RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 RRHO14718 337 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 IGF1P05019 195 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 MYOD1P15172 320 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 KRTAP10-11P60412 298 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 BAXQ07812 192 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 TMEM267Q0VDI3 215 aaPredicted RBP8.99□□□□□ -0.97
LINC00539-204ENST00000608957 PLGLAQ15195 96 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 PRSS8Q16651 343 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 C5orf64Q2M2E5 130 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 STX12Q86Y82 276 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 RNF152Q8N8N0 203 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 KLHL30-AS1Q8NEE0 82 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 OR1L8Q8NGR8 309 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 RAX2Q96IS3 184 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 P2RX4Q99571 388 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 GON7Q9BXV9 100 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 COMMD5Q9GZQ3 224 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 FBXL15Q9H469 300 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 SLA2Q9H6Q3 261 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 ENY2Q9NPA8 101 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 FBXL17Q9UF56 701 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 FBXO7Q9Y3I1 522 aa8.99□□□□□ -0.97
LINC00539-204ENST00000608957 TEX50A0A1B0GTY4 177 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 G3V318 75 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 ATP6V0E1O15342 81 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 IGHG4P01861 327 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 HLA-DRB1P01911 266 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 PSMB8P28062 276 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 PPIFP30405 207 aaKnown RBP8.98□□□□□ -0.97
LINC00539-204ENST00000608957 MAS1LP35410 378 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 SLC35B1P78383 322 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 FOXE3Q13461 319 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 KIAA0141Q14154 515 aaPredicted RBP8.98□□□□□ -0.97
LINC00539-204ENST00000608957 MRGPRG-AS1Q2M3A8 158 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 DEFB136Q30KP8 78 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 C19orf54Q5BKX5 351 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 SPANXN5Q5MJ07 72 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 C10orf55Q5SWW7 151 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 TEX38Q6PEX7 206 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 SLC51BQ86UW2 128 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 PPP1R27Q86WC6 154 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 COMMD1Q8N668 190 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 OR4C12Q96R67 309 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 HINT2Q9BX68 163 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 HIPK2Q9H2X6 1198 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 HEYLQ9NQ87 328 aaPredicted RBP8.98□□□□□ -0.97
LINC00539-204ENST00000608957 ZNF580Q9UK33 172 aa8.98□□□□□ -0.97
LINC00539-204ENST00000608957 A0A1W2PN81 502 aa8.97□□□□□ -0.97
LINC00539-204ENST00000608957 NUDT19A8MXV4 375 aa8.97□□□□□ -0.97
LINC00539-204ENST00000608957 FCN1O00602 326 aa8.97□□□□□ -0.97
LINC00539-204ENST00000608957 TAAR5O14804 337 aa8.97□□□□□ -0.97
LINC00539-204ENST00000608957 CST7O76096 145 aa8.97□□□□□ -0.97
LINC00539-204ENST00000608957 ACTL6BO94805 426 aa8.97□□□□□ -0.97
LINC00539-204ENST00000608957 SCAF4O95104 1147 aaKnown RBP8.97□□□□□ -0.97
LINC00539-204ENST00000608957 METTL15P1P0C7V9 234 aa8.97□□□□□ -0.97
LINC00539-204ENST00000608957 CHRNA7P36544 502 aa8.97□□□□□ -0.97
LINC00539-204ENST00000608957 RPL27AP46776 148 aaKnown RBP8.97□□□□□ -0.97
LINC00539-204ENST00000608957 SULT1A1P50225 295 aa8.97□□□□□ -0.97
LINC00539-204ENST00000608957 RPP30P78346 268 aaKnown RBP8.97□□□□□ -0.97
LINC00539-204ENST00000608957 IFITM2Q01629 132 aa8.97□□□□□ -0.97
LINC00539-204ENST00000608957 NHLH2Q02577 135 aa8.97□□□□□ -0.97
LINC00539-204ENST00000608957 PJVKQ0ZLH3 352 aa8.97□□□□□ -0.97
LINC00539-204ENST00000608957 TNXAQ16473 311 aa8.97□□□□□ -0.97
LINC00539-204ENST00000608957 TMEM14EPQ6UXP3 125 aa8.97□□□□□ -0.97
LINC00539-204ENST00000608957 MYOZ3Q8TDC0 251 aa8.97□□□□□ -0.97
LINC00539-204ENST00000608957 BSCL2Q96G97 398 aaPredicted RBP8.97□□□□□ -0.97
LINC00539-204ENST00000608957 RCC1LQ96I51 464 aaKnown RBP8.97□□□□□ -0.97
LINC00539-204ENST00000608957 ZNF471Q9BX82 626 aaPredicted RBP8.97□□□□□ -0.97
LINC00539-204ENST00000608957 SMIM3Q9BZL3 60 aa8.97□□□□□ -0.97
LINC00539-204ENST00000608957 KLK15Q9H2R5 256 aa8.97□□□□□ -0.97
LINC00539-204ENST00000608957 NDUFA4L2Q9NRX3 87 aa8.97□□□□□ -0.97
LINC00539-204ENST00000608957 STRAPQ9Y3F4 350 aaKnown RBP8.97□□□□□ -0.97
LINC00539-204ENST00000608957 CGB1A6NKQ9 187 aa8.96□□□□□ -0.98
LINC00539-204ENST00000608957 C15orf62A8K5M9 175 aa8.96□□□□□ -0.98
LINC00539-204ENST00000608957 INS-IGF2F8WCM5 200 aa8.96□□□□□ -0.98
LINC00539-204ENST00000608957 K7EIL1 84 aa8.96□□□□□ -0.98
LINC00539-204ENST00000608957 SOX15O60248 233 aa8.96□□□□□ -0.98
LINC00539-204ENST00000608957 CA2P00918 260 aa8.96□□□□□ -0.98
LINC00539-204ENST00000608957 ELANEP08246 267 aa8.96□□□□□ -0.98
LINC00539-204ENST00000608957 EGR2P11161 476 aaPredicted RBP8.96□□□□□ -0.98
LINC00539-204ENST00000608957 HOXD3P31249 432 aaPredicted RBP8.96□□□□□ -0.98
LINC00539-204ENST00000608957 MYCNOSP40205 109 aa8.96□□□□□ -0.98
LINC00539-204ENST00000608957 GNB1P62873 340 aa8.96□□□□□ -0.98
LINC00539-204ENST00000608957 TMEM217Q8N7C4 229 aa8.96□□□□□ -0.98
LINC00539-204ENST00000608957 SLC24A4Q8NFF2 622 aa8.96□□□□□ -0.98
LINC00539-204ENST00000608957 OR1S2Q8NGQ3 325 aa8.96□□□□□ -0.98
LINC00539-204ENST00000608957 MRAPQ8TCY5 172 aa8.96□□□□□ -0.98
LINC00539-204ENST00000608957 PARP11Q9NR21 331 aa8.96□□□□□ -0.98
LINC00539-204ENST00000608957 CYTL1Q9NRR1 136 aa8.96□□□□□ -0.98
LINC00539-204ENST00000608957 PAIP2BQ9ULR5 123 aaKnown RBP8.96□□□□□ -0.98
LINC00539-204ENST00000608957 CCL24O00175 119 aa8.95□□□□□ -0.98
LINC00539-204ENST00000608957 IFNA10P01566 189 aa8.95□□□□□ -0.98
LINC00539-204ENST00000608957 IGLV1-40P01703 118 aa8.95□□□□□ -0.98
LINC00539-204ENST00000608957 OR8U8P0C7N1 319 aa8.95□□□□□ -0.98
LINC00539-204ENST00000608957 NPY1RP25929 384 aa8.95□□□□□ -0.98
LINC00539-204ENST00000608957 CDX1P47902 265 aaPredicted RBP8.95□□□□□ -0.98
LINC00539-204ENST00000608957 CRIP2P52943 208 aaPredicted RBP8.95□□□□□ -0.98
LINC00539-204ENST00000608957 HBG1P69891 147 aa8.95□□□□□ -0.98
LINC00539-204ENST00000608957 HBG2P69892 147 aa8.95□□□□□ -0.98
LINC00539-204ENST00000608957 SSBP2P81877 361 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms