RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 CXorf65A6NEN9 183 aa5.62□□□□□ -1.51
CUX1-219ENST00000606749 FAM25AB3EWG3 89 aa5.62□□□□□ -1.51
CUX1-219ENST00000606749 FAM25CB3EWG5 89 aa5.62□□□□□ -1.51
CUX1-219ENST00000606749 FAM25GB3EWG6 89 aa5.62□□□□□ -1.51
CUX1-219ENST00000606749 IGKV1-5P01602 117 aa5.62□□□□□ -1.51
CUX1-219ENST00000606749 P0C879 139 aa5.62□□□□□ -1.51
CUX1-219ENST00000606749 PGAM2P15259 253 aa5.62□□□□□ -1.51
CUX1-219ENST00000606749 ATF4P18848 351 aaPredicted RBP5.62□□□□□ -1.51
CUX1-219ENST00000606749 PI3P19957 117 aa5.62□□□□□ -1.51
CUX1-219ENST00000606749 PIGPP57054 158 aa5.62□□□□□ -1.51
CUX1-219ENST00000606749 PMS2P11Q13670 270 aa5.62□□□□□ -1.51
CUX1-219ENST00000606749 ZNF124Q15973 351 aa5.62□□□□□ -1.51
CUX1-219ENST00000606749 MZT2AQ6P582 158 aa5.62□□□□□ -1.51
CUX1-219ENST00000606749 CEMP1Q6PRD7 247 aaPredicted RBP5.62□□□□□ -1.51
CUX1-219ENST00000606749 LHFPL1Q86WI0 220 aa5.62□□□□□ -1.51
CUX1-219ENST00000606749 LILRB2Q8N423 598 aa5.62□□□□□ -1.51
CUX1-219ENST00000606749 PINX1Q96BK5 328 aaKnown RBP5.62□□□□□ -1.51
CUX1-219ENST00000606749 ZNF486Q96H40 463 aaPredicted RBP5.62□□□□□ -1.51
CUX1-219ENST00000606749 TP53RKQ96S44 253 aa5.62□□□□□ -1.51
CUX1-219ENST00000606749 CSTL1Q9H114 145 aa5.62□□□□□ -1.51
CUX1-219ENST00000606749 IGKV3-7A0A075B6H7 116 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 IGHV3OR16-13A0A075B7E8 117 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 IGHV3-74A0A0B4J1X5 117 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 C3orf85A0A1B0GTC6 90 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 NUPR2A6NF83 97 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 INS-IGF2F8WCM5 200 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 ST8SIA3O43173 380 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 GNG7O60262 68 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 TMEM50AO95807 157 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 LY6G6CO95867 125 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 CD3DP04234 171 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 ZNF182P17025 639 aaPredicted RBP5.61□□□□□ -1.51
CUX1-219ENST00000606749 SNCAP37840 140 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 NPBWR1P48145 328 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 TFPI2P48307 235 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 PAFAH1B2P68402 229 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 CTF1Q16619 201 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 SPINK9Q5DT21 86 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 RNASE12Q5GAN4 147 aaKnown RBP5.61□□□□□ -1.51
CUX1-219ENST00000606749 RNASE10Q5GAN6 216 aaKnown RBP5.61□□□□□ -1.51
CUX1-219ENST00000606749 PVRIGQ6DKI7 326 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 TOMM20LQ6UXN7 152 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 GBGT1Q8N5D6 347 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 ARRDC1Q8N5I2 433 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 DUSP18Q8NEJ0 188 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 OR4D10Q8NGI6 311 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 OR52I2Q8NH67 350 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 TERB2Q8NHR7 220 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 LINC00476Q8WZB0 136 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 ABHD1Q96SE0 405 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 C6orf62Q9GZU0 229 aaPredicted RBP5.61□□□□□ -1.51
CUX1-219ENST00000606749 NAA50Q9GZZ1 169 aaKnown RBP5.61□□□□□ -1.51
CUX1-219ENST00000606749 VSIRQ9H7M9 311 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 MTFP1Q9UDX5 166 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 HYDINQ4G0P3 5121 aa5.61□□□□□ -1.51
CUX1-219ENST00000606749 DNAH1Q9P2D7 4330 aa5.6□□□□□ -1.51
CUX1-219ENST00000606749 MPTX1A8MV57 137 aa5.6□□□□□ -1.51
CUX1-219ENST00000606749 IFNA17P01571 189 aa5.6□□□□□ -1.51
CUX1-219ENST00000606749 APOHP02749 345 aaPredicted RBP5.6□□□□□ -1.51
CUX1-219ENST00000606749 CD74P04233 296 aa5.6□□□□□ -1.51
CUX1-219ENST00000606749 CD5P06127 495 aa5.6□□□□□ -1.51
CUX1-219ENST00000606749 TBPP20226 339 aa5.6□□□□□ -1.51
CUX1-219ENST00000606749 ETV6P41212 452 aa5.6□□□□□ -1.51
CUX1-219ENST00000606749 SUB1P53999 127 aaKnown RBP eCLIP5.6□□□□□ -1.51
CUX1-219ENST00000606749 MLANAQ16655 118 aa5.6□□□□□ -1.51
CUX1-219ENST00000606749 SP6Q3SY56 376 aa5.6□□□□□ -1.51
CUX1-219ENST00000606749 ZNF600Q6ZNG1 722 aa5.6□□□□□ -1.51
CUX1-219ENST00000606749 TCF24Q7RTU0 167 aa5.6□□□□□ -1.51
CUX1-219ENST00000606749 TMEM229BQ8NBD8 167 aa5.6□□□□□ -1.51
CUX1-219ENST00000606749 ZFAND1Q8TCF1 268 aa5.6□□□□□ -1.51
CUX1-219ENST00000606749 ST8SIA2Q92186 375 aa5.6□□□□□ -1.51
CUX1-219ENST00000606749 AP3S1Q92572 193 aa5.6□□□□□ -1.51
CUX1-219ENST00000606749 GINS3Q9BRX5 216 aa5.6□□□□□ -1.51
CUX1-219ENST00000606749 MS4A6AQ9H2W1 248 aa5.6□□□□□ -1.51
CUX1-219ENST00000606749 ZFAND3Q9H8U3 227 aa5.6□□□□□ -1.51
CUX1-219ENST00000606749 EXTL2Q9UBQ6 330 aa5.6□□□□□ -1.51
CUX1-219ENST00000606749 PUS1Q9Y606 427 aaKnown RBP eCLIP5.6□□□□□ -1.51
CUX1-219ENST00000606749 IGHV3-66A0A0C4DH42 116 aa5.59□□□□□ -1.51
CUX1-219ENST00000606749 A0A0G2JRQ6 117 aa5.59□□□□□ -1.51
CUX1-219ENST00000606749 A0A1B0GU03 582 aa5.59□□□□□ -1.51
CUX1-219ENST00000606749 DNASE2O00115 360 aaPredicted RBP5.59□□□□□ -1.51
CUX1-219ENST00000606749 DFFBO76075 338 aa5.59□□□□□ -1.51
CUX1-219ENST00000606749 ATG12O94817 140 aa5.59□□□□□ -1.51
CUX1-219ENST00000606749 GABARAPO95166 117 aa5.59□□□□□ -1.51
CUX1-219ENST00000606749 RNASE2P10153 161 aaKnown RBP5.59□□□□□ -1.51
CUX1-219ENST00000606749 NPPCP23582 126 aa5.59□□□□□ -1.51
CUX1-219ENST00000606749 UCP1P25874 307 aa5.59□□□□□ -1.51
CUX1-219ENST00000606749 RPL5P46777 297 aaKnown RBP5.59□□□□□ -1.51
CUX1-219ENST00000606749 AKR1C2P52895 323 aa5.59□□□□□ -1.51
CUX1-219ENST00000606749 PPP5CP53041 499 aa5.59□□□□□ -1.51
CUX1-219ENST00000606749 TRIM16LQ309B1 348 aa5.59□□□□□ -1.51
CUX1-219ENST00000606749 Q6ZRM9 215 aa5.59□□□□□ -1.51
CUX1-219ENST00000606749 TMEM217Q8N7C4 229 aa5.59□□□□□ -1.51
CUX1-219ENST00000606749 SLC35G3Q8N808 338 aa5.59□□□□□ -1.51
CUX1-219ENST00000606749 OR13C8Q8NGS7 320 aa5.59□□□□□ -1.51
CUX1-219ENST00000606749 OR4X1Q8NH49 305 aa5.59□□□□□ -1.51
CUX1-219ENST00000606749 C15orf40Q8WUR7 153 aa5.59□□□□□ -1.51
CUX1-219ENST00000606749 GATAD1Q8WUU5 269 aa5.59□□□□□ -1.51
CUX1-219ENST00000606749 PHLDA1Q8WV24 401 aaPredicted RBP5.59□□□□□ -1.51
CUX1-219ENST00000606749 RARRES2Q99969 163 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms