RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 SLC35G3Q8N808 338 aa9.23□□□□□ -0.93
CTSA-210ENST00000606000 ZNF114Q8NC26 417 aa9.23□□□□□ -0.93
CTSA-210ENST00000606000 GLYATL2Q8WU03 294 aa9.23□□□□□ -0.93
CTSA-210ENST00000606000 BSCL2Q96G97 398 aaPredicted RBP9.23□□□□□ -0.93
CTSA-210ENST00000606000 C20orf24Q9BUV8 137 aa9.23□□□□□ -0.93
CTSA-210ENST00000606000 NAA60Q9H7X0 242 aa9.23□□□□□ -0.93
CTSA-210ENST00000606000 GPR132Q9UNW8 380 aa9.23□□□□□ -0.93
CTSA-210ENST00000606000 TEX13DA0A0J9YY54 714 aaPredicted RBP9.22□□□□□ -0.93
CTSA-210ENST00000606000 CRYM-AS1A6NIL9 109 aa9.22□□□□□ -0.93
CTSA-210ENST00000606000 NXPH3O95157 252 aa9.22□□□□□ -0.93
CTSA-210ENST00000606000 IFNA17P01571 189 aa9.22□□□□□ -0.93
CTSA-210ENST00000606000 C8orf88P0DMB2 117 aa9.22□□□□□ -0.93
CTSA-210ENST00000606000 HOXA1P49639 335 aaPredicted RBP9.22□□□□□ -0.93
CTSA-210ENST00000606000 ZNF79Q15937 498 aa9.22□□□□□ -0.93
CTSA-210ENST00000606000 PYDC2Q56P42 97 aa9.22□□□□□ -0.93
CTSA-210ENST00000606000 CCDC190Q86UF4 302 aa9.22□□□□□ -0.93
CTSA-210ENST00000606000 SELENOHQ8IZQ5 122 aaKnown RBP9.22□□□□□ -0.93
CTSA-210ENST00000606000 RNASE11Q8TAA1 199 aaKnown RBP9.22□□□□□ -0.93
CTSA-210ENST00000606000 TRIM63Q969Q1 353 aa9.22□□□□□ -0.93
CTSA-210ENST00000606000 TMEM222Q9H0R3 208 aa9.22□□□□□ -0.93
CTSA-210ENST00000606000 TUBA4BQ9H853 241 aa9.22□□□□□ -0.93
CTSA-210ENST00000606000 ZMAT4Q9H898 229 aa9.22□□□□□ -0.93
CTSA-210ENST00000606000 MCUBQ9NWR8 336 aa9.22□□□□□ -0.93
CTSA-210ENST00000606000 UFC1Q9Y3C8 167 aa9.22□□□□□ -0.93
CTSA-210ENST00000606000 RBMY1BA6NDE4 496 aaKnown RBP9.21□□□□□ -0.94
CTSA-210ENST00000606000 RBMY1EA6NEQ0 496 aaKnown RBP9.21□□□□□ -0.94
CTSA-210ENST00000606000 OR11H12B2RN74 326 aa9.21□□□□□ -0.94
CTSA-210ENST00000606000 CDS2O95674 445 aa9.21□□□□□ -0.94
CTSA-210ENST00000606000 CTSGP08311 255 aa9.21□□□□□ -0.94
CTSA-210ENST00000606000 RBMY1DP0C7P1 496 aaKnown RBP9.21□□□□□ -0.94
CTSA-210ENST00000606000 ERHP84090 104 aaKnown RBP9.21□□□□□ -0.94
CTSA-210ENST00000606000 SURF2Q15527 256 aaPredicted RBP9.21□□□□□ -0.94
CTSA-210ENST00000606000 SPANXN2Q5MJ10 180 aa9.21□□□□□ -0.94
CTSA-210ENST00000606000 TMEM268Q5VZI3 342 aa9.21□□□□□ -0.94
CTSA-210ENST00000606000 LINC00322Q6ZN03 302 aaPredicted RBP9.21□□□□□ -0.94
CTSA-210ENST00000606000 OR1L6Q8NGR2 347 aa9.21□□□□□ -0.94
CTSA-210ENST00000606000 RRNAD1Q96FB5 475 aaKnown RBP9.21□□□□□ -0.94
CTSA-210ENST00000606000 PRRT1Q99946 306 aa9.21□□□□□ -0.94
CTSA-210ENST00000606000 FAM110AQ9BQ89 295 aa9.21□□□□□ -0.94
CTSA-210ENST00000606000 SRD5A3Q9H8P0 318 aa9.21□□□□□ -0.94
CTSA-210ENST00000606000 PALMDQ9NP74 551 aa9.21□□□□□ -0.94
CTSA-210ENST00000606000 BATF3Q9NR55 127 aa9.21□□□□□ -0.94
CTSA-210ENST00000606000 SLC2A8Q9NY64 477 aa9.21□□□□□ -0.94
CTSA-210ENST00000606000 MRPL36Q9P0J6 103 aaKnown RBP9.21□□□□□ -0.94
CTSA-210ENST00000606000 MRPL27Q9P0M9 148 aaKnown RBP9.21□□□□□ -0.94
CTSA-210ENST00000606000 RABL2AQ9UBK7 228 aaPredicted RBP9.21□□□□□ -0.94
CTSA-210ENST00000606000 RABL2BQ9UNT1 228 aa9.21□□□□□ -0.94
CTSA-210ENST00000606000 KMT2CQ8NEZ4 4911 aaKnown RBP9.2□□□□□ -0.94
CTSA-210ENST00000606000 IGHV3-49A0A0A0MS15 119 aa9.2□□□□□ -0.94
CTSA-210ENST00000606000 NDUFA4O00483 81 aa9.2□□□□□ -0.94
CTSA-210ENST00000606000 ATG12O94817 140 aa9.2□□□□□ -0.94
CTSA-210ENST00000606000 RNASE2P10153 161 aaKnown RBP9.2□□□□□ -0.94
CTSA-210ENST00000606000 MFAP4P55083 255 aa9.2□□□□□ -0.94
CTSA-210ENST00000606000 ELLP55199 621 aaPredicted RBP9.2□□□□□ -0.94
CTSA-210ENST00000606000 KLF9Q13886 244 aaPredicted RBP9.2□□□□□ -0.94
CTSA-210ENST00000606000 SPSB3Q6PJ21 355 aa9.2□□□□□ -0.94
CTSA-210ENST00000606000 OR52B4Q8NGK2 314 aa9.2□□□□□ -0.94
CTSA-210ENST00000606000 RBPMSQ93062 196 aaKnown RBP9.2□□□□□ -0.94
CTSA-210ENST00000606000 MARC2Q969Z3 335 aa9.2□□□□□ -0.94
CTSA-210ENST00000606000 GPR146Q96CH1 333 aa9.2□□□□□ -0.94
CTSA-210ENST00000606000 PDCD10Q9BUL8 212 aa9.2□□□□□ -0.94
CTSA-210ENST00000606000 DAZ1Q9NQZ3 744 aaKnown RBP9.2□□□□□ -0.94
CTSA-210ENST00000606000 CACNG5Q9UF02 275 aa9.2□□□□□ -0.94
CTSA-210ENST00000606000 NUPL2O15504 423 aaKnown RBP9.19□□□□□ -0.94
CTSA-210ENST00000606000 GNG7O60262 68 aa9.19□□□□□ -0.94
CTSA-210ENST00000606000 SNCAP37840 140 aa9.19□□□□□ -0.94
CTSA-210ENST00000606000 SUPT4H1P63272 117 aaKnown RBP9.19□□□□□ -0.94
CTSA-210ENST00000606000 TMEM187Q14656 261 aa9.19□□□□□ -0.94
CTSA-210ENST00000606000 MLANAQ16655 118 aa9.19□□□□□ -0.94
CTSA-210ENST00000606000 CITED4Q96RK1 184 aa9.19□□□□□ -0.94
CTSA-210ENST00000606000 ATP6V0BQ99437 205 aa9.19□□□□□ -0.94
CTSA-210ENST00000606000 SPATA25Q9BR10 227 aa9.19□□□□□ -0.94
CTSA-210ENST00000606000 FNDC4Q9H6D8 234 aaPredicted RBP9.19□□□□□ -0.94
CTSA-210ENST00000606000 UBQLN2Q9UHD9 624 aa9.19□□□□□ -0.94
CTSA-210ENST00000606000 IGHV3OR16-13A0A075B7E8 117 aa9.18□□□□□ -0.94
CTSA-210ENST00000606000 IGHV3-74A0A0B4J1X5 117 aa9.18□□□□□ -0.94
CTSA-210ENST00000606000 INS-IGF2F8WCM5 200 aa9.18□□□□□ -0.94
CTSA-210ENST00000606000 B3GALNT1O75752 331 aa9.18□□□□□ -0.94
CTSA-210ENST00000606000 YIF1AO95070 293 aa9.18□□□□□ -0.94
CTSA-210ENST00000606000 AKR1C4P17516 323 aa9.18□□□□□ -0.94
CTSA-210ENST00000606000 FCGR2BP31994 310 aaPredicted RBP9.18□□□□□ -0.94
CTSA-210ENST00000606000 DHODHQ02127 395 aa9.18□□□□□ -0.94
CTSA-210ENST00000606000 BSXQ3C1V8 233 aa9.18□□□□□ -0.94
CTSA-210ENST00000606000 PVRIGQ6DKI7 326 aa9.18□□□□□ -0.94
CTSA-210ENST00000606000 RBPMS2Q6ZRY4 209 aaKnown RBP9.18□□□□□ -0.94
CTSA-210ENST00000606000 SLC16A13Q7RTY0 426 aa9.18□□□□□ -0.94
CTSA-210ENST00000606000 SRRQ9GZT4 340 aa9.18□□□□□ -0.94
CTSA-210ENST00000606000 HIPK2Q9H2X6 1198 aa9.18□□□□□ -0.94
CTSA-210ENST00000606000 EDA2RQ9HAV5 297 aa9.18□□□□□ -0.94
CTSA-210ENST00000606000 PTTG2Q9NZH5 202 aa9.18□□□□□ -0.94
CTSA-210ENST00000606000 SCP2D1Q9UJQ7 156 aa9.18□□□□□ -0.94
CTSA-210ENST00000606000 TMEM56-RWDD3S4R434 201 aa9.18□□□□□ -0.94
CTSA-210ENST00000606000 TRAV25A0A0B4J276 109 aa9.17□□□□□ -0.94
CTSA-210ENST00000606000 C15orf62A8K5M9 175 aa9.17□□□□□ -0.94
CTSA-210ENST00000606000 OPRK1P41145 380 aa9.17□□□□□ -0.94
CTSA-210ENST00000606000 SPCS3P61009 180 aa9.17□□□□□ -0.94
CTSA-210ENST00000606000 RELQ04864 619 aaPredicted RBP9.17□□□□□ -0.94
CTSA-210ENST00000606000 AARDQ4LEZ3 155 aa9.17□□□□□ -0.94
CTSA-210ENST00000606000 TMED4Q7Z7H5 227 aa9.17□□□□□ -0.94
CTSA-210ENST00000606000 FAM219AQ8IW50 185 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms