RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 MMD2Q8IY49 270 aa22.57■■□□□ 1.2
CSPG5-205ENST00000610462 FUT9Q9Y231 359 aa22.57■■□□□ 1.2
CSPG5-205ENST00000610462 COL6A6A6NMZ7 2263 aa22.56■■□□□ 1.2
CSPG5-205ENST00000610462 FOXH1O75593 365 aa22.56■■□□□ 1.2
CSPG5-205ENST00000610462 MIR17HGQ75NE6 70 aa22.56■■□□□ 1.2
CSPG5-205ENST00000610462 PNKDQ8N490 385 aa22.56■■□□□ 1.2
CSPG5-205ENST00000610462 OR2T6Q8NHC8 308 aa22.56■■□□□ 1.2
CSPG5-205ENST00000610462 NBASA2RRP1 2371 aa22.56■■□□□ 1.2
CSPG5-205ENST00000610462 PRSS8Q16651 343 aa22.56■■□□□ 1.2
CSPG5-205ENST00000610462 RPEQ96AT9 228 aa22.56■■□□□ 1.2
CSPG5-205ENST00000610462 C19orf24Q9BVV8 132 aa22.56■■□□□ 1.2
CSPG5-205ENST00000610462 LY6LH3BQJ8 138 aa22.55■■□□□ 1.2
CSPG5-205ENST00000610462 ACTL6BO94805 426 aa22.55■■□□□ 1.2
CSPG5-205ENST00000610462 KIAA0141Q14154 515 aaPredicted RBP22.55■■□□□ 1.2
CSPG5-205ENST00000610462 DOK5Q9P104 306 aa22.55■■□□□ 1.2
CSPG5-205ENST00000610462 YTHDF2Q9Y5A9 579 aaKnown RBP22.55■■□□□ 1.2
CSPG5-205ENST00000610462 NDUFB4O95168 129 aa22.54■■□□□ 1.2
CSPG5-205ENST00000610462 GATA2P23769 480 aaPredicted RBP22.54■■□□□ 1.2
CSPG5-205ENST00000610462 CNTFRP26992 372 aa22.54■■□□□ 1.2
CSPG5-205ENST00000610462 PSG5Q15238 335 aa22.54■■□□□ 1.2
CSPG5-205ENST00000610462 ACY3Q96HD9 319 aa22.54■■□□□ 1.2
CSPG5-205ENST00000610462 FAM210BQ96KR6 192 aa22.54■■□□□ 1.2
CSPG5-205ENST00000610462 CHODLQ9H9P2 273 aa22.54■■□□□ 1.2
CSPG5-205ENST00000610462 MRPL41Q8IXM3 137 aaKnown RBP22.54■■□□□ 1.2
CSPG5-205ENST00000610462 FNDC4Q9H6D8 234 aaPredicted RBP22.54■■□□□ 1.2
CSPG5-205ENST00000610462 TRBV24-1A0A075B6N3 115 aa22.53■■□□□ 1.2
CSPG5-205ENST00000610462 SIGLEC9Q9Y336 463 aa22.53■■□□□ 1.2
CSPG5-205ENST00000610462 TPRP12270 2363 aaKnown RBP22.53■■□□□ 1.2
CSPG5-205ENST00000610462 OR5G3P0C626 314 aa22.53■■□□□ 1.2
CSPG5-205ENST00000610462 RPL27AP46776 148 aaKnown RBP22.53■■□□□ 1.2
CSPG5-205ENST00000610462 ANAPC16Q96DE5 110 aa22.53■■□□□ 1.2
CSPG5-205ENST00000610462 TECRQ9NZ01 308 aaKnown RBP22.53■■□□□ 1.2
CSPG5-205ENST00000610462 IGLC7A0M8Q6 106 aa22.52■■□□□ 1.2
CSPG5-205ENST00000610462 RELNP78509 3460 aa22.52■■□□□ 1.19
CSPG5-205ENST00000610462 H7BYZ3 331 aa22.51■■□□□ 1.19
CSPG5-205ENST00000610462 TNXAQ16473 311 aa22.51■■□□□ 1.19
CSPG5-205ENST00000610462 DERL1Q9BUN8 251 aa22.51■■□□□ 1.19
CSPG5-205ENST00000610462 SSBP3Q9BWW4 388 aaPredicted RBP22.51■■□□□ 1.19
CSPG5-205ENST00000610462 REG1AP05451 166 aa22.51■■□□□ 1.19
CSPG5-205ENST00000610462 PFN1P07737 140 aaKnown RBP22.5■■□□□ 1.19
CSPG5-205ENST00000610462 ARF6P62330 175 aa22.5■■□□□ 1.19
CSPG5-205ENST00000610462 C4orf17Q53FE4 359 aa22.5■■□□□ 1.19
CSPG5-205ENST00000610462 PVRIGQ6DKI7 326 aa22.5■■□□□ 1.19
CSPG5-205ENST00000610462 RNF5Q99942 180 aa22.5■■□□□ 1.19
CSPG5-205ENST00000610462 TMEM167BQ9NRX6 74 aa22.5■■□□□ 1.19
CSPG5-205ENST00000610462 ARL2-SNX15V9GYD0 113 aa22.5■■□□□ 1.19
CSPG5-205ENST00000610462 LOC105371242A0A075B767 164 aa22.5■■□□□ 1.19
CSPG5-205ENST00000610462 SCO2A0A1W2PP80 73 aa22.5■■□□□ 1.19
CSPG5-205ENST00000610462 A0A1W2PPR1 153 aa22.5■■□□□ 1.19
CSPG5-205ENST00000610462 TGOLN2O43493 480 aa22.5■■□□□ 1.19
CSPG5-205ENST00000610462 COMPP49747 757 aaPredicted RBP22.5■■□□□ 1.19
CSPG5-205ENST00000610462 LINC01551Q86U37 167 aa22.5■■□□□ 1.19
CSPG5-205ENST00000610462 ZNF114Q8NC26 417 aa22.5■■□□□ 1.19
CSPG5-205ENST00000610462 OR11H6Q8NGC7 330 aa22.5■■□□□ 1.19
CSPG5-205ENST00000610462 NAV3Q8IVL0 2385 aa22.49■■□□□ 1.19
CSPG5-205ENST00000610462 LRBAP50851 2863 aa22.49■■□□□ 1.19
CSPG5-205ENST00000610462 M0R1W7 72 aa22.49■■□□□ 1.19
CSPG5-205ENST00000610462 CTAG1AP78358 180 aa22.49■■□□□ 1.19
CSPG5-205ENST00000610462 THAP8Q8NA92 274 aa22.49■■□□□ 1.19
CSPG5-205ENST00000610462 NPIPB3Q92617 1050 aa22.49■■□□□ 1.19
CSPG5-205ENST00000610462 PLXNB1O43157 2135 aa22.49■■□□□ 1.19
CSPG5-205ENST00000610462 TAS2R45P59539 299 aa22.48■■□□□ 1.19
CSPG5-205ENST00000610462 SSBP2P81877 361 aaPredicted RBP22.48■■□□□ 1.19
CSPG5-205ENST00000610462 TPTE2P1Q5T6R2 138 aa22.48■■□□□ 1.19
CSPG5-205ENST00000610462 PQLC2Q6ZP29 291 aa22.48■■□□□ 1.19
CSPG5-205ENST00000610462 PPP1R27Q86WC6 154 aa22.48■■□□□ 1.19
CSPG5-205ENST00000610462 ITLN2Q8WWU7 325 aaPredicted RBP22.48■■□□□ 1.19
CSPG5-205ENST00000610462 OR5B12Q96R08 314 aa22.48■■□□□ 1.19
CSPG5-205ENST00000610462 PSMB11A5LHX3 300 aa22.48■■□□□ 1.19
CSPG5-205ENST00000610462 AREGP15514 252 aa22.48■■□□□ 1.19
CSPG5-205ENST00000610462 GALR1P47211 349 aa22.48■■□□□ 1.19
CSPG5-205ENST00000610462 TMEM37Q8WXS4 190 aa22.48■■□□□ 1.19
CSPG5-205ENST00000610462 RNF2Q99496 336 aa22.48■■□□□ 1.19
CSPG5-205ENST00000610462 MRPL32Q9BYC8 188 aaKnown RBP22.48■■□□□ 1.19
CSPG5-205ENST00000610462 HTR1DP28221 377 aa22.47■■□□□ 1.19
CSPG5-205ENST00000610462 LDLRAD2Q5SZI1 272 aa22.47■■□□□ 1.19
CSPG5-205ENST00000610462 ETFRF1Q6IPR1 90 aa22.47■■□□□ 1.19
CSPG5-205ENST00000610462 ZNF503Q96F45 646 aa22.47■■□□□ 1.19
CSPG5-205ENST00000610462 UHRF2Q96PU4 802 aa22.47■■□□□ 1.19
CSPG5-205ENST00000610462 PYGO2Q9BRQ0 406 aa22.47■■□□□ 1.19
CSPG5-205ENST00000610462 HRNRQ86YZ3 2850 aaPredicted RBP22.47■■□□□ 1.19
CSPG5-205ENST00000610462 HIVEP3Q5T1R4 2406 aa22.47■■□□□ 1.19
CSPG5-205ENST00000610462 TCRBV4S1A1TA0A5B7 111 aa22.46■■□□□ 1.19
CSPG5-205ENST00000610462 S100PP25815 95 aa22.46■■□□□ 1.19
CSPG5-205ENST00000610462 OR5T1Q8NG75 326 aa22.46■■□□□ 1.19
CSPG5-205ENST00000610462 C11orf52Q96A22 123 aa22.46■■□□□ 1.19
CSPG5-205ENST00000610462 CHD8Q9HCK8 2581 aa22.46■■□□□ 1.19
CSPG5-205ENST00000610462 IGKV1D-37A0A075B6S9 117 aa22.46■■□□□ 1.19
CSPG5-205ENST00000610462 TRGC2P03986 189 aa22.46■■□□□ 1.19
CSPG5-205ENST00000610462 HOXA5P20719 270 aa22.46■■□□□ 1.19
CSPG5-205ENST00000610462 UQCRFS1P47985 274 aa22.46■■□□□ 1.19
CSPG5-205ENST00000610462 HCP5Q6MZN7 132 aa22.46■■□□□ 1.19
CSPG5-205ENST00000610462 NECAP1Q8NC96 275 aa22.46■■□□□ 1.19
CSPG5-205ENST00000610462 SLC25A33Q9BSK2 321 aa22.46■■□□□ 1.19
CSPG5-205ENST00000610462 MRPL36Q9P0J6 103 aaKnown RBP22.46■■□□□ 1.19
CSPG5-205ENST00000610462 DPM3Q9P2X0 92 aa22.46■■□□□ 1.19
CSPG5-205ENST00000610462 CRYGCP07315 174 aa22.45■■□□□ 1.18
CSPG5-205ENST00000610462 C8orf88P0DMB2 117 aa22.45■■□□□ 1.18
CSPG5-205ENST00000610462 CD99P14209 185 aa22.45■■□□□ 1.18
CSPG5-205ENST00000610462 FBXL15Q9H469 300 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms