RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 TECRQ9NZ01 308 aaKnown RBP15.04■□□□□ -0
UPF1-210ENST00000600689 MGAQ8IWI9 3026 aa15.04■□□□□ -0
UPF1-210ENST00000600689 C9JCJ5 164 aa15.04■□□□□ -0
UPF1-210ENST00000600689 C15orf65H3BRN8 121 aa15.04■□□□□ -0
UPF1-210ENST00000600689 SMIM21Q3B7S5 101 aa15.04■□□□□ -0
UPF1-210ENST00000600689 C18orf32Q8TCD1 76 aa15.04■□□□□ -0
UPF1-210ENST00000600689 ZNF503Q96F45 646 aa15.04■□□□□ -0
UPF1-210ENST00000600689 IGKV1OR2-108A0A075B7D4 117 aa15.03■□□□□ -0
UPF1-210ENST00000600689 PYYP10082 97 aa15.03■□□□□ -0
UPF1-210ENST00000600689 RPL19P84098 196 aaKnown RBP15.03■□□□□ -0
UPF1-210ENST00000600689 EBLN2Q6P2I7 272 aa15.03■□□□□ -0
UPF1-210ENST00000600689 FAM214BQ7L5A3 538 aa15.03■□□□□ -0
UPF1-210ENST00000600689 OR52E5Q8NH55 327 aa15.03■□□□□ -0
UPF1-210ENST00000600689 BET1LQ9NYM9 111 aa15.03■□□□□ -0
UPF1-210ENST00000600689 NKX2-8O15522 239 aa15.03■□□□□ -0
UPF1-210ENST00000600689 CRYABP02511 175 aaKnown RBP15.03■□□□□ -0
UPF1-210ENST00000600689 KLHDC1Q8N7A1 406 aa15.03■□□□□ -0
UPF1-210ENST00000600689 RND1Q92730 232 aa15.03■□□□□ -0
UPF1-210ENST00000600689 ZC2HC1AQ96GY0 325 aa15.03■□□□□ -0
UPF1-210ENST00000600689 ARL2-SNX15V9GYD0 113 aa15.03■□□□□ -0
UPF1-210ENST00000600689 YLPM1P49750 1951 aaKnown RBP15.03■□□□□ -0
UPF1-210ENST00000600689 IQCF6A8MYZ5 107 aa15.03■□□□□ -0
UPF1-210ENST00000600689 CORTO00230 105 aa15.03■□□□□ -0
UPF1-210ENST00000600689 LINC00869P0C866 280 aa15.03■□□□□ -0
UPF1-210ENST00000600689 IGLL1P15814 213 aa15.03■□□□□ -0
UPF1-210ENST00000600689 SPRNQ5BIV9 151 aa15.03■□□□□ -0
UPF1-210ENST00000600689 OR2D3Q8NGH3 330 aa15.03■□□□□ -0
UPF1-210ENST00000600689 SPAARA0A1B0GVQ0 90 aa15.02■□□□□ -0
UPF1-210ENST00000600689 TMEM249Q2WGJ8 235 aa15.02■□□□□ -0
UPF1-210ENST00000600689 DUX4L9Q6RFH8 374 aaPredicted RBP15.02■□□□□ -0
UPF1-210ENST00000600689 OR10W1Q8NGF6 305 aa15.02■□□□□ -0
UPF1-210ENST00000600689 C22orf15Q8WYQ4 148 aa15.02■□□□□ -0
UPF1-210ENST00000600689 OR8B2Q96RD0 313 aa15.02■□□□□ -0
UPF1-210ENST00000600689 ALKBH7Q9BT30 221 aaPredicted RBP15.02■□□□□ -0
UPF1-210ENST00000600689 CXXC4Q9H2H0 198 aa15.02■□□□□ -0
UPF1-210ENST00000600689 CBY3A6NI87 242 aa15.02□□□□□ -0.01
UPF1-210ENST00000600689 H3BTX0 84 aa15.02□□□□□ -0.01
UPF1-210ENST00000600689 UBE2L3P68036 154 aaKnown RBP15.02□□□□□ -0.01
UPF1-210ENST00000600689 OR10J3Q5JRS4 329 aa15.02□□□□□ -0.01
UPF1-210ENST00000600689 ZNF738Q8NE65 137 aa15.02□□□□□ -0.01
UPF1-210ENST00000600689 C11orf52Q96A22 123 aa15.02□□□□□ -0.01
UPF1-210ENST00000600689 HES4Q9HCC6 221 aa15.02□□□□□ -0.01
UPF1-210ENST00000600689 MT-ND6P03923 174 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 RBX1P62877 108 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 GNG5P63218 68 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 GDF5OSQ5U4N7 250 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 SPATA12Q7Z6I5 190 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 MRPL52Q86TS9 123 aaKnown RBP15.01□□□□□ -0.01
UPF1-210ENST00000600689 DEFB124Q8NES8 71 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 PMCHL2Q9BQD1 86 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 OR51B2Q9Y5P1 312 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 TPRP12270 2363 aaKnown RBP15.01□□□□□ -0.01
UPF1-210ENST00000600689 HLA-DQA1P01909 254 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 AREGP15514 252 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 HOXC12P31275 282 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 TRIB1Q96RU8 372 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 IFI27L2Q9H2X8 130 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 CACNA1GO43497 2377 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 PLXNB1O43157 2135 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 TRAV9-1A0A075B6T8 112 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 TRGV5A0A0B4J1U4 118 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 TRBV9A0A0B4J1U6 114 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 J3QR06 171 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 ADH4P08319 380 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 SPACA3Q8IXA5 215 aa15.01□□□□□ -0.01
UPF1-210ENST00000600689 IGLV2-8P01709 118 aa15□□□□□ -0.01
UPF1-210ENST00000600689 CCL11P51671 97 aa15□□□□□ -0.01
UPF1-210ENST00000600689 ZNF137PP52743 207 aa15□□□□□ -0.01
UPF1-210ENST00000600689 HSPE1P61604 102 aaKnown RBP15□□□□□ -0.01
UPF1-210ENST00000600689 LINC00173Q6ZV60 143 aa15□□□□□ -0.01
UPF1-210ENST00000600689 OR2T6Q8NHC8 308 aa15□□□□□ -0.01
UPF1-210ENST00000600689 COX11Q9Y6N1 276 aa15□□□□□ -0.01
UPF1-210ENST00000600689 hDV102S1A0JD36 115 aa15□□□□□ -0.01
UPF1-210ENST00000600689 C15orf61A6NNL5 157 aa15□□□□□ -0.01
UPF1-210ENST00000600689 TCTAP57738 103 aa15□□□□□ -0.01
UPF1-210ENST00000600689 IGKV1D-17A0A075B6S4 117 aa14.99□□□□□ -0.01
UPF1-210ENST00000600689 SAA2-SAA4A0A096LPE2 208 aa14.99□□□□□ -0.01
UPF1-210ENST00000600689 NKX6-3A6NJ46 265 aa14.99□□□□□ -0.01
UPF1-210ENST00000600689 SAA2P0DJI9 122 aaPredicted RBP14.99□□□□□ -0.01
UPF1-210ENST00000600689 PRR20EP86478 221 aa14.99□□□□□ -0.01
UPF1-210ENST00000600689 PRR20CP86479 221 aa14.99□□□□□ -0.01
UPF1-210ENST00000600689 PRR20DP86480 221 aa14.99□□□□□ -0.01
UPF1-210ENST00000600689 PRR20BP86481 221 aa14.99□□□□□ -0.01
UPF1-210ENST00000600689 PRR20AP86496 221 aa14.99□□□□□ -0.01
UPF1-210ENST00000600689 UBE2V1Q13404 147 aa14.99□□□□□ -0.01
UPF1-210ENST00000600689 GABRA6Q16445 453 aa14.99□□□□□ -0.01
UPF1-210ENST00000600689 OSTCQ9NRP0 149 aa14.99□□□□□ -0.01
UPF1-210ENST00000600689 TMEM167BQ9NRX6 74 aa14.99□□□□□ -0.01
UPF1-210ENST00000600689 WASHC3Q9Y3C0 194 aa14.99□□□□□ -0.01
UPF1-210ENST00000600689 FAM181BA6NEQ2 426 aa14.99□□□□□ -0.01
UPF1-210ENST00000600689 TOX4O94842 621 aa14.99□□□□□ -0.01
UPF1-210ENST00000600689 SSBP2P81877 361 aaPredicted RBP14.99□□□□□ -0.01
UPF1-210ENST00000600689 MPV17L2Q567V2 206 aa14.99□□□□□ -0.01
UPF1-210ENST00000600689 OR4S2Q8NH73 311 aa14.99□□□□□ -0.01
UPF1-210ENST00000600689 BLNKQ8WV28 456 aa14.99□□□□□ -0.01
UPF1-210ENST00000600689 SNAI2O43623 268 aa14.98□□□□□ -0.01
UPF1-210ENST00000600689 WT1P19544 449 aaPredicted RBP14.98□□□□□ -0.01
UPF1-210ENST00000600689 CA7P43166 264 aa14.98□□□□□ -0.01
UPF1-210ENST00000600689 FBLN7Q53RD9 439 aa14.98□□□□□ -0.01
UPF1-210ENST00000600689 TCF24Q7RTU0 167 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms