RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 FAM216BQ8N7L0 139 aa17.64■□□□□ 0.41
SH3D19-211ENST00000604030 HIST1H2BLQ99880 126 aa17.64■□□□□ 0.41
SH3D19-211ENST00000604030 CYTL1Q9NRR1 136 aa17.64■□□□□ 0.41
SH3D19-211ENST00000604030 C1QTNF9P0C862 333 aa17.63■□□□□ 0.41
SH3D19-211ENST00000604030 SUMO2P61956 95 aaKnown RBP17.63■□□□□ 0.41
SH3D19-211ENST00000604030 NUTF2P61970 127 aaKnown RBP17.63■□□□□ 0.41
SH3D19-211ENST00000604030 PPP1R27Q86WC6 154 aa17.63■□□□□ 0.41
SH3D19-211ENST00000604030 TNFRSF14Q92956 283 aa17.63■□□□□ 0.41
SH3D19-211ENST00000604030 CACNG7P62955 275 aa17.63■□□□□ 0.41
SH3D19-211ENST00000604030 SEC11AP67812 179 aa17.63■□□□□ 0.41
SH3D19-211ENST00000604030 WFDC1Q9HC57 220 aa17.63■□□□□ 0.41
SH3D19-211ENST00000604030 RP1P56715 2156 aa17.63■□□□□ 0.41
SH3D19-211ENST00000604030 LHX2P50458 406 aa17.63■□□□□ 0.41
SH3D19-211ENST00000604030 MRAP2Q96G30 205 aa17.63■□□□□ 0.41
SH3D19-211ENST00000604030 LY96Q9Y6Y9 160 aa17.63■□□□□ 0.41
SH3D19-211ENST00000604030 CABIN1Q9Y6J0 2220 aa17.62■□□□□ 0.41
SH3D19-211ENST00000604030 C10orf126Q8N4M7 172 aa17.62■□□□□ 0.41
SH3D19-211ENST00000604030 TSKUQ8WUA8 353 aa17.62■□□□□ 0.41
SH3D19-211ENST00000604030 SAA2-SAA4A0A096LPE2 208 aa17.62■□□□□ 0.41
SH3D19-211ENST00000604030 A0A0A6YYD4 124 aa17.62■□□□□ 0.41
SH3D19-211ENST00000604030 C9JCJ5 164 aa17.62■□□□□ 0.41
SH3D19-211ENST00000604030 SAA2P0DJI9 122 aaPredicted RBP17.62■□□□□ 0.41
SH3D19-211ENST00000604030 FAM19A2Q8N3H0 131 aa17.62■□□□□ 0.41
SH3D19-211ENST00000604030 SEMA5BQ9P283 1151 aa17.62■□□□□ 0.41
SH3D19-211ENST00000604030 ZNF257Q9Y2Q1 563 aa17.62■□□□□ 0.41
SH3D19-211ENST00000604030 PGPEP1LA6NFU8 196 aa17.62■□□□□ 0.41
SH3D19-211ENST00000604030 EPOPA6NHQ4 379 aa17.62■□□□□ 0.41
SH3D19-211ENST00000604030 C17orf100A8MU93 164 aa17.62■□□□□ 0.41
SH3D19-211ENST00000604030 IGKV3D-15A0A087WSY6 115 aa17.62■□□□□ 0.41
SH3D19-211ENST00000604030 IGKV3-15P01624 115 aa17.62■□□□□ 0.41
SH3D19-211ENST00000604030 CELA3AP09093 270 aa17.62■□□□□ 0.41
SH3D19-211ENST00000604030 LINC00614P0C842 121 aa17.62■□□□□ 0.41
SH3D19-211ENST00000604030 FDCSPQ8NFU4 85 aa17.62■□□□□ 0.41
SH3D19-211ENST00000604030 FAM169BQ8N8A8 192 aa17.61■□□□□ 0.41
SH3D19-211ENST00000604030 SMPXQ9UHP9 88 aa17.61■□□□□ 0.41
SH3D19-211ENST00000604030 M0R381 172 aa17.61■□□□□ 0.41
SH3D19-211ENST00000604030 TNFSF13O75888 250 aa17.61■□□□□ 0.41
SH3D19-211ENST00000604030 GCSAMLQ5JQS6 135 aa17.61■□□□□ 0.41
SH3D19-211ENST00000604030 FAM57AQ8TBR7 257 aa17.61■□□□□ 0.41
SH3D19-211ENST00000604030 TSPAN13O95857 204 aa17.61■□□□□ 0.41
SH3D19-211ENST00000604030 DUTP33316 252 aaKnown RBP17.61■□□□□ 0.41
SH3D19-211ENST00000604030 ZNF837Q96EG3 531 aaPredicted RBP17.61■□□□□ 0.41
SH3D19-211ENST00000604030 EFNB3Q15768 340 aa17.6■□□□□ 0.41
SH3D19-211ENST00000604030 ARL6IP6Q8N6S5 226 aa17.6■□□□□ 0.41
SH3D19-211ENST00000604030 AGMATQ9BSE5 352 aa17.6■□□□□ 0.41
SH3D19-211ENST00000604030 NAPSAO96009 420 aa17.6■□□□□ 0.41
SH3D19-211ENST00000604030 GHRHP01286 108 aa17.6■□□□□ 0.41
SH3D19-211ENST00000604030 IGKV1D-33P01593 117 aa17.6■□□□□ 0.41
SH3D19-211ENST00000604030 IGKV1-33P01594 117 aa17.6■□□□□ 0.41
SH3D19-211ENST00000604030 OCC1Q8TAD7 63 aa17.6■□□□□ 0.41
SH3D19-211ENST00000604030 VWCEQ96DN2 955 aa17.6■□□□□ 0.41
SH3D19-211ENST00000604030 C9orf172C9J069 976 aa17.6■□□□□ 0.41
SH3D19-211ENST00000604030 ZIC4Q8N9L1 334 aa17.6■□□□□ 0.41
SH3D19-211ENST00000604030 REG4Q9BYZ8 158 aa17.6■□□□□ 0.41
SH3D19-211ENST00000604030 RNASE7Q9H1E1 156 aaKnown RBP17.6■□□□□ 0.41
SH3D19-211ENST00000604030 NBR2O15453 112 aa17.59■□□□□ 0.41
SH3D19-211ENST00000604030 TMEM50AO95807 157 aa17.59■□□□□ 0.41
SH3D19-211ENST00000604030 TYMSP04818 313 aa17.59■□□□□ 0.41
SH3D19-211ENST00000604030 ORMDL2Q53FV1 153 aa17.59■□□□□ 0.41
SH3D19-211ENST00000604030 DPM2O94777 84 aa17.59■□□□□ 0.41
SH3D19-211ENST00000604030 UMODP07911 640 aa17.59■□□□□ 0.41
SH3D19-211ENST00000604030 KLRB1Q12918 225 aa17.59■□□□□ 0.41
SH3D19-211ENST00000604030 BEND2Q8NDZ0 799 aa17.58■□□□□ 0.41
SH3D19-211ENST00000604030 OR5AN1Q8NGI8 311 aa17.58■□□□□ 0.41
SH3D19-211ENST00000604030 F2Z2F3 143 aa17.58■□□□□ 0.4
SH3D19-211ENST00000604030 SRSF1Q07955 248 aaKnown RBP eCLIP17.58■□□□□ 0.49e-19■■■□□ 15.9
SH3D19-211ENST00000604030 TIMP3P35625 211 aa17.58■□□□□ 0.4
SH3D19-211ENST00000604030 BEX4Q9NWD9 120 aaPredicted RBP17.58■□□□□ 0.4
SH3D19-211ENST00000604030 LEPP41159 167 aa17.57■□□□□ 0.4
SH3D19-211ENST00000604030 FBLN7Q53RD9 439 aa17.57■□□□□ 0.4
SH3D19-211ENST00000604030 RNF125Q96EQ8 232 aa17.57■□□□□ 0.4
SH3D19-211ENST00000604030 FAM181BA6NEQ2 426 aa17.57■□□□□ 0.4
SH3D19-211ENST00000604030 OR9G4Q8NGQ1 327 aa17.57■□□□□ 0.4
SH3D19-211ENST00000604030 ORAOV1Q8WV07 137 aa17.57■□□□□ 0.4
SH3D19-211ENST00000604030 DICER1Q9UPY3 1922 aaKnown RBP17.57■□□□□ 0.4
SH3D19-211ENST00000604030 TRBV6-6A0A0A6YYG2 114 aa17.57■□□□□ 0.4
SH3D19-211ENST00000604030 ATP5J2P56134 94 aa17.57■□□□□ 0.4
SH3D19-211ENST00000604030 LYL1P12980 280 aa17.57■□□□□ 0.4
SH3D19-211ENST00000604030 SUPT4H1P63272 117 aaKnown RBP17.57■□□□□ 0.4
SH3D19-211ENST00000604030 HSD52Q0P140 79 aa17.57■□□□□ 0.4
SH3D19-211ENST00000604030 DCTN5Q9BTE1 182 aa17.57■□□□□ 0.4
SH3D19-211ENST00000604030 TMEM262E9PQX1 116 aa17.56■□□□□ 0.4
SH3D19-211ENST00000604030 ZNF319Q9P2F9 582 aa17.56■□□□□ 0.4
SH3D19-211ENST00000604030 PSG8Q9UQ74 426 aa17.56■□□□□ 0.4
SH3D19-211ENST00000604030 ST6GALNAC6Q969X2 333 aa17.56■□□□□ 0.4
SH3D19-211ENST00000604030 TMEM133Q9H2Q1 129 aa17.56■□□□□ 0.4
SH3D19-211ENST00000604030 PSME4Q14997 1843 aa17.56■□□□□ 0.4
SH3D19-211ENST00000604030 BRCA1P38398 1863 aaKnown RBP17.56■□□□□ 0.4
SH3D19-211ENST00000604030 IGHV3OR16-12A0A075B7B8 117 aa17.56■□□□□ 0.4
SH3D19-211ENST00000604030 A0A0G2JMM0 328 aa17.56■□□□□ 0.4
SH3D19-211ENST00000604030 A0A1W2PPB8 328 aa17.56■□□□□ 0.4
SH3D19-211ENST00000604030 A0A1W2PRS3 328 aa17.56■□□□□ 0.4
SH3D19-211ENST00000604030 PRR19A6NJB7 356 aa17.56■□□□□ 0.4
SH3D19-211ENST00000604030 KIR3DP1A8MWS1 328 aa17.56■□□□□ 0.4
SH3D19-211ENST00000604030 ATP1A1-AS1Q5TC04 95 aa17.56■□□□□ 0.4
SH3D19-211ENST00000604030 H3BUT2 72 aa17.55■□□□□ 0.4
SH3D19-211ENST00000604030 RSPO4Q2I0M5 234 aaPredicted RBP17.55■□□□□ 0.4
SH3D19-211ENST00000604030 SLC25A48Q6ZT89 311 aaKnown RBP17.55■□□□□ 0.4
SH3D19-211ENST00000604030 YAE1D1Q9NRH1 226 aa17.55■□□□□ 0.4
SH3D19-211ENST00000604030 SPTBP11277 2137 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms