPC1AQ92747 370 aa9.75□□□□□ -0.85
CBWD1-220ENST00000612045 MGST2Q99735 147 aa9.75□□□□□ -0.85
CBWD1-220ENST00000612045 FAM103A1Q9BTL3 118 aaKnown RBP9.75□□□□□ -0.85
CBWD1-220ENST00000612045 VSIRQ9H7M9 311 aa9.75□□□□□ -0.85
CBWD1-220ENST00000612045 F11RQ9Y624 299 aaKnown RBP9.75□□□□□ -0.85
CBWD1-220ENST00000612045 S100A1P23297 94 aa9.75□□□□□ -0.85
CBWD1-220ENST00000612045 OPRK1P41145 380 aa9.75□□□□□ -0.85
CBWD1-220ENST00000612045 ELLP55199 621 aaPredicted RBP9.75□□□□□ -0.85
CBWD1-220ENST00000612045 ACSM6Q6P461 480 aa9.75□□□□□ -0.85
CBWD1-220ENST00000612045 SLC16A13Q7RTY0 426 aa9.75□□□□□ -0.85
CBWD1-220ENST00000612045 TMEM219Q86XT9 240 aa9.75□□□□□ -0.85
CBWD1-220ENST00000612045 CIARTQ8N365 385 aaPredicted RBP9.75□□□□□ -0.85
CBWD1-220ENST00000612045 MARC2Q969Z3 335 aa9.75□□□□□ -0.85
CBWD1-220ENST00000612045 RBM14Q96PK6 669 aaKnown RBP9.75□□□□□ -0.85
CBWD1-220ENST00000612045 SLC25A33Q9BSK2 321 aa9.75□□□□□ -0.85
CBWD1-220ENST00000612045 FNDC4Q9H6D8 234 aaPredicted RBP9.75□□□□□ -0.85
CBWD1-220ENST00000612045 RPRMQ9NS64 109 aa9.75□□□□□ -0.85
CBWD1-220ENST00000612045 ANK3Q12955 4377 aaKnown RBP9.74□□□□□ -0.85
CBWD1-220ENST00000612045 IGHV7-81A0A0B4J1V7 117 aa9.74□□□□□ -0.85
CBWD1-220ENST00000612045 FSHBP01225 129 aa9.74□□□□□ -0.85
CBWD1-220ENST00000612045 CTRB1P17538 263 aa9.74□□□□□ -0.85
CBWD1-220ENST00000612045 AANATQ16613 207 aa9.74□□□□□ -0.85
CBWD1-220ENST00000612045 TMEM41BQ5BJD5 291 aa9.74□□□□□ -0.85
CBWD1-220ENST00000612045 FFAR4Q5NUL3 377 aa9.74□□□□□ -0.85
CBWD1-220ENST00000612045 CTRB2Q6GPI1 263 aa9.74□□□□□ -0.85
CBWD1-220ENST00000612045 TMEM144Q7Z5S9 345 aa9.74□□□□□ -0.85
CBWD1-220ENST00000612045 EIF4E3Q8N5X7 224 aaKnown RBP9.74□□□□□ -0.85
CBWD1-220ENST00000612045 OR2T6Q8NHC8 308 aa9.74□□□□□ -0.85
CBWD1-220ENST00000612045 GGTLC1Q9BX51 225 aa9.74□□□□□ -0.85
CBWD1-220ENST00000612045 DMRT1Q9Y5R6 373 aa9.74□□□□□ -0.85
CBWD1-220ENST00000612045 FLNAP21333 2647 aaKnown RBP9.74□□□□□ -0.85
CBWD1-220ENST00000612045 NUDT19A8MXV4 375 aa9.73□□□□□ -0.85
CBWD1-220ENST00000612045 H3BUX3 64 aa9.73□□□□□ -0.85
CBWD1-220ENST00000612045 AGPAT2O15120 278 aa9.73□□□□□ -0.85
CBWD1-220ENST00000612045 MBP02144 154 aa9.73□□□□□ -0.85
CBWD1-220ENST00000612045 RAB31Q13636 194 aa9.73□□□□□ -0.85
CBWD1-220ENST00000612045 IL34Q6ZMJ4 242 aa9.73□□□□□ -0.85
CBWD1-220ENST00000612045 C5orf56Q8N8D9 126 aa9.73□□□□□ -0.85
CBWD1-220ENST00000612045 NANPQ8TBE9 248 aa9.73□□□□□ -0.85
CBWD1-220ENST00000612045 MISP3Q96FF7 219 aa9.73□□□□□ -0.85
CBWD1-220ENST00000612045 SLC35E1Q96K37 410 aa9.73□□□□□ -0.85
CBWD1-220ENST00000612045 HSPB9Q9BQS6 159 aa9.73□□□□□ -0.85
CBWD1-220ENST00000612045 WNT10AQ9GZT5 417 aa9.73□□□□□ -0.85
CBWD1-220ENST00000612045 MOB4Q9Y3A3 225 aa9.73□□□□□ -0.85
CBWD1-220ENST00000612045 IGKV1OR2-108A0A075B7D4 117 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 RAB19A4D1S5 217 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 CORTO00230 105 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 SOX15O60248 233 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 TSPAN15O95858 294 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 CRYGCP07315 174 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 H2AFB1P0C5Y9 115 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 EGR2P11161 476 aaPredicted RBP9.72□□□□□ -0.85
CBWD1-220ENST00000612045 DEFA4P12838 97 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 RAB2AP61019 212 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 ASPHD1Q5U4P2 390 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 BCL6BQ8N143 479 aaPredicted RBP9.72□□□□□ -0.85
CBWD1-220ENST00000612045 ACY3Q96HD9 319 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 MXRA5Q9NR99 2828 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 MDFIC2A0A1B0GVS7 189 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 A6NDX4 124 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 NPIPB5A8MRT5 1133 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 SMAD7O15105 426 aaKnown RBP9.72□□□□□ -0.85
CBWD1-220ENST00000612045 IGHV3-48P01763 117 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 LY6EQ16553 131 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 DEFB112Q30KQ8 113 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 MIC13Q5XKP0 118 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 ETFRF1Q6IPR1 90 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 RPP25LQ8N5L8 163 aaKnown RBP9.72□□□□□ -0.85
CBWD1-220ENST00000612045 TTC9CQ8N5M4 171 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 OR1L6Q8NGR2 347 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 C22orf15Q8WYQ4 148 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 RCC1LQ96I51 464 aaKnown RBP9.72□□□□□ -0.85
CBWD1-220ENST00000612045 KCNIP2Q9NS61 270 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 PXMP4Q9Y6I8 212 aa9.72□□□□□ -0.85
CBWD1-220ENST00000612045 A0A1B0GV50 99 aa9.71□□□□□ -0.85
CBWD1-220ENST00000612045 ANKRD34BA5PLL1 514 aa9.71□□□□□ -0.85
CBWD1-220ENST00000612045 SH2D7A6NKC9 451 aaPredicted RBP9.71□□□□□ -0.85
CBWD1-220ENST00000612045 I3L521 148 aa9.71□□□□□ -0.85
CBWD1-220ENST00000612045 AMY1AP04745 511 aa9.71□□□□□ -0.85
CBWD1-220ENST00000612045 M6PRP20645 277 aa9.71□□□□□ -0.85
CBWD1-220ENST00000612045 RPL29P47914 159 aaKnown RBP9.71□□□□□ -0.85
CBWD1-220ENST00000612045 ZNF726P1Q15940 193 aa9.71□□□□□ -0.85
CBWD1-220ENST00000612045 ACOT6Q3I5F7 207 aaPredicted RBP9.71□□□□□ -0.85
CBWD1-220ENST00000612045 SPSB3Q6PJ21 355 aa9.71□□□□□ -0.85
CBWD1-220ENST00000612045 C9orf139Q6ZV77 190 aa9.71□□□□□ -0.85
CBWD1-220ENST00000612045 LFNGQ8NES3 379 aa9.71□□□□□ -0.85
CBWD1-220ENST00000612045 OR10G4Q8NGN3 311 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms