RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 IGKV1-39P01597 117 aa13.95□□□□□ -0.18
SNRPA-204ENST00000598452 IGKV1D-39P04432 117 aa13.95□□□□□ -0.18
SNRPA-204ENST00000598452 TBPP20226 339 aa13.95□□□□□ -0.18
SNRPA-204ENST00000598452 TFPI2P48307 235 aa13.95□□□□□ -0.18
SNRPA-204ENST00000598452 VBP1P61758 197 aa13.95□□□□□ -0.18
SNRPA-204ENST00000598452 NCS1P62166 190 aa13.95□□□□□ -0.18
SNRPA-204ENST00000598452 PAFAH1B2P68402 229 aa13.95□□□□□ -0.18
SNRPA-204ENST00000598452 TMEM116Q8NCL8 245 aa13.95□□□□□ -0.18
SNRPA-204ENST00000598452 OR10C1Q96KK4 312 aa13.95□□□□□ -0.18
SNRPA-204ENST00000598452 RHPN1-AS1Q9BWJ2 59 aa13.95□□□□□ -0.18
SNRPA-204ENST00000598452 NXF2Q9GZY0 626 aaKnown RBP13.95□□□□□ -0.18
SNRPA-204ENST00000598452 IGKV3-7A0A075B6H7 116 aa13.94□□□□□ -0.18
SNRPA-204ENST00000598452 IGHV3OR16-13A0A075B7E8 117 aa13.94□□□□□ -0.18
SNRPA-204ENST00000598452 TRAV14DV4A0A0A6YYC5 116 aa13.94□□□□□ -0.18
SNRPA-204ENST00000598452 IGHV3-74A0A0B4J1X5 117 aa13.94□□□□□ -0.18
SNRPA-204ENST00000598452 I3L2K1 104 aa13.94□□□□□ -0.18
SNRPA-204ENST00000598452 CHEK1O14757 476 aa13.94□□□□□ -0.18
SNRPA-204ENST00000598452 PGAM2P15259 253 aa13.94□□□□□ -0.18
SNRPA-204ENST00000598452 ELK1P19419 428 aa13.94□□□□□ -0.18
SNRPA-204ENST00000598452 SNCAP37840 140 aa13.94□□□□□ -0.18
SNRPA-204ENST00000598452 NPBWR1P48145 328 aa13.94□□□□□ -0.18
SNRPA-204ENST00000598452 SUB1P53999 127 aaKnown RBP eCLIP13.94□□□□□ -0.18
SNRPA-204ENST00000598452 RNASE10Q5GAN6 216 aaKnown RBP13.94□□□□□ -0.18
SNRPA-204ENST00000598452 CEMP1Q6PRD7 247 aaPredicted RBP13.94□□□□□ -0.18
SNRPA-204ENST00000598452 ARRDC1Q8N5I2 433 aa13.94□□□□□ -0.18
SNRPA-204ENST00000598452 MRGPRFQ96AM1 343 aa13.94□□□□□ -0.18
SNRPA-204ENST00000598452 PDCD10Q9BUL8 212 aa13.94□□□□□ -0.18
SNRPA-204ENST00000598452 MAP6D1Q9H9H5 199 aa13.94□□□□□ -0.18
SNRPA-204ENST00000598452 CORTO00230 105 aa13.93□□□□□ -0.18
SNRPA-204ENST00000598452 HPGDSO60760 199 aa13.93□□□□□ -0.18
SNRPA-204ENST00000598452 SCGB2A1O75556 95 aa13.93□□□□□ -0.18
SNRPA-204ENST00000598452 MT-CO2P00403 227 aa13.93□□□□□ -0.18
SNRPA-204ENST00000598452 DUSP18Q8NEJ0 188 aa13.93□□□□□ -0.18
SNRPA-204ENST00000598452 ZFAND1Q8TCF1 268 aa13.93□□□□□ -0.18
SNRPA-204ENST00000598452 INS-IGF2F8WCM5 200 aa13.92□□□□□ -0.18
SNRPA-204ENST00000598452 B3GALNT1O75752 331 aa13.92□□□□□ -0.18
SNRPA-204ENST00000598452 AKR1C2P52895 323 aa13.92□□□□□ -0.18
SNRPA-204ENST00000598452 IZUMO4Q1ZYL8 232 aa13.92□□□□□ -0.18
SNRPA-204ENST00000598452 SPINK9Q5DT21 86 aa13.92□□□□□ -0.18
SNRPA-204ENST00000598452 SLC35G3Q8N808 338 aa13.92□□□□□ -0.18
SNRPA-204ENST00000598452 CCDC71LQ8N9Z2 235 aa13.92□□□□□ -0.18
SNRPA-204ENST00000598452 PINX1Q96BK5 328 aaKnown RBP13.92□□□□□ -0.18
SNRPA-204ENST00000598452 M0QYG6 137 aa13.91□□□□□ -0.18
SNRPA-204ENST00000598452 IFNA17P01571 189 aa13.91□□□□□ -0.18
SNRPA-204ENST00000598452 PIGPP57054 158 aa13.91□□□□□ -0.18
SNRPA-204ENST00000598452 GBGT1Q8N5D6 347 aa13.91□□□□□ -0.18
SNRPA-204ENST00000598452 TMEM231Q9H6L2 316 aa13.91□□□□□ -0.18
SNRPA-204ENST00000598452 COPZ2Q9P299 210 aa13.91□□□□□ -0.18
SNRPA-204ENST00000598452 KLK5Q9Y337 293 aaPredicted RBP13.91□□□□□ -0.18
SNRPA-204ENST00000598452 ZNF182P17025 639 aaPredicted RBP13.9□□□□□ -0.18
SNRPA-204ENST00000598452 FAM90A2PQ658T7 463 aa13.9□□□□□ -0.18
SNRPA-204ENST00000598452 LHFPL1Q86WI0 220 aa13.9□□□□□ -0.18
SNRPA-204ENST00000598452 GATAD1Q8WUU5 269 aa13.9□□□□□ -0.18
SNRPA-204ENST00000598452 CSTL1Q9H114 145 aa13.9□□□□□ -0.18
SNRPA-204ENST00000598452 ENY2Q9NPA8 101 aa13.9□□□□□ -0.18
SNRPA-204ENST00000598452 MTFP1Q9UDX5 166 aa13.9□□□□□ -0.18
SNRPA-204ENST00000598452 C3orf85A0A1B0GTC6 90 aa13.89□□□□□ -0.19
SNRPA-204ENST00000598452 RNASE12Q5GAN4 147 aaKnown RBP13.89□□□□□ -0.19
SNRPA-204ENST00000598452 ZNF600Q6ZNG1 722 aa13.89□□□□□ -0.19
SNRPA-204ENST00000598452 TERB2Q8NHR7 220 aa13.89□□□□□ -0.19
SNRPA-204ENST00000598452 RRNAD1Q96FB5 475 aaKnown RBP13.89□□□□□ -0.19
SNRPA-204ENST00000598452 KLK11Q9UBX7 282 aa13.89□□□□□ -0.19
SNRPA-204ENST00000598452 MPTX1A8MV57 137 aa13.88□□□□□ -0.19
SNRPA-204ENST00000598452 DFFBO76075 338 aa13.88□□□□□ -0.19
SNRPA-204ENST00000598452 APOHP02749 345 aaPredicted RBP13.88□□□□□ -0.19
SNRPA-204ENST00000598452 CD3DP04234 171 aa13.88□□□□□ -0.19
SNRPA-204ENST00000598452 PI3P19957 117 aa13.88□□□□□ -0.19
SNRPA-204ENST00000598452 TAS2R19P59542 299 aa13.88□□□□□ -0.19
SNRPA-204ENST00000598452 SSBP1Q04837 148 aaKnown RBP13.88□□□□□ -0.19
SNRPA-204ENST00000598452 TRIM16LQ309B1 348 aa13.88□□□□□ -0.19
SNRPA-204ENST00000598452 TOMM20LQ6UXN7 152 aa13.88□□□□□ -0.19
SNRPA-204ENST00000598452 TCF24Q7RTU0 167 aa13.88□□□□□ -0.19
SNRPA-204ENST00000598452 LILRB2Q8N423 598 aa13.88□□□□□ -0.19
SNRPA-204ENST00000598452 TMEM229BQ8NBD8 167 aa13.88□□□□□ -0.19
SNRPA-204ENST00000598452 ST8SIA2Q92186 375 aa13.88□□□□□ -0.19
SNRPA-204ENST00000598452 EXTL2Q9UBQ6 330 aa13.88□□□□□ -0.19
SNRPA-204ENST00000598452 TRAV2A0A0B4J234 112 aa13.87□□□□□ -0.19
SNRPA-204ENST00000598452 IGHV3-66A0A0C4DH42 116 aa13.87□□□□□ -0.19
SNRPA-204ENST00000598452 A0A1W2PS18 150 aa13.87□□□□□ -0.19
SNRPA-204ENST00000598452 DNASE2O00115 360 aaPredicted RBP13.87□□□□□ -0.19
SNRPA-204ENST00000598452 ST8SIA3O43173 380 aa13.87□□□□□ -0.19
SNRPA-204ENST00000598452 MRPS10P82664 201 aaKnown RBP13.87□□□□□ -0.19
SNRPA-204ENST00000598452 FAM219AQ8IW50 185 aa13.87□□□□□ -0.19
SNRPA-204ENST00000598452 OR52I2Q8NH67 350 aa13.87□□□□□ -0.19
SNRPA-204ENST00000598452 RNASE11Q8TAA1 199 aaKnown RBP13.87□□□□□ -0.19
SNRPA-204ENST00000598452 PHLDA1Q8WV24 401 aaPredicted RBP13.87□□□□□ -0.19
SNRPA-204ENST00000598452 TP53RKQ96S44 253 aa13.87□□□□□ -0.19
SNRPA-204ENST00000598452 AGRNO00468 2067 aa13.87□□□□□ -0.19
SNRPA-204ENST00000598452 GABARAPO95166 117 aa13.86□□□□□ -0.19
SNRPA-204ENST00000598452 TMEM50AO95807 157 aa13.86□□□□□ -0.19
SNRPA-204ENST00000598452 IGKV1-5P01602 117 aa13.86□□□□□ -0.19
SNRPA-204ENST00000598452 HOXA1P49639 335 aaPredicted RBP13.86□□□□□ -0.19
SNRPA-204ENST00000598452 RPP25LQ8N5L8 163 aaKnown RBP13.86□□□□□ -0.19
SNRPA-204ENST00000598452 NARS2Q96I59 477 aaKnown RBP13.86□□□□□ -0.19
SNRPA-204ENST00000598452 RARRES2Q99969 163 aa13.86□□□□□ -0.19
SNRPA-204ENST00000598452 VSIRQ9H7M9 311 aa13.86□□□□□ -0.19
SNRPA-204ENST00000598452 PUS1Q9Y606 427 aaKnown RBP eCLIP13.86□□□□□ -0.19
SNRPA-204ENST00000598452 A0A0B4J293 547 aa13.85□□□□□ -0.19
SNRPA-204ENST00000598452 RAB3DO95716 219 aa13.85□□□□□ -0.19
SNRPA-204ENST00000598452 CD74P04233 296 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms