RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 SCARB1Q8WTV0 552 aa7.97□□□□□ -1.13
VRK3-214ENST00000598553 ST6GAL2Q96JF0 529 aa7.97□□□□□ -1.13
VRK3-214ENST00000598553 TP53RKQ96S44 253 aa7.97□□□□□ -1.13
VRK3-214ENST00000598553 SPATA25Q9BR10 227 aa7.97□□□□□ -1.13
VRK3-214ENST00000598553 ZNF436Q9C0F3 470 aaPredicted RBP7.97□□□□□ -1.13
VRK3-214ENST00000598553 TUBA4BQ9H853 241 aa7.97□□□□□ -1.13
VRK3-214ENST00000598553 F11RQ9Y624 299 aaKnown RBP7.97□□□□□ -1.13
VRK3-214ENST00000598553 OR11H12B2RN74 326 aa7.96□□□□□ -1.14
VRK3-214ENST00000598553 INMT-MINDY4F8WBC2 141 aa7.96□□□□□ -1.14
VRK3-214ENST00000598553 CYB5BO43169 146 aa7.96□□□□□ -1.14
VRK3-214ENST00000598553 IGKV1-5P01602 117 aa7.96□□□□□ -1.14
VRK3-214ENST00000598553 CD3DP04234 171 aa7.96□□□□□ -1.14
VRK3-214ENST00000598553 C8orf88P0DMB2 117 aa7.96□□□□□ -1.14
VRK3-214ENST00000598553 AP3S2P59780 193 aa7.96□□□□□ -1.14
VRK3-214ENST00000598553 TSPAN5P62079 268 aa7.96□□□□□ -1.14
VRK3-214ENST00000598553 MRPS10P82664 201 aaKnown RBP7.96□□□□□ -1.14
VRK3-214ENST00000598553 FAM106AQ4KMX7 169 aa7.96□□□□□ -1.14
VRK3-214ENST00000598553 HSD17B13Q7Z5P4 300 aaPredicted RBP7.96□□□□□ -1.14
VRK3-214ENST00000598553 NOXA1Q86UR1 476 aa7.96□□□□□ -1.14
VRK3-214ENST00000598553 TOMM5Q8N4H5 51 aa7.96□□□□□ -1.14
VRK3-214ENST00000598553 TMEM190Q8WZ59 177 aa7.96□□□□□ -1.14
VRK3-214ENST00000598553 TRIM63Q969Q1 353 aa7.96□□□□□ -1.14
VRK3-214ENST00000598553 FAM212BQ9NTI7 297 aaPredicted RBP7.96□□□□□ -1.14
VRK3-214ENST00000598553 TMEM14BQ9NUH8 114 aa7.96□□□□□ -1.14
VRK3-214ENST00000598553 SLC2A8Q9NY64 477 aa7.96□□□□□ -1.14
VRK3-214ENST00000598553 THYN1Q9P016 225 aa7.96□□□□□ -1.14
VRK3-214ENST00000598553 UBQLN2Q9UHD9 624 aa7.96□□□□□ -1.14
VRK3-214ENST00000598553 IGHV3-49A0A0A0MS15 119 aa7.95□□□□□ -1.14
VRK3-214ENST00000598553 NAP1L6A6NFF2 107 aa7.95□□□□□ -1.14
VRK3-214ENST00000598553 P0C879 139 aa7.95□□□□□ -1.14
VRK3-214ENST00000598553 LYL1P12980 280 aa7.95□□□□□ -1.14
VRK3-214ENST00000598553 S100A1P23297 94 aa7.95□□□□□ -1.14
VRK3-214ENST00000598553 S100GP29377 79 aa7.95□□□□□ -1.14
VRK3-214ENST00000598553 UCP3P55916 312 aa7.95□□□□□ -1.14
VRK3-214ENST00000598553 RRAS2P62070 204 aaPredicted RBP7.95□□□□□ -1.14
VRK3-214ENST00000598553 SP6Q3SY56 376 aa7.95□□□□□ -1.14
VRK3-214ENST00000598553 LPCAT3Q6P1A2 487 aa7.95□□□□□ -1.14
VRK3-214ENST00000598553 OR2C3Q8N628 320 aa7.95□□□□□ -1.14
VRK3-214ENST00000598553 VN1R17PQ8TDU5 208 aa7.95□□□□□ -1.14
VRK3-214ENST00000598553 DEDD2Q8WXF8 326 aa7.95□□□□□ -1.14
VRK3-214ENST00000598553 LSM10Q969L4 123 aaKnown RBP7.95□□□□□ -1.14
VRK3-214ENST00000598553 MRPL36Q9P0J6 103 aaKnown RBP7.95□□□□□ -1.14
VRK3-214ENST00000598553 MTFP1Q9UDX5 166 aa7.95□□□□□ -1.14
VRK3-214ENST00000598553 ALG5Q9Y673 324 aa7.95□□□□□ -1.14
VRK3-214ENST00000598553 RYR2Q92736 4967 aa7.95□□□□□ -1.14
VRK3-214ENST00000598553 I3L2K1 104 aa7.94□□□□□ -1.14
VRK3-214ENST00000598553 SNAPC5O75971 98 aa7.94□□□□□ -1.14
VRK3-214ENST00000598553 C1QBP02746 253 aa7.94□□□□□ -1.14
VRK3-214ENST00000598553 PIGPP57054 158 aa7.94□□□□□ -1.14
VRK3-214ENST00000598553 ZNF124Q15973 351 aa7.94□□□□□ -1.14
VRK3-214ENST00000598553 SLC38A6Q8IZM9 456 aa7.94□□□□□ -1.14
VRK3-214ENST00000598553 UBAC2Q8NBM4 344 aa7.94□□□□□ -1.14
VRK3-214ENST00000598553 OR5B3Q8NH48 314 aa7.94□□□□□ -1.14
VRK3-214ENST00000598553 LHFPL5Q8TAF8 219 aa7.94□□□□□ -1.14
VRK3-214ENST00000598553 SMIM4Q8WVI0 70 aa7.94□□□□□ -1.14
VRK3-214ENST00000598553 C21orf62Q9NYP8 219 aa7.94□□□□□ -1.14
VRK3-214ENST00000598553 PRNDQ9UKY0 176 aa7.94□□□□□ -1.14
VRK3-214ENST00000598553 AGRNO00468 2067 aa7.93□□□□□ -1.14
VRK3-214ENST00000598553 IGHV3OR16-13A0A075B7E8 117 aa7.93□□□□□ -1.14
VRK3-214ENST00000598553 IGHV3-74A0A0B4J1X5 117 aa7.93□□□□□ -1.14
VRK3-214ENST00000598553 GABARAPH6UMI1 98 aa7.93□□□□□ -1.14
VRK3-214ENST00000598553 CTSGP08311 255 aa7.93□□□□□ -1.14
VRK3-214ENST00000598553 PGAM2P15259 253 aa7.93□□□□□ -1.14
VRK3-214ENST00000598553 ELLP55199 621 aaPredicted RBP7.93□□□□□ -1.14
VRK3-214ENST00000598553 EWSR1Q01844 656 aaKnown RBP eCLIP7.93□□□□□ -1.14
VRK3-214ENST00000598553 ODF3L2Q3SX64 289 aa7.93□□□□□ -1.14
VRK3-214ENST00000598553 Q6ZRM9 215 aa7.93□□□□□ -1.14
VRK3-214ENST00000598553 SLC16A13Q7RTY0 426 aa7.93□□□□□ -1.14
VRK3-214ENST00000598553 OR52B4Q8NGK2 314 aa7.93□□□□□ -1.14
VRK3-214ENST00000598553 OR13C8Q8NGS7 320 aa7.93□□□□□ -1.14
VRK3-214ENST00000598553 MARC2Q969Z3 335 aa7.93□□□□□ -1.14
VRK3-214ENST00000598553 MISP3Q96FF7 219 aa7.93□□□□□ -1.14
VRK3-214ENST00000598553 BSCL2Q96G97 398 aaPredicted RBP7.93□□□□□ -1.14
VRK3-214ENST00000598553 TMEM56Q96MV1 263 aa7.93□□□□□ -1.14
VRK3-214ENST00000598553 ATP6V0BQ99437 205 aa7.93□□□□□ -1.14
VRK3-214ENST00000598553 C20orf24Q9BUV8 137 aa7.93□□□□□ -1.14
VRK3-214ENST00000598553 FKBP11Q9NYL4 201 aa7.93□□□□□ -1.14
VRK3-214ENST00000598553 PRR13Q9NZ81 148 aa7.93□□□□□ -1.14
VRK3-214ENST00000598553 UFC1Q9Y3C8 167 aa7.93□□□□□ -1.14
VRK3-214ENST00000598553 A0A0B4J293 547 aa7.92□□□□□ -1.14
VRK3-214ENST00000598553 LCE6AA0A183 80 aa7.92□□□□□ -1.14
VRK3-214ENST00000598553 C7orf66A4D0T2 115 aa7.92□□□□□ -1.14
VRK3-214ENST00000598553 ST8SIA3O43173 380 aa7.92□□□□□ -1.14
VRK3-214ENST00000598553 PRAF2O60831 178 aa7.92□□□□□ -1.14
VRK3-214ENST00000598553 MT-CO2P00403 227 aa7.92□□□□□ -1.14
VRK3-214ENST00000598553 CD74P04233 296 aa7.92□□□□□ -1.14
VRK3-214ENST00000598553 IFNA6P05013 189 aa7.92□□□□□ -1.14
VRK3-214ENST00000598553 NKX2-5P52952 324 aaPredicted RBP7.92□□□□□ -1.14
VRK3-214ENST00000598553 RND3P61587 244 aa7.92□□□□□ -1.14
VRK3-214ENST00000598553 PRCDQ00LT1 54 aa7.92□□□□□ -1.14
VRK3-214ENST00000598553 IFITM2Q01629 132 aa7.92□□□□□ -1.14
VRK3-214ENST00000598553 MLANAQ16655 118 aa7.92□□□□□ -1.14
VRK3-214ENST00000598553 Q56UQ5 140 aa7.92□□□□□ -1.14
VRK3-214ENST00000598553 RNASE10Q5GAN6 216 aaKnown RBP7.92□□□□□ -1.14
VRK3-214ENST00000598553 SPSB3Q6PJ21 355 aa7.92□□□□□ -1.14
VRK3-214ENST00000598553 H2BFWTQ7Z2G1 175 aa7.92□□□□□ -1.14
VRK3-214ENST00000598553 OR1L6Q8NGR2 347 aa7.92□□□□□ -1.14
VRK3-214ENST00000598553 ZFAND1Q8TCF1 268 aa7.92□□□□□ -1.14
VRK3-214ENST00000598553 MARCH1Q8TCQ1 289 aa7.92□□□□□ -1.14
VRK3-214ENST00000598553 HYLS1Q96M11 299 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms