RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 C21orf62Q9NYP8 219 aa13.39□□□□□ -0.27
USHBP1-209ENST00000598570 PEMTQ9UBM1 199 aa13.39□□□□□ -0.27
USHBP1-209ENST00000598570 A0A1B0GU03 582 aa13.38□□□□□ -0.27
USHBP1-209ENST00000598570 SFT2D2O95562 160 aa13.38□□□□□ -0.27
USHBP1-209ENST00000598570 CTSGP08311 255 aa13.38□□□□□ -0.27
USHBP1-209ENST00000598570 ANXA3P12429 323 aa13.38□□□□□ -0.27
USHBP1-209ENST00000598570 ADMP35318 185 aa13.38□□□□□ -0.27
USHBP1-209ENST00000598570 CCR6P51684 374 aa13.38□□□□□ -0.27
USHBP1-209ENST00000598570 ELLP55199 621 aaPredicted RBP13.38□□□□□ -0.27
USHBP1-209ENST00000598570 DCTN2Q13561 401 aaKnown RBP13.38□□□□□ -0.27
USHBP1-209ENST00000598570 ANKRD55Q3KP44 614 aa13.38□□□□□ -0.27
USHBP1-209ENST00000598570 HSPB7Q9UBY9 170 aa13.38□□□□□ -0.27
USHBP1-209ENST00000598570 CACNG5Q9UF02 275 aa13.38□□□□□ -0.27
USHBP1-209ENST00000598570 S4R3C0 116 aa13.38□□□□□ -0.27
USHBP1-209ENST00000598570 C2orf70A6NJV1 201 aa13.37□□□□□ -0.27
USHBP1-209ENST00000598570 TGOLN2O43493 480 aa13.37□□□□□ -0.27
USHBP1-209ENST00000598570 IFNA17P01571 189 aa13.37□□□□□ -0.27
USHBP1-209ENST00000598570 IGHV3-23P01764 117 aa13.37□□□□□ -0.27
USHBP1-209ENST00000598570 SULT1A3P0DMM9 295 aa13.37□□□□□ -0.27
USHBP1-209ENST00000598570 SULT1A4P0DMN0 295 aa13.37□□□□□ -0.27
USHBP1-209ENST00000598570 SPNP16150 400 aa13.37□□□□□ -0.27
USHBP1-209ENST00000598570 PPP1R1AQ13522 171 aa13.37□□□□□ -0.27
USHBP1-209ENST00000598570 FAM106AQ4KMX7 169 aa13.37□□□□□ -0.27
USHBP1-209ENST00000598570 CENPSQ8N2Z9 138 aa13.37□□□□□ -0.27
USHBP1-209ENST00000598570 S100ZQ8WXG8 99 aa13.37□□□□□ -0.27
USHBP1-209ENST00000598570 GAR1Q9NY12 217 aaKnown RBP13.37□□□□□ -0.27
USHBP1-209ENST00000598570 PRR13Q9NZ81 148 aa13.37□□□□□ -0.27
USHBP1-209ENST00000598570 PTTG2Q9NZH5 202 aa13.37□□□□□ -0.27
USHBP1-209ENST00000598570 TMEM213A2RRL7 107 aa13.36□□□□□ -0.27
USHBP1-209ENST00000598570 SMCO1Q147U7 214 aa13.36□□□□□ -0.27
USHBP1-209ENST00000598570 TMED4Q7Z7H5 227 aa13.36□□□□□ -0.27
USHBP1-209ENST00000598570 Q8N1Y9 231 aa13.36□□□□□ -0.27
USHBP1-209ENST00000598570 CHRDL1Q9BU40 450 aa13.36□□□□□ -0.27
USHBP1-209ENST00000598570 ZC4H2Q9NQZ6 224 aa13.36□□□□□ -0.27
USHBP1-209ENST00000598570 CENPXA8MT69 81 aa13.35□□□□□ -0.27
USHBP1-209ENST00000598570 K7EMT4 169 aa13.35□□□□□ -0.27
USHBP1-209ENST00000598570 CORTO00230 105 aa13.35□□□□□ -0.27
USHBP1-209ENST00000598570 MT-CO2P00403 227 aa13.35□□□□□ -0.27
USHBP1-209ENST00000598570 FOLR2P14207 255 aa13.35□□□□□ -0.27
USHBP1-209ENST00000598570 CBLN1P23435 193 aa13.35□□□□□ -0.27
USHBP1-209ENST00000598570 GPR183P32249 361 aa13.35□□□□□ -0.27
USHBP1-209ENST00000598570 SNCAP37840 140 aa13.35□□□□□ -0.27
USHBP1-209ENST00000598570 HTR2BP41595 481 aa13.35□□□□□ -0.27
USHBP1-209ENST00000598570 SUB1P53999 127 aaKnown RBP eCLIP13.35□□□□□ -0.27
USHBP1-209ENST00000598570 MFAP4P55083 255 aa13.35□□□□□ -0.27
USHBP1-209ENST00000598570 TNFRSF9Q07011 255 aa13.35□□□□□ -0.27
USHBP1-209ENST00000598570 DEFB114Q30KQ6 69 aa13.35□□□□□ -0.27
USHBP1-209ENST00000598570 C2orf83Q53S99 150 aa13.35□□□□□ -0.27
USHBP1-209ENST00000598570 PLET1Q6UQ28 207 aa13.35□□□□□ -0.27
USHBP1-209ENST00000598570 UNQ9165/PRO28630Q6UXU0 137 aa13.35□□□□□ -0.27
USHBP1-209ENST00000598570 TMEM170AQ8WVE7 144 aa13.35□□□□□ -0.27
USHBP1-209ENST00000598570 PRR25Q96S07 402 aa13.35□□□□□ -0.27
USHBP1-209ENST00000598570 PDCD10Q9BUL8 212 aa13.35□□□□□ -0.27
USHBP1-209ENST00000598570 TECRQ9NZ01 308 aaKnown RBP13.35□□□□□ -0.27
USHBP1-209ENST00000598570 TMED3Q9Y3Q3 217 aa13.35□□□□□ -0.27
USHBP1-209ENST00000598570 C9orf170A2RU37 121 aa13.34□□□□□ -0.27
USHBP1-209ENST00000598570 A8MZ25 164 aa13.34□□□□□ -0.27
USHBP1-209ENST00000598570 NDUFA4O00483 81 aa13.34□□□□□ -0.27
USHBP1-209ENST00000598570 GP9P14770 177 aa13.34□□□□□ -0.27
USHBP1-209ENST00000598570 INPP1P49441 399 aa13.34□□□□□ -0.27
USHBP1-209ENST00000598570 ATP5IP56385 69 aaPredicted RBP13.34□□□□□ -0.27
USHBP1-209ENST00000598570 SPINK9Q5DT21 86 aa13.34□□□□□ -0.27
USHBP1-209ENST00000598570 TMEM190Q8WZ59 177 aa13.34□□□□□ -0.27
USHBP1-209ENST00000598570 MARC2Q969Z3 335 aa13.34□□□□□ -0.27
USHBP1-209ENST00000598570 B9D2Q9BPU9 175 aa13.34□□□□□ -0.27
USHBP1-209ENST00000598570 OR2T8A6NH00 312 aa13.33□□□□□ -0.28
USHBP1-209ENST00000598570 ZNF785A8K8V0 405 aa13.33□□□□□ -0.28
USHBP1-209ENST00000598570 LYRM1O43325 122 aa13.33□□□□□ -0.28
USHBP1-209ENST00000598570 RNASE11Q8TAA1 199 aaKnown RBP13.33□□□□□ -0.28
USHBP1-209ENST00000598570 OR10C1Q96KK4 312 aa13.33□□□□□ -0.28
USHBP1-209ENST00000598570 FNDC4Q9H6D8 234 aaPredicted RBP13.33□□□□□ -0.28
USHBP1-209ENST00000598570 FLVCR2Q9UPI3 526 aa13.33□□□□□ -0.28
USHBP1-209ENST00000598570 FAM90A26D6RGX4 464 aa13.32□□□□□ -0.28
USHBP1-209ENST00000598570 RNASEH2CQ8TDP1 164 aaKnown RBP13.32□□□□□ -0.28
USHBP1-209ENST00000598570 MISP3Q96FF7 219 aa13.32□□□□□ -0.28
USHBP1-209ENST00000598570 PALMDQ9NP74 551 aa13.32□□□□□ -0.28
USHBP1-209ENST00000598570 MRPL27Q9P0M9 148 aaKnown RBP13.32□□□□□ -0.28
USHBP1-209ENST00000598570 U3KQ87 197 aa13.32□□□□□ -0.28
USHBP1-209ENST00000598570 DNAH9Q9NYC9 4486 aa13.31□□□□□ -0.28
USHBP1-209ENST00000598570 IZUMO1RA6ND01 250 aa13.31□□□□□ -0.28
USHBP1-209ENST00000598570 C15orf62A8K5M9 175 aa13.31□□□□□ -0.28
USHBP1-209ENST00000598570 TMEM50AO95807 157 aa13.31□□□□□ -0.28
USHBP1-209ENST00000598570 OR4E1P0C645 316 aa13.31□□□□□ -0.28
USHBP1-209ENST00000598570 VAMP1P23763 118 aa13.31□□□□□ -0.28
USHBP1-209ENST00000598570 HOXA1P49639 335 aaPredicted RBP13.31□□□□□ -0.28
USHBP1-209ENST00000598570 DHRS2Q13268 280 aa13.31□□□□□ -0.28
USHBP1-209ENST00000598570 ASAH1Q13510 395 aa13.31□□□□□ -0.28
USHBP1-209ENST00000598570 LCN12Q6JVE5 192 aa13.31□□□□□ -0.28
USHBP1-209ENST00000598570 LYG2Q86SG7 212 aa13.31□□□□□ -0.28
USHBP1-209ENST00000598570 OR4X1Q8NH49 305 aa13.31□□□□□ -0.28
USHBP1-209ENST00000598570 ENY2Q9NPA8 101 aa13.31□□□□□ -0.28
USHBP1-209ENST00000598570 TBC1D24Q9ULP9 559 aa13.31□□□□□ -0.28
USHBP1-209ENST00000598570 UFC1Q9Y3C8 167 aa13.31□□□□□ -0.28
USHBP1-209ENST00000598570 IGHV3-21A0A0B4J1V1 117 aa13.3□□□□□ -0.28
USHBP1-209ENST00000598570 TCRBP04435 133 aa13.3□□□□□ -0.28
USHBP1-209ENST00000598570 EDN2P20800 178 aa13.3□□□□□ -0.28
USHBP1-209ENST00000598570 CD300EQ496F6 205 aaPredicted RBP13.3□□□□□ -0.28
USHBP1-209ENST00000598570 TM4SF20Q53R12 229 aa13.3□□□□□ -0.28
USHBP1-209ENST00000598570 HAPLN4Q86UW8 402 aa13.3□□□□□ -0.28
USHBP1-209ENST00000598570 TMEM116Q8NCL8 245 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms