RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 ATP6V0BQ99437 205 aa11.92□□□□□ -0.5
RPS28-203ENST00000600659 SHPKQ9UHJ6 478 aa11.92□□□□□ -0.5
RPS28-203ENST00000600659 IGHV3-35A0A0C4DH35 117 aa11.91□□□□□ -0.5
RPS28-203ENST00000600659 PLA2G10O15496 165 aa11.91□□□□□ -0.5
RPS28-203ENST00000600659 CYB5BO43169 146 aa11.91□□□□□ -0.5
RPS28-203ENST00000600659 NDUFB6O95139 128 aa11.91□□□□□ -0.5
RPS28-203ENST00000600659 LY86O95711 162 aa11.91□□□□□ -0.5
RPS28-203ENST00000600659 IFNA17P01571 189 aa11.91□□□□□ -0.5
RPS28-203ENST00000600659 SPCS3P61009 180 aa11.91□□□□□ -0.5
RPS28-203ENST00000600659 ERHP84090 104 aaKnown RBP11.91□□□□□ -0.5
RPS28-203ENST00000600659 PPP1R1AQ13522 171 aa11.91□□□□□ -0.5
RPS28-203ENST00000600659 CNPY1Q3B7I2 92 aa11.91□□□□□ -0.5
RPS28-203ENST00000600659 DEFB121Q5J5C9 76 aa11.91□□□□□ -0.5
RPS28-203ENST00000600659 Q8N1Y9 231 aa11.91□□□□□ -0.5
RPS28-203ENST00000600659 LRTM2Q8N967 370 aa11.91□□□□□ -0.5
RPS28-203ENST00000600659 RNASE11Q8TAA1 199 aaKnown RBP11.91□□□□□ -0.5
RPS28-203ENST00000600659 TMEM170AQ8WVE7 144 aa11.91□□□□□ -0.5
RPS28-203ENST00000600659 MISP3Q96FF7 219 aa11.91□□□□□ -0.5
RPS28-203ENST00000600659 BSCL2Q96G97 398 aaPredicted RBP11.91□□□□□ -0.5
RPS28-203ENST00000600659 B9D2Q9BPU9 175 aa11.91□□□□□ -0.5
RPS28-203ENST00000600659 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.91□□□□□ -0.5
RPS28-203ENST00000600659 KCNIP3Q9Y2W7 256 aa11.91□□□□□ -0.5
RPS28-203ENST00000600659 NAP1L6A6NFF2 107 aa11.9□□□□□ -0.5
RPS28-203ENST00000600659 MT-CO2P00403 227 aa11.9□□□□□ -0.5
RPS28-203ENST00000600659 CTSGP08311 255 aa11.9□□□□□ -0.5
RPS28-203ENST00000600659 FOLR2P14207 255 aa11.9□□□□□ -0.5
RPS28-203ENST00000600659 PLET1Q6UQ28 207 aa11.9□□□□□ -0.5
RPS28-203ENST00000600659 LGI3Q8N145 548 aa11.9□□□□□ -0.5
RPS28-203ENST00000600659 TMEM190Q8WZ59 177 aa11.9□□□□□ -0.5
RPS28-203ENST00000600659 FNDC4Q9H6D8 234 aaPredicted RBP11.9□□□□□ -0.5
RPS28-203ENST00000600659 MRPL36Q9P0J6 103 aaKnown RBP11.9□□□□□ -0.5
RPS28-203ENST00000600659 FLVCR2Q9UPI3 526 aa11.9□□□□□ -0.5
RPS28-203ENST00000600659 SFT2D2O95562 160 aa11.89□□□□□ -0.51
RPS28-203ENST00000600659 IGHV3-48P01763 117 aa11.89□□□□□ -0.51
RPS28-203ENST00000600659 C8orf88P0DMB2 117 aa11.89□□□□□ -0.51
RPS28-203ENST00000600659 SULT1A3P0DMM9 295 aa11.89□□□□□ -0.51
RPS28-203ENST00000600659 SULT1A4P0DMN0 295 aa11.89□□□□□ -0.51
RPS28-203ENST00000600659 HOXA1P49639 335 aaPredicted RBP11.89□□□□□ -0.51
RPS28-203ENST00000600659 DEFB114Q30KQ6 69 aa11.89□□□□□ -0.51
RPS28-203ENST00000600659 CD300EQ496F6 205 aaPredicted RBP11.89□□□□□ -0.51
RPS28-203ENST00000600659 TM4SF20Q53R12 229 aa11.89□□□□□ -0.51
RPS28-203ENST00000600659 SPSB3Q6PJ21 355 aa11.89□□□□□ -0.51
RPS28-203ENST00000600659 LINC00299Q6ZSB3 139 aa11.89□□□□□ -0.51
RPS28-203ENST00000600659 CENPSQ8N2Z9 138 aa11.89□□□□□ -0.51
RPS28-203ENST00000600659 C7orf50Q9BRJ6 194 aaKnown RBP11.89□□□□□ -0.51
RPS28-203ENST00000600659 PDCD10Q9BUL8 212 aa11.89□□□□□ -0.51
RPS28-203ENST00000600659 LINC00854A0A1B0GVQ3 168 aa11.88□□□□□ -0.51
RPS28-203ENST00000600659 PITX3O75364 302 aa11.88□□□□□ -0.51
RPS28-203ENST00000600659 NXPH3O95157 252 aa11.88□□□□□ -0.51
RPS28-203ENST00000600659 ANXA3P12429 323 aa11.88□□□□□ -0.51
RPS28-203ENST00000600659 CBLN1P23435 193 aa11.88□□□□□ -0.51
RPS28-203ENST00000600659 SRPXP78539 464 aa11.88□□□□□ -0.51
RPS28-203ENST00000600659 FAM106AQ4KMX7 169 aa11.88□□□□□ -0.51
RPS28-203ENST00000600659 UBAC2Q8NBM4 344 aa11.88□□□□□ -0.51
RPS28-203ENST00000600659 OR2K2Q8NGT1 345 aa11.88□□□□□ -0.51
RPS28-203ENST00000600659 PINX1Q96BK5 328 aaKnown RBP11.88□□□□□ -0.51
RPS28-203ENST00000600659 HSPB7Q9UBY9 170 aa11.88□□□□□ -0.51
RPS28-203ENST00000600659 MLXQ9UH92 298 aa11.88□□□□□ -0.51
RPS28-203ENST00000600659 DUXBA0A1W2PPF3 345 aa11.87□□□□□ -0.51
RPS28-203ENST00000600659 ZNF320A2RRD8 509 aa11.87□□□□□ -0.51
RPS28-203ENST00000600659 ZNF785A8K8V0 405 aa11.87□□□□□ -0.51
RPS28-203ENST00000600659 NDUFA4O00483 81 aa11.87□□□□□ -0.51
RPS28-203ENST00000600659 VAMP1P23763 118 aa11.87□□□□□ -0.51
RPS28-203ENST00000600659 UBE2MP61081 183 aaKnown RBP11.87□□□□□ -0.51
RPS28-203ENST00000600659 DCTN2Q13561 401 aaKnown RBP11.87□□□□□ -0.51
RPS28-203ENST00000600659 SMCO1Q147U7 214 aa11.87□□□□□ -0.51
RPS28-203ENST00000600659 Q56UQ5 140 aa11.87□□□□□ -0.51
RPS28-203ENST00000600659 TXN2Q99757 166 aa11.87□□□□□ -0.51
RPS28-203ENST00000600659 SELENOKQ9Y6D0 94 aa11.87□□□□□ -0.51
RPS28-203ENST00000600659 SMAD5-AS1Q9Y6J3 95 aa11.87□□□□□ -0.51
RPS28-203ENST00000600659 SNCAP37840 140 aa11.86□□□□□ -0.51
RPS28-203ENST00000600659 INPP1P49441 399 aa11.86□□□□□ -0.51
RPS28-203ENST00000600659 MFAP4P55083 255 aa11.86□□□□□ -0.51
RPS28-203ENST00000600659 ELLP55199 621 aaPredicted RBP11.86□□□□□ -0.51
RPS28-203ENST00000600659 TNFRSF9Q07011 255 aa11.86□□□□□ -0.51
RPS28-203ENST00000600659 MLANAQ16655 118 aa11.86□□□□□ -0.51
RPS28-203ENST00000600659 C2orf83Q53S99 150 aa11.86□□□□□ -0.51
RPS28-203ENST00000600659 UXS1Q8NBZ7 420 aa11.86□□□□□ -0.51
RPS28-203ENST00000600659 CCDC32Q9BV29 185 aa11.86□□□□□ -0.51
RPS28-203ENST00000600659 BATF3Q9NR55 127 aa11.86□□□□□ -0.51
RPS28-203ENST00000600659 IGHV3OR16-8A0A075B7F1 116 aa11.86□□□□□ -0.51
RPS28-203ENST00000600659 A0A1B0GU03 582 aa11.86□□□□□ -0.51
RPS28-203ENST00000600659 C9orf170A2RU37 121 aa11.86□□□□□ -0.51
RPS28-203ENST00000600659 DHRS2Q13268 280 aa11.86□□□□□ -0.51
RPS28-203ENST00000600659 LCN12Q6JVE5 192 aa11.86□□□□□ -0.51
RPS28-203ENST00000600659 TMEM61Q8N0U2 210 aa11.86□□□□□ -0.51
RPS28-203ENST00000600659 WDR89Q96FK6 387 aaPredicted RBP11.86□□□□□ -0.51
RPS28-203ENST00000600659 PTTG2Q9NZH5 202 aa11.86□□□□□ -0.51
RPS28-203ENST00000600659 CORTO00230 105 aa11.85□□□□□ -0.51
RPS28-203ENST00000600659 LYRM1O43325 122 aa11.85□□□□□ -0.51
RPS28-203ENST00000600659 OR4E1P0C645 316 aa11.85□□□□□ -0.51
RPS28-203ENST00000600659 SLC25A6P12236 298 aa11.85□□□□□ -0.51
RPS28-203ENST00000600659 ANXA7P20073 488 aaKnown RBP11.85□□□□□ -0.51
RPS28-203ENST00000600659 HTR2BP41595 481 aa11.85□□□□□ -0.51
RPS28-203ENST00000600659 CD69Q07108 199 aa11.85□□□□□ -0.51
RPS28-203ENST00000600659 BTNL8Q6UX41 500 aa11.85□□□□□ -0.51
RPS28-203ENST00000600659 SLC24A4Q8NFF2 622 aa11.85□□□□□ -0.51
RPS28-203ENST00000600659 DYNLRB2Q8TF09 96 aa11.85□□□□□ -0.51
RPS28-203ENST00000600659 OR10C1Q96KK4 312 aa11.85□□□□□ -0.51
RPS28-203ENST00000600659 ENY2Q9NPA8 101 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms