RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 NUDCD2Q8WVJ2 157 aa10.97□□□□□ -0.65
NEDD8-MDP1-204ENST00000605847 MOB3AQ96BX8 217 aa10.97□□□□□ -0.65
NEDD8-MDP1-204ENST00000605847 ATG101Q9BSB4 218 aa10.97□□□□□ -0.65
NEDD8-MDP1-204ENST00000605847 SLC5A7Q9GZV3 580 aa10.97□□□□□ -0.65
NEDD8-MDP1-204ENST00000605847 FKBP14Q9NWM8 211 aa10.97□□□□□ -0.65
NEDD8-MDP1-204ENST00000605847 LSM2Q9Y333 95 aaKnown RBP10.97□□□□□ -0.65
NEDD8-MDP1-204ENST00000605847 TEX48A0A1B0GUV7 120 aa10.96□□□□□ -0.65
NEDD8-MDP1-204ENST00000605847 PTGES3LE9PB15 166 aa10.96□□□□□ -0.65
NEDD8-MDP1-204ENST00000605847 IGHV3-48P01763 117 aa10.96□□□□□ -0.65
NEDD8-MDP1-204ENST00000605847 NPPCP23582 126 aa10.96□□□□□ -0.65
NEDD8-MDP1-204ENST00000605847 FCGR2CP31995 323 aa10.96□□□□□ -0.65
NEDD8-MDP1-204ENST00000605847 SPATA12Q7Z6I5 190 aa10.96□□□□□ -0.65
NEDD8-MDP1-204ENST00000605847 TPRA1Q86W33 373 aa10.96□□□□□ -0.65
NEDD8-MDP1-204ENST00000605847 PINX1Q96BK5 328 aaKnown RBP10.96□□□□□ -0.65
NEDD8-MDP1-204ENST00000605847 XCL2Q9UBD3 114 aa10.96□□□□□ -0.65
NEDD8-MDP1-204ENST00000605847 NSG2Q9Y328 171 aa10.96□□□□□ -0.65
NEDD8-MDP1-204ENST00000605847 PUS1Q9Y606 427 aaKnown RBP eCLIP10.96□□□□□ -0.65
NEDD8-MDP1-204ENST00000605847 IFITM5A6NNB3 132 aa10.95□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 I3L2K1 104 aa10.95□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 MT-CO2P00403 227 aa10.95□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 GNAO1P09471 354 aa10.95□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 INAFM2P0DMQ5 153 aa10.95□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 FGF9P31371 208 aaPredicted RBP10.95□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 FXYD4P59646 89 aa10.95□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 ZNF600Q6ZNG1 722 aa10.95□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 YTHDF1Q9BYJ9 559 aaKnown RBP10.95□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 FKBP11Q9NYL4 201 aa10.95□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 LRP1BQ9NZR2 4599 aa10.95□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 TMEM235A6NFC5 223 aa10.94□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 PPYP01298 95 aa10.94□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 NPBWR1P48145 328 aa10.94□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 EIF2B2P49770 351 aaKnown RBP10.94□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 OR10A3P58181 314 aa10.94□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 TSPAN14Q8NG11 270 aa10.94□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 NARS2Q96I59 477 aaKnown RBP10.94□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 RAB40CQ96S21 281 aa10.94□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 NIPSNAP3BQ9BS92 247 aa10.94□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 PRNDQ9UKY0 176 aa10.94□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 NBDYA0A0U1RRE5 68 aa10.93□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 CASQ2O14958 399 aaPredicted RBP10.93□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 KRASP01116 189 aa10.93□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 FABP5Q01469 135 aa10.93□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 PSMG4Q5JS54 123 aa10.93□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 ZNF818PQ6ZRF7 136 aa10.93□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 DCANP1Q8TF63 244 aa10.93□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 METTL26Q96S19 204 aa10.93□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 NEU1Q99519 415 aa10.93□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 ZFAND3Q9H8U3 227 aa10.93□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 ACOT13Q9NPJ3 140 aa10.93□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 IGHV3OR16-12A0A075B7B8 117 aa10.92□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 SMIM9A6NGZ8 99 aa10.92□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 P2RY1P47900 373 aa10.92□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 DHRS2Q13268 280 aa10.92□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 KCTD21Q4G0X4 260 aa10.92□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 FAM222AQ5U5X8 452 aa10.92□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 TMEM88Q6PEY1 159 aa10.92□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 TMEM17Q86X19 198 aa10.92□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 PACRGLQ8N7B6 248 aa10.92□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 C15orf53Q8NAA6 179 aa10.92□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 BEST4Q8NFU0 473 aa10.92□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 BORCS5Q969J3 196 aa10.92□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 TSC22D3Q99576 134 aa10.92□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 C8orf4Q9NR00 106 aa10.92□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 SCN3BQ9NY72 215 aa10.92□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 DKK2Q9UBU2 259 aa10.92□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 RFNGQ9Y644 331 aa10.92□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 HELTA6NFD8 242 aa10.91□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 SCGNO76038 276 aa10.91□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 PTHLHP12272 177 aa10.91□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 RAB3BP20337 219 aa10.91□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 MYL9P24844 172 aa10.91□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 G6PCP35575 357 aa10.91□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 TRAV1-2A0A0B4J238 106 aa10.9□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 A0A1B0GU03 582 aa10.9□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 SSX5O60225 188 aa10.9□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 RLN1P04808 185 aa10.9□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 F2RP25116 425 aa10.9□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 LPAR6P43657 344 aa10.9□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 SNRPD3P62318 126 aaKnown RBP10.9□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 MLLT11Q13015 90 aaPredicted RBP10.9□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 ZNF705AQ6ZN79 300 aaPredicted RBP10.9□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 APOBP04114 4563 aaKnown RBP10.9□□□□□ -0.66
NEDD8-MDP1-204ENST00000605847 ZNF705FA8MVS1 300 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-MDP1-204ENST00000605847 ZNF705DP0CH99 300 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-MDP1-204ENST00000605847 ZNF705BP0CI00 300 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-MDP1-204ENST00000605847 ERHP84090 104 aaKnown RBP10.89□□□□□ -0.67
NEDD8-MDP1-204ENST00000605847 OXA1LQ15070 435 aa10.89□□□□□ -0.67
NEDD8-MDP1-204ENST00000605847 GSG1LQ6UXU4 331 aa10.89□□□□□ -0.67
NEDD8-MDP1-204ENST00000605847 ZNF114Q8NC26 417 aa10.89□□□□□ -0.67
NEDD8-MDP1-204ENST00000605847 AGRNO00468 2067 aa10.88□□□□□ -0.67
NEDD8-MDP1-204ENST00000605847 SCGB2A1O75556 95 aa10.88□□□□□ -0.67
NEDD8-MDP1-204ENST00000605847 CRYBB3P26998 211 aa10.88□□□□□ -0.67
NEDD8-MDP1-204ENST00000605847 AP2S1P53680 142 aaPredicted RBP10.88□□□□□ -0.67
NEDD8-MDP1-204ENST00000605847 HERV-K104P61576 105 aa10.88□□□□□ -0.67
NEDD8-MDP1-204ENST00000605847 DAD1P61803 113 aa10.88□□□□□ -0.67
NEDD8-MDP1-204ENST00000605847 OGFRL1Q5TC84 451 aaPredicted RBP10.88□□□□□ -0.67
NEDD8-MDP1-204ENST00000605847 CADM3Q8N126 398 aa10.88□□□□□ -0.67
NEDD8-MDP1-204ENST00000605847 FCAMRQ8WWV6 532 aa10.88□□□□□ -0.67
NEDD8-MDP1-204ENST00000605847 TMEM230Q96A57 120 aa10.88□□□□□ -0.67
NEDD8-MDP1-204ENST00000605847 NACAE9PAV3 2078 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms