RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 MCUBQ9NWR8 336 aa14.54□□□□□ -0.08
TCF3-219ENST00000610756 MLXQ9UH92 298 aa14.54□□□□□ -0.08
TCF3-219ENST00000610756 KCNIP3Q9Y2W7 256 aa14.54□□□□□ -0.08
TCF3-219ENST00000610756 TMEM56-RWDD3S4R434 201 aa14.54□□□□□ -0.08
TCF3-219ENST00000610756 V9GYH0 126 aa14.54□□□□□ -0.08
TCF3-219ENST00000610756 A0A0G2JRQ6 117 aa14.53□□□□□ -0.08
TCF3-219ENST00000610756 NDUFA4O00483 81 aa14.53□□□□□ -0.08
TCF3-219ENST00000610756 SNCAP37840 140 aa14.53□□□□□ -0.08
TCF3-219ENST00000610756 ETV6P41212 452 aa14.53□□□□□ -0.08
TCF3-219ENST00000610756 MFAP4P55083 255 aa14.53□□□□□ -0.08
TCF3-219ENST00000610756 PYDC2Q56P42 97 aa14.53□□□□□ -0.08
TCF3-219ENST00000610756 Q56UQ5 140 aa14.53□□□□□ -0.08
TCF3-219ENST00000610756 PVRIGQ6DKI7 326 aa14.53□□□□□ -0.08
TCF3-219ENST00000610756 CCDC190Q86UF4 302 aa14.53□□□□□ -0.08
TCF3-219ENST00000610756 LHFPL5Q8TAF8 219 aa14.53□□□□□ -0.08
TCF3-219ENST00000610756 TMEM190Q8WZ59 177 aa14.53□□□□□ -0.08
TCF3-219ENST00000610756 GALNT14Q96FL9 552 aa14.53□□□□□ -0.08
TCF3-219ENST00000610756 PDCD10Q9BUL8 212 aa14.53□□□□□ -0.08
TCF3-219ENST00000610756 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.53□□□□□ -0.08
TCF3-219ENST00000610756 MT-CO2P00403 227 aa14.52□□□□□ -0.08
TCF3-219ENST00000610756 AP3S2P59780 193 aa14.52□□□□□ -0.08
TCF3-219ENST00000610756 KLF9Q13886 244 aaPredicted RBP14.52□□□□□ -0.08
TCF3-219ENST00000610756 SPINK9Q5DT21 86 aa14.52□□□□□ -0.08
TCF3-219ENST00000610756 SLC35G3Q8N808 338 aa14.52□□□□□ -0.08
TCF3-219ENST00000610756 UBAC2Q8NBM4 344 aa14.52□□□□□ -0.08
TCF3-219ENST00000610756 OR52E5Q8NH55 327 aa14.52□□□□□ -0.08
TCF3-219ENST00000610756 RNASE11Q8TAA1 199 aaKnown RBP14.52□□□□□ -0.08
TCF3-219ENST00000610756 TRIM63Q969Q1 353 aa14.52□□□□□ -0.08
TCF3-219ENST00000610756 WDR89Q96FK6 387 aaPredicted RBP14.52□□□□□ -0.08
TCF3-219ENST00000610756 NEURL2Q9BR09 285 aa14.52□□□□□ -0.08
TCF3-219ENST00000610756 TUBA4BQ9H853 241 aa14.52□□□□□ -0.08
TCF3-219ENST00000610756 ZMAT4Q9H898 229 aa14.52□□□□□ -0.08
TCF3-219ENST00000610756 STAB2Q8WWQ8 2551 aa14.52□□□□□ -0.09
TCF3-219ENST00000610756 TRAV25A0A0B4J276 109 aa14.51□□□□□ -0.09
TCF3-219ENST00000610756 K7EMT4 169 aa14.51□□□□□ -0.09
TCF3-219ENST00000610756 NUPL2O15504 423 aaKnown RBP14.51□□□□□ -0.09
TCF3-219ENST00000610756 FAUP35544 74 aaKnown RBP14.51□□□□□ -0.09
TCF3-219ENST00000610756 SUB1P53999 127 aaKnown RBP eCLIP14.51□□□□□ -0.096e-7■□□□□ 10.7
TCF3-219ENST00000610756 CD81P60033 236 aa14.51□□□□□ -0.09
TCF3-219ENST00000610756 SPCS3P61009 180 aa14.51□□□□□ -0.09
TCF3-219ENST00000610756 ZNF79Q15937 498 aa14.51□□□□□ -0.09
TCF3-219ENST00000610756 GUCA2BQ16661 112 aa14.51□□□□□ -0.09
TCF3-219ENST00000610756 TMEM268Q5VZI3 342 aa14.51□□□□□ -0.09
TCF3-219ENST00000610756 TMEM61Q8N0U2 210 aa14.51□□□□□ -0.09
TCF3-219ENST00000610756 TOMM5Q8N4H5 51 aa14.51□□□□□ -0.09
TCF3-219ENST00000610756 DEDD2Q8WXF8 326 aa14.51□□□□□ -0.09
TCF3-219ENST00000610756 IL22RA2Q969J5 263 aa14.51□□□□□ -0.09
TCF3-219ENST00000610756 TMEM230Q96A57 120 aa14.51□□□□□ -0.09
TCF3-219ENST00000610756 TM2D3Q9BRN9 247 aa14.51□□□□□ -0.09
TCF3-219ENST00000610756 DAZ1Q9NQZ3 744 aaKnown RBP14.51□□□□□ -0.09
TCF3-219ENST00000610756 CD7P09564 240 aa14.5□□□□□ -0.09
TCF3-219ENST00000610756 RELQ04864 619 aaPredicted RBP14.5□□□□□ -0.09
TCF3-219ENST00000610756 TMEM187Q14656 261 aa14.5□□□□□ -0.09
TCF3-219ENST00000610756 GPR146Q96CH1 333 aa14.5□□□□□ -0.09
TCF3-219ENST00000610756 RCHY1Q96PM5 261 aa14.5□□□□□ -0.09
TCF3-219ENST00000610756 RNASE2P10153 161 aaKnown RBP14.49□□□□□ -0.09
TCF3-219ENST00000610756 BTNL8Q6UX41 500 aa14.49□□□□□ -0.09
TCF3-219ENST00000610756 LINC00322Q6ZN03 302 aaPredicted RBP14.49□□□□□ -0.09
TCF3-219ENST00000610756 PINX1Q96BK5 328 aaKnown RBP14.49□□□□□ -0.09
TCF3-219ENST00000610756 ENY2Q9NPA8 101 aa14.49□□□□□ -0.09
TCF3-219ENST00000610756 CACFD1Q9UGQ2 172 aa14.49□□□□□ -0.09
TCF3-219ENST00000610756 C15orf62A8K5M9 175 aa14.48□□□□□ -0.09
TCF3-219ENST00000610756 CORTO00230 105 aa14.48□□□□□ -0.09
TCF3-219ENST00000610756 IGHV3-48P01763 117 aa14.48□□□□□ -0.09
TCF3-219ENST00000610756 AKR1C4P17516 323 aa14.48□□□□□ -0.09
TCF3-219ENST00000610756 NPBWR1P48145 328 aa14.48□□□□□ -0.09
TCF3-219ENST00000610756 HOXA1P49639 335 aaPredicted RBP14.48□□□□□ -0.09
TCF3-219ENST00000610756 SUPT4H1P63272 117 aaKnown RBP14.48□□□□□ -0.09
TCF3-219ENST00000610756 HAGHQ16775 308 aa14.48□□□□□ -0.09
TCF3-219ENST00000610756 BSXQ3C1V8 233 aa14.48□□□□□ -0.09
TCF3-219ENST00000610756 ANKRD55Q3KP44 614 aa14.48□□□□□ -0.09
TCF3-219ENST00000610756 SPANXN2Q5MJ10 180 aa14.48□□□□□ -0.09
TCF3-219ENST00000610756 RBPMS2Q6ZRY4 209 aaKnown RBP14.48□□□□□ -0.09
TCF3-219ENST00000610756 SLC16A13Q7RTY0 426 aa14.48□□□□□ -0.09
TCF3-219ENST00000610756 DUSP18Q8NEJ0 188 aa14.48□□□□□ -0.09
TCF3-219ENST00000610756 ZNF414Q96IQ9 312 aa14.48□□□□□ -0.09
TCF3-219ENST00000610756 CACNG5Q9UF02 275 aa14.48□□□□□ -0.09
TCF3-219ENST00000610756 SELENOKQ9Y6D0 94 aa14.48□□□□□ -0.09
TCF3-219ENST00000610756 OR11H12B2RN74 326 aa14.47□□□□□ -0.09
TCF3-219ENST00000610756 GNG7O60262 68 aa14.47□□□□□ -0.09
TCF3-219ENST00000610756 OR10C1Q96KK4 312 aa14.47□□□□□ -0.09
TCF3-219ENST00000610756 SLC25A21Q9BQT8 299 aaPredicted RBP14.47□□□□□ -0.09
TCF3-219ENST00000610756 C20orf24Q9BUV8 137 aa14.47□□□□□ -0.09
TCF3-219ENST00000610756 SCAF4O95104 1147 aaKnown RBP14.46□□□□□ -0.09
TCF3-219ENST00000610756 DEFB125Q8N687 156 aa14.46□□□□□ -0.09
TCF3-219ENST00000610756 OR52B4Q8NGK2 314 aa14.46□□□□□ -0.09
TCF3-219ENST00000610756 A0A0B4J2A0 478 aa14.45□□□□□ -0.1
TCF3-219ENST00000610756 PIGBOS1A0A0B4J2F0 54 aa14.45□□□□□ -0.1
TCF3-219ENST00000610756 TSPAN4O14817 238 aa14.45□□□□□ -0.1
TCF3-219ENST00000610756 TMEM50AO95807 157 aa14.45□□□□□ -0.1
TCF3-219ENST00000610756 ANXA3P12429 323 aa14.45□□□□□ -0.1
TCF3-219ENST00000610756 HTR2BP41595 481 aa14.45□□□□□ -0.1
TCF3-219ENST00000610756 TMEM128Q5BJH2 165 aa14.45□□□□□ -0.1
TCF3-219ENST00000610756 NMSQ5H8A3 153 aa14.45□□□□□ -0.1
TCF3-219ENST00000610756 LAMTOR1Q6IAA8 161 aa14.45□□□□□ -0.1
TCF3-219ENST00000610756 NDUFA13Q9P0J0 144 aa14.45□□□□□ -0.1
TCF3-219ENST00000610756 SHPKQ9UHJ6 478 aa14.45□□□□□ -0.1
TCF3-219ENST00000610756 SMPXQ9UHP9 88 aa14.45□□□□□ -0.1
TCF3-219ENST00000610756 IGHV3OR16-8A0A075B7F1 116 aa14.44□□□□□ -0.1
TCF3-219ENST00000610756 YIF1AO95070 293 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms