RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 PINX1Q96BK5 328 aaKnown RBP17.12■□□□□ 0.33
CHMP2A-204ENST00000597848 CXorf58Q96LI9 332 aa17.12■□□□□ 0.33
CHMP2A-204ENST00000597848 CIB3Q96Q77 187 aaPredicted RBP17.12■□□□□ 0.33
CHMP2A-204ENST00000597848 MED28Q9H204 178 aa17.12■□□□□ 0.33
CHMP2A-204ENST00000597848 MGAT4CQ9UBM8 478 aa17.12■□□□□ 0.33
CHMP2A-204ENST00000597848 U3KQ87 197 aa17.12■□□□□ 0.33
CHMP2A-204ENST00000597848 SSSCA1O60232 199 aa17.11■□□□□ 0.33
CHMP2A-204ENST00000597848 MBPP02686 304 aaPredicted RBP17.11■□□□□ 0.33
CHMP2A-204ENST00000597848 PF4P02776 101 aa17.11■□□□□ 0.33
CHMP2A-204ENST00000597848 NPY1RP25929 384 aa17.11■□□□□ 0.33
CHMP2A-204ENST00000597848 RUNX1Q01196 453 aa17.11■□□□□ 0.33
CHMP2A-204ENST00000597848 BSXQ3C1V8 233 aa17.11■□□□□ 0.33
CHMP2A-204ENST00000597848 ZNF343Q6P1L6 599 aa17.11■□□□□ 0.33
CHMP2A-204ENST00000597848 NOXA1Q86UR1 476 aa17.11■□□□□ 0.33
CHMP2A-204ENST00000597848 OR11H1Q8NG94 326 aa17.11■□□□□ 0.33
CHMP2A-204ENST00000597848 OR1N2Q8NGR9 330 aa17.11■□□□□ 0.33
CHMP2A-204ENST00000597848 DPF1Q92782 380 aa17.11■□□□□ 0.33
CHMP2A-204ENST00000597848 RAX2Q96IS3 184 aa17.11■□□□□ 0.33
CHMP2A-204ENST00000597848 PAIP2BQ9ULR5 123 aaKnown RBP17.11■□□□□ 0.33
CHMP2A-204ENST00000597848 MFSD2BA6NFX1 497 aa17.1■□□□□ 0.33
CHMP2A-204ENST00000597848 CCL24O00175 119 aa17.1■□□□□ 0.33
CHMP2A-204ENST00000597848 C2orf83Q53S99 150 aa17.1■□□□□ 0.33
CHMP2A-204ENST00000597848 VN1R17PQ8TDU5 208 aa17.1■□□□□ 0.33
CHMP2A-204ENST00000597848 PEF1Q9UBV8 284 aaKnown RBP17.1■□□□□ 0.33
CHMP2A-204ENST00000597848 LSM5Q9Y4Y9 91 aaKnown RBP17.1■□□□□ 0.33
CHMP2A-204ENST00000597848 CORTO00230 105 aa17.09■□□□□ 0.33
CHMP2A-204ENST00000597848 LY86O95711 162 aa17.09■□□□□ 0.33
CHMP2A-204ENST00000597848 MT-CO2P00403 227 aa17.09■□□□□ 0.33
CHMP2A-204ENST00000597848 HSPB1P04792 205 aaKnown RBP17.09■□□□□ 0.33
CHMP2A-204ENST00000597848 MYCNOSP40205 109 aa17.09■□□□□ 0.33
CHMP2A-204ENST00000597848 RPP30P78346 268 aaKnown RBP17.09■□□□□ 0.33
CHMP2A-204ENST00000597848 SCARB1Q8WTV0 552 aa17.09■□□□□ 0.33
CHMP2A-204ENST00000597848 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.08■□□□□ 0.32
CHMP2A-204ENST00000597848 TRBV7-1A0A0A6YYK4 115 aa17.08■□□□□ 0.32
CHMP2A-204ENST00000597848 K7EIM0 57 aa17.08■□□□□ 0.32
CHMP2A-204ENST00000597848 S100A10P60903 97 aa17.08■□□□□ 0.32
CHMP2A-204ENST00000597848 CYCSP99999 105 aaKnown RBP17.08■□□□□ 0.32
CHMP2A-204ENST00000597848 SPANXN5Q5MJ07 72 aa17.08■□□□□ 0.32
CHMP2A-204ENST00000597848 CLEC19AQ6UXS0 136 aa17.08■□□□□ 0.32
CHMP2A-204ENST00000597848 RAB40CQ96S21 281 aa17.08■□□□□ 0.32
CHMP2A-204ENST00000597848 RANGRFQ9HD47 186 aaPredicted RBP17.08■□□□□ 0.32
CHMP2A-204ENST00000597848 C21orf62Q9NYP8 219 aa17.08■□□□□ 0.32
CHMP2A-204ENST00000597848 PSENENQ9NZ42 101 aa17.08■□□□□ 0.32
CHMP2A-204ENST00000597848 RCL1Q9Y2P8 373 aaKnown RBP17.08■□□□□ 0.32
CHMP2A-204ENST00000597848 IGHV4OR15-8A0A075B7B6 117 aa17.07■□□□□ 0.32
CHMP2A-204ENST00000597848 A0A087WW49 117 aa17.07■□□□□ 0.32
CHMP2A-204ENST00000597848 LINC01619G3V211 115 aa17.07■□□□□ 0.32
CHMP2A-204ENST00000597848 I3L2K1 104 aa17.07■□□□□ 0.32
CHMP2A-204ENST00000597848 K7EPK0 472 aa17.07■□□□□ 0.32
CHMP2A-204ENST00000597848 L7N2F9 121 aa17.07■□□□□ 0.32
CHMP2A-204ENST00000597848 IGHV3-48P01763 117 aa17.07■□□□□ 0.32
CHMP2A-204ENST00000597848 IFNA4P05014 189 aa17.07■□□□□ 0.32
CHMP2A-204ENST00000597848 OPRK1P41145 380 aa17.07■□□□□ 0.32
CHMP2A-204ENST00000597848 ATP5IP56385 69 aaPredicted RBP17.07■□□□□ 0.32
CHMP2A-204ENST00000597848 H2BFSP57053 126 aa17.07■□□□□ 0.32
CHMP2A-204ENST00000597848 VAMP2P63027 116 aa17.07■□□□□ 0.32
CHMP2A-204ENST00000597848 ZNF616Q08AN1 781 aa17.07■□□□□ 0.32
CHMP2A-204ENST00000597848 FCN2Q15485 313 aa17.07■□□□□ 0.32
CHMP2A-204ENST00000597848 FAM209BQ5JX69 171 aa17.07■□□□□ 0.32
CHMP2A-204ENST00000597848 PVRIGQ6DKI7 326 aa17.07■□□□□ 0.32
CHMP2A-204ENST00000597848 ETV3LQ6ZN32 361 aa17.07■□□□□ 0.32
CHMP2A-204ENST00000597848 ZNF502Q8TBZ5 544 aa17.07■□□□□ 0.32
CHMP2A-204ENST00000597848 TMEM170AQ8WVE7 144 aa17.07■□□□□ 0.32
CHMP2A-204ENST00000597848 H3BP45 60 aa17.06■□□□□ 0.32
CHMP2A-204ENST00000597848 TRBV12-3P01733 135 aa17.06■□□□□ 0.32
CHMP2A-204ENST00000597848 CLEC3BP05452 202 aa17.06■□□□□ 0.32
CHMP2A-204ENST00000597848 OR8U8P0C7N1 319 aa17.06■□□□□ 0.32
CHMP2A-204ENST00000597848 RAB11AP62491 216 aa17.06■□□□□ 0.32
CHMP2A-204ENST00000597848 IL15RAQ13261 267 aa17.06■□□□□ 0.32
CHMP2A-204ENST00000597848 RAB32Q13637 225 aa17.06■□□□□ 0.32
CHMP2A-204ENST00000597848 UBAC2Q8NBM4 344 aa17.06■□□□□ 0.32
CHMP2A-204ENST00000597848 RNASEH2CQ8TDP1 164 aaKnown RBP17.06■□□□□ 0.32
CHMP2A-204ENST00000597848 SMIM8Q96KF7 97 aa17.06■□□□□ 0.32
CHMP2A-204ENST00000597848 CCDC140Q96MF4 163 aa17.06■□□□□ 0.32
CHMP2A-204ENST00000597848 NMES1Q9C002 83 aa17.06■□□□□ 0.32
CHMP2A-204ENST00000597848 STRAPQ9Y3F4 350 aaKnown RBP17.06■□□□□ 0.32
CHMP2A-204ENST00000597848 RPS10-NUDT3A0A1W2PQS6 291 aa17.05■□□□□ 0.32
CHMP2A-204ENST00000597848 MFAP4P55083 255 aa17.05■□□□□ 0.32
CHMP2A-204ENST00000597848 MLANAQ16655 118 aa17.05■□□□□ 0.32
CHMP2A-204ENST00000597848 Q56UQ5 140 aa17.05■□□□□ 0.32
CHMP2A-204ENST00000597848 ACSM6Q6P461 480 aa17.05■□□□□ 0.32
CHMP2A-204ENST00000597848 OR4C12Q96R67 309 aa17.05■□□□□ 0.32
CHMP2A-204ENST00000597848 C15orf62A8K5M9 175 aa17.04■□□□□ 0.32
CHMP2A-204ENST00000597848 PPP5D1E7EU14 171 aa17.04■□□□□ 0.32
CHMP2A-204ENST00000597848 TMEM50AO95807 157 aa17.04■□□□□ 0.32
CHMP2A-204ENST00000597848 CXCL3P19876 107 aa17.04■□□□□ 0.32
CHMP2A-204ENST00000597848 PVALBP20472 110 aaPredicted RBP17.04■□□□□ 0.32
CHMP2A-204ENST00000597848 GPR183P32249 361 aa17.04■□□□□ 0.32
CHMP2A-204ENST00000597848 ARL3P36405 182 aa17.04■□□□□ 0.32
CHMP2A-204ENST00000597848 LRRC37A5PQ49AS3 106 aa17.04■□□□□ 0.32
CHMP2A-204ENST00000597848 ZP3P21754 424 aa17.03■□□□□ 0.32
CHMP2A-204ENST00000597848 SLURP1P55000 103 aa17.03■□□□□ 0.32
CHMP2A-204ENST00000597848 PAX9P55771 341 aa17.03■□□□□ 0.32
CHMP2A-204ENST00000597848 TAS2R30P59541 319 aa17.03■□□□□ 0.32
CHMP2A-204ENST00000597848 RRAS2P62070 204 aaPredicted RBP17.03■□□□□ 0.32
CHMP2A-204ENST00000597848 OR11H7Q8NGC8 314 aa17.03■□□□□ 0.32
CHMP2A-204ENST00000597848 WDR89Q96FK6 387 aaPredicted RBP17.03■□□□□ 0.32
CHMP2A-204ENST00000597848 FNDC4Q9H6D8 234 aaPredicted RBP17.03■□□□□ 0.32
CHMP2A-204ENST00000597848 ZC4H2Q9NQZ6 224 aa17.03■□□□□ 0.32
CHMP2A-204ENST00000597848 OR2T8A6NH00 312 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms