RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 SAA1P0DJI8 122 aaPredicted RBP13.07□□□□□ -0.32
TNXB-208ENST00000611016 MRAP2Q96G30 205 aa13.07□□□□□ -0.32
TNXB-208ENST00000611016 CACNA1EQ15878 2313 aa13.07□□□□□ -0.32
TNXB-208ENST00000611016 C7orf71A4D174 169 aa13.07□□□□□ -0.32
TNXB-208ENST00000611016 DNAL4O96015 105 aa13.07□□□□□ -0.32
TNXB-208ENST00000611016 LEPP41159 167 aa13.07□□□□□ -0.32
TNXB-208ENST00000611016 C21orf62-AS1Q17RA5 79 aa13.07□□□□□ -0.32
TNXB-208ENST00000611016 C19orf67A6NJJ6 358 aa13.06□□□□□ -0.32
TNXB-208ENST00000611016 PRSS2P07478 247 aa13.06□□□□□ -0.32
TNXB-208ENST00000611016 RTBDNQ9BSG5 229 aaPredicted RBP13.06□□□□□ -0.32
TNXB-208ENST00000611016 SDF2L1Q9HCN8 221 aa13.06□□□□□ -0.32
TNXB-208ENST00000611016 M0R381 172 aa13.06□□□□□ -0.32
TNXB-208ENST00000611016 KIAA1644Q3SXP7 199 aa13.06□□□□□ -0.32
TNXB-208ENST00000611016 FGFBP3Q8TAT2 258 aa13.06□□□□□ -0.32
TNXB-208ENST00000611016 KCNS1Q96KK3 526 aa13.06□□□□□ -0.32
TNXB-208ENST00000611016 CGAP01215 116 aa13.06□□□□□ -0.32
TNXB-208ENST00000611016 HTN3P15516 51 aa13.06□□□□□ -0.32
TNXB-208ENST00000611016 TIMP3P35625 211 aa13.06□□□□□ -0.32
TNXB-208ENST00000611016 FAM166AQ6J272 317 aa13.06□□□□□ -0.32
TNXB-208ENST00000611016 TMEM144Q7Z5S9 345 aa13.06□□□□□ -0.32
TNXB-208ENST00000611016 IGHV1-46P01743 117 aa13.06□□□□□ -0.32
TNXB-208ENST00000611016 ARL6IP6Q8N6S5 226 aa13.06□□□□□ -0.32
TNXB-208ENST00000611016 WFIKKN1Q96NZ8 548 aa13.06□□□□□ -0.32
TNXB-208ENST00000611016 LINC01587Q99440 93 aa13.06□□□□□ -0.32
TNXB-208ENST00000611016 PEF1Q9UBV8 284 aaKnown RBP13.06□□□□□ -0.32
TNXB-208ENST00000611016 TRAV24A0A0B4J272 114 aa13.05□□□□□ -0.32
TNXB-208ENST00000611016 LINC01549A6NIU2 74 aa13.05□□□□□ -0.32
TNXB-208ENST00000611016 VCX2Q9H322 139 aa13.05□□□□□ -0.32
TNXB-208ENST00000611016 IZUMO1RA6ND01 250 aa13.05□□□□□ -0.32
TNXB-208ENST00000611016 UPK2O00526 184 aa13.05□□□□□ -0.32
TNXB-208ENST00000611016 ASCL2Q99929 193 aa13.05□□□□□ -0.32
TNXB-208ENST00000611016 PSMB11A5LHX3 300 aa13.05□□□□□ -0.32
TNXB-208ENST00000611016 C18orf12Q96KH6 178 aa13.05□□□□□ -0.32
TNXB-208ENST00000611016 GREB1Q4ZG55 1949 aa13.05□□□□□ -0.32
TNXB-208ENST00000611016 TRAV40A0A0B4J280 105 aa13.05□□□□□ -0.32
TNXB-208ENST00000611016 REC114Q7Z4M0 266 aa13.05□□□□□ -0.32
TNXB-208ENST00000611016 C11orf44Q8N8P7 122 aa13.05□□□□□ -0.32
TNXB-208ENST00000611016 RNASE1P07998 156 aaKnown RBP13.05□□□□□ -0.32
TNXB-208ENST00000611016 SRP19P09132 144 aaKnown RBP13.05□□□□□ -0.32
TNXB-208ENST00000611016 RNASE4P34096 147 aaKnown RBP13.05□□□□□ -0.32
TNXB-208ENST00000611016 SUMO2P61956 95 aaKnown RBP13.05□□□□□ -0.32
TNXB-208ENST00000611016 THADAQ6YHU6 1953 aa13.04□□□□□ -0.32
TNXB-208ENST00000611016 GATA2P23769 480 aaPredicted RBP13.04□□□□□ -0.32
TNXB-208ENST00000611016 MORN2Q502X0 79 aa13.04□□□□□ -0.32
TNXB-208ENST00000611016 TTC9CQ8N5M4 171 aa13.04□□□□□ -0.32
TNXB-208ENST00000611016 DPRXA6NFQ7 191 aa13.04□□□□□ -0.32
TNXB-208ENST00000611016 ZNF525Q8N782 197 aa13.04□□□□□ -0.32
TNXB-208ENST00000611016 PARD6GQ9BYG4 376 aaPredicted RBP13.04□□□□□ -0.32
TNXB-208ENST00000611016 A8MXK9 166 aa13.04□□□□□ -0.32
TNXB-208ENST00000611016 DUSP14O95147 198 aaKnown RBP13.04□□□□□ -0.32
TNXB-208ENST00000611016 FOXG1P55316 489 aaPredicted RBP13.04□□□□□ -0.32
TNXB-208ENST00000611016 Q0VFX4 171 aa13.04□□□□□ -0.32
TNXB-208ENST00000611016 OTX1P32242 354 aaPredicted RBP13.03□□□□□ -0.32
TNXB-208ENST00000611016 ZNF497Q6ZNH5 498 aa13.03□□□□□ -0.32
TNXB-208ENST00000611016 GGNQ86UU5 652 aa13.03□□□□□ -0.32
TNXB-208ENST00000611016 PLSCR4Q9NRQ2 329 aa13.03□□□□□ -0.32
TNXB-208ENST00000611016 LYPD3O95274 346 aa13.03□□□□□ -0.32
TNXB-208ENST00000611016 SRSF6Q13247 344 aaKnown RBP13.03□□□□□ -0.32
TNXB-208ENST00000611016 C15orf61A6NNL5 157 aa13.03□□□□□ -0.32
TNXB-208ENST00000611016 CACNG7P62955 275 aa13.03□□□□□ -0.32
TNXB-208ENST00000611016 ZNF672Q499Z4 452 aaPredicted RBP13.03□□□□□ -0.32
TNXB-208ENST00000611016 ZP1P60852 638 aa13.03□□□□□ -0.32
TNXB-208ENST00000611016 NSUN5P1Q3KNT7 163 aa13.03□□□□□ -0.32
TNXB-208ENST00000611016 TCRBV4S1A1TA0A5B7 111 aa13.02□□□□□ -0.32
TNXB-208ENST00000611016 C1QTNF9BB2RNN3 333 aa13.02□□□□□ -0.32
TNXB-208ENST00000611016 DSCR9P59020 149 aa13.02□□□□□ -0.32
TNXB-208ENST00000611016 LEMD1Q68G75 181 aa13.02□□□□□ -0.32
TNXB-208ENST00000611016 MUC21A0A0G2JKD1 596 aa13.02□□□□□ -0.32
TNXB-208ENST00000611016 MUC21A0A140T8X8 626 aa13.02□□□□□ -0.32
TNXB-208ENST00000611016 EFNA2O43921 213 aa13.02□□□□□ -0.32
TNXB-208ENST00000611016 MUC21Q5SSG8 566 aa13.02□□□□□ -0.32
TNXB-208ENST00000611016 C17orf82Q86X59 251 aaPredicted RBP13.02□□□□□ -0.32
TNXB-208ENST00000611016 IGKV1-9A0A0C4DH69 117 aa13.02□□□□□ -0.33
TNXB-208ENST00000611016 HOXA5P20719 270 aa13.02□□□□□ -0.33
TNXB-208ENST00000611016 FER1L6-AS1Q8NA97 138 aa13.02□□□□□ -0.33
TNXB-208ENST00000611016 IL18BPO95998 194 aa13.02□□□□□ -0.33
TNXB-208ENST00000611016 CMC4P56277 68 aaPredicted RBP13.02□□□□□ -0.33
TNXB-208ENST00000611016 NYNRINQ9P2P1 1898 aaKnown RBP13.02□□□□□ -0.33
TNXB-208ENST00000611016 ORMDL3Q8N138 153 aa13.02□□□□□ -0.33
TNXB-208ENST00000611016 BIVMQ86UB2 503 aa13.01□□□□□ -0.33
TNXB-208ENST00000611016 SCGB3A1Q96QR1 104 aa13.01□□□□□ -0.33
TNXB-208ENST00000611016 ZNF319Q9P2F9 582 aa13.01□□□□□ -0.33
TNXB-208ENST00000611016 A0A087WV48 116 aa13.01□□□□□ -0.33
TNXB-208ENST00000611016 FAM89BQ8N5H3 189 aa13.01□□□□□ -0.33
TNXB-208ENST00000611016 TIMM23O14925 209 aa13.01□□□□□ -0.33
TNXB-208ENST00000611016 MIR17HGQ75NE6 70 aa13.01□□□□□ -0.33
TNXB-208ENST00000611016 STHQ8IWL8 128 aa13.01□□□□□ -0.33
TNXB-208ENST00000611016 C8orf46Q8TAG6 207 aa13.01□□□□□ -0.33
TNXB-208ENST00000611016 Q9H3A6 140 aa13.01□□□□□ -0.33
TNXB-208ENST00000611016 JKAMPQ9P055 326 aa13.01□□□□□ -0.33
TNXB-208ENST00000611016 SNRNP200O75643 2136 aaKnown RBP13.01□□□□□ -0.33
TNXB-208ENST00000611016 IGKV1D-13A0A0B4J2D9 117 aa13.01□□□□□ -0.33
TNXB-208ENST00000611016 IGKV1-13P0DP09 117 aa13.01□□□□□ -0.33
TNXB-208ENST00000611016 LINC01559Q495D7 138 aa13.01□□□□□ -0.33
TNXB-208ENST00000611016 SPOCK3Q9BQ16 436 aa13.01□□□□□ -0.33
TNXB-208ENST00000611016 TRGV2A0A075B6R0 118 aa13.01□□□□□ -0.33
TNXB-208ENST00000611016 LDLRAD2Q5SZI1 272 aa13.01□□□□□ -0.33
TNXB-208ENST00000611016 GLMPQ8WWB7 406 aa13.01□□□□□ -0.33
TNXB-208ENST00000611016 CBLN1P23435 193 aa13□□□□□ -0.33
TNXB-208ENST00000611016 EFNA4P52798 201 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms