RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 TMEM183BQ1AE95 376 aa3.82□□□□□ -1.8
PAF1-208ENST00000598594 FAM182AQ5T1J6 154 aa3.82□□□□□ -1.8
PAF1-208ENST00000598594 SSX8Q7RTT4 187 aa3.82□□□□□ -1.8
PAF1-208ENST00000598594 SCXQ7RTU7 201 aa3.82□□□□□ -1.8
PAF1-208ENST00000598594 TRAPPC6BQ86SZ2 158 aa3.82□□□□□ -1.8
PAF1-208ENST00000598594 NR2C2APQ86WQ0 139 aa3.82□□□□□ -1.8
PAF1-208ENST00000598594 TMEM183AQ8IXX5 376 aa3.82□□□□□ -1.8
PAF1-208ENST00000598594 OR4A5Q8NH83 315 aa3.82□□□□□ -1.8
PAF1-208ENST00000598594 SDF2Q99470 211 aa3.82□□□□□ -1.8
PAF1-208ENST00000598594 HDHD3Q9BSH5 251 aaPredicted RBP3.82□□□□□ -1.8
PAF1-208ENST00000598594 RERGLQ9H628 205 aa3.82□□□□□ -1.8
PAF1-208ENST00000598594 TUBA4BQ9H853 241 aa3.82□□□□□ -1.8
PAF1-208ENST00000598594 ZNF556Q9HAH1 456 aa3.82□□□□□ -1.8
PAF1-208ENST00000598594 PIKFYVEQ9Y2I7 2098 aa3.82□□□□□ -1.8
PAF1-208ENST00000598594 DSCAMO60469 2012 aa3.82□□□□□ -1.8
PAF1-208ENST00000598594 ADGRL2O95490 1459 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 TROQ12816 1431 aaPredicted RBP3.81□□□□□ -1.8
PAF1-208ENST00000598594 IGHV1-58A0A0C4DH39 117 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 IGKV1-12A0A0C4DH73 117 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 C9JCJ5 164 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 FNDC10F2Z333 226 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 IGKV1D-12P01611 117 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 CD7P09564 240 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 HIST1H1DP16402 221 aaKnown RBP3.81□□□□□ -1.8
PAF1-208ENST00000598594 DIO3P55073 304 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 FOXA3P55318 350 aaPredicted RBP3.81□□□□□ -1.8
PAF1-208ENST00000598594 GNB1P62873 340 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 MYL5Q02045 173 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 TWIST1Q15672 202 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 SPANXN3Q5MJ09 141 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 RPL22L1Q6P5R6 122 aaKnown RBP3.81□□□□□ -1.8
PAF1-208ENST00000598594 PACRGLQ8N7B6 248 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 OR4K13Q8NH42 304 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 MAL2Q969L2 176 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 TBL1YQ9BQ87 522 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 DERL1Q9BUN8 251 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 TSSK6Q9BXA6 273 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 HEXA-AS1Q9H8Q6 139 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 CSAG2Q9Y5P2 127 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 HSPE1-MOB4S4R3N1 261 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 QRICH2Q9H0J4 1663 aa3.81□□□□□ -1.8
PAF1-208ENST00000598594 NRKQ7Z2Y5 1582 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 SIPA1L1O43166 1804 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 TMEM256-PLSCR3K7ERE1 68 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 SERF1AO75920 110 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 ZNF20P17024 532 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 CRYGSP22914 178 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 PSMB8P28062 276 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 RPL22P35268 128 aaKnown RBP3.8□□□□□ -1.8
PAF1-208ENST00000598594 ZNF93P35789 620 aaPredicted RBP3.8□□□□□ -1.8
PAF1-208ENST00000598594 FGF12P61328 243 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 PLGLB1Q02325 96 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 KLF9Q13886 244 aaPredicted RBP3.8□□□□□ -1.8
PAF1-208ENST00000598594 FHL2Q14192 279 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 DIAPH2-AS1Q14236 149 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 TIFABQ6ZNK6 161 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 ZNF329Q86UD4 541 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 ORMDL3Q8N138 153 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 FER1L6-AS1Q8NA97 138 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 C5orf17Q8NAS9 161 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 STAG3L4Q8TBR4 150 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 RNASE6Q93091 150 aaKnown RBP3.8□□□□□ -1.8
PAF1-208ENST00000598594 CAMK2N2Q96S95 79 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 ADAT1Q9BUB4 502 aaKnown RBP3.8□□□□□ -1.8
PAF1-208ENST00000598594 ZNF286AQ9HBT8 521 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 CCDC167Q9P0B6 97 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 FUT9Q9Y231 359 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 HCFC1P51610 2035 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 ALPK3Q96L96 1907 aa3.8□□□□□ -1.8
PAF1-208ENST00000598594 A2ML1A8K2U0 1454 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 ANKRD36BQ8N2N9 1353 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 TDRD6O60522 2096 aaKnown RBP3.79□□□□□ -1.8
PAF1-208ENST00000598594 TRAV27A0A087WT01 109 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 A0A087X002 238 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 A0A087X0T9 212 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 IGHV3-72A0A0B4J1Y9 119 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 TRAV13-1A0A0B4J241 112 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 IGHV1OR15-9A0A0B4J2B8 117 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 A0A0G2JMM0 328 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 PNMA8CA0A1B0GUJ8 204 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 A0A1W2PPB8 328 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 KIR3DP1A8MWS1 328 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 INS-IGF2F8WCM5 200 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 BUB1B-PAK6H3BSN5 160 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 CDC42EP2O14613 210 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 LY6G6DO95868 133 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 IGHV3-11P01762 117 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 CXCL1P09341 107 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 CRHBPP24387 322 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 S100A4P26447 101 aaKnown RBP3.79□□□□□ -1.8
PAF1-208ENST00000598594 LINC00205P59089 165 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 CCL20P78556 96 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 AADACL3Q5VUY0 350 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 SAXO1Q8IYX7 474 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 SUMF2Q8NBJ7 301 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 OR8D4Q8NGM9 314 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 SLC25A46Q96AG3 418 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 CIB3Q96Q77 187 aaPredicted RBP3.79□□□□□ -1.8
PAF1-208ENST00000598594 CHAC1Q9BUX1 264 aa3.79□□□□□ -1.8
PAF1-208ENST00000598594 KRTAP3-1Q9BYR8 98 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms