RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 TRBV7-1A0A0A6YYK4 115 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 ANKRD34BA5PLL1 514 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 MFSD2BA6NFX1 497 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 FAM25EA8MYX2 175 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 LINC01619G3V211 115 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 CORTO00230 105 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 SYNGR2O43760 224 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 LY86O95711 162 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 OR8U8P0C7N1 319 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 NKX2-1P43699 371 aaPredicted RBP6.45□□□□□ -1.38
VRK3-211ENST00000596445 ATP5IP56385 69 aaPredicted RBP6.45□□□□□ -1.38
VRK3-211ENST00000596445 FHL3Q13643 280 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 OXA1LQ15070 435 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 C2orf83Q53S99 150 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 GSG1LQ6UXU4 331 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 NOXA1Q86UR1 476 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 ZBTB8BQ8NAP8 495 aaPredicted RBP6.45□□□□□ -1.38
VRK3-211ENST00000596445 SLC24A4Q8NFF2 622 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 DPF1Q92782 380 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 EEF1AKMT3Q96AZ1 226 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 MISP3Q96FF7 219 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 C2orf50Q96LR7 162 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 DUX3Q96PT4 197 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 CIB3Q96Q77 187 aaPredicted RBP6.45□□□□□ -1.38
VRK3-211ENST00000596445 ATP6V0BQ99437 205 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 MAGT1Q9H0U3 335 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 RANGRFQ9HD47 186 aaPredicted RBP6.45□□□□□ -1.38
VRK3-211ENST00000596445 GSKIPQ9P0R6 139 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 PEF1Q9UBV8 284 aaKnown RBP6.45□□□□□ -1.38
VRK3-211ENST00000596445 ALG5Q9Y673 324 aa6.45□□□□□ -1.38
VRK3-211ENST00000596445 IGHV4OR15-8A0A075B7B6 117 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 A0A087WW49 117 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 I3L2K1 104 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 K7EIM0 57 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 WRBO00258 174 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 SSNA1O43805 119 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 MT-CO2P00403 227 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 IFNA10P01566 189 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 TRBV12-3P01733 135 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 MBPP02686 304 aaPredicted RBP6.44□□□□□ -1.38
VRK3-211ENST00000596445 IAPPP10997 89 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 NPY1RP25929 384 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 POLR2GP62487 172 aaKnown RBP eCLIP6.44□□□□□ -1.38
VRK3-211ENST00000596445 C11orf87Q6NUJ2 197 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 TREML4Q6UXN2 200 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 LINC00482Q8N8I6 264 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 WFDC9Q8NEX5 89 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 ZNF502Q8TBZ5 544 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 RNASEH2CQ8TDP1 164 aaKnown RBP6.44□□□□□ -1.38
VRK3-211ENST00000596445 SCARB1Q8WTV0 552 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 TMEM170AQ8WVE7 144 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 CCDC140Q96MF4 163 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 S4R3C0 116 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 NBEAL1Q6ZS30 2694 aa6.44□□□□□ -1.38
VRK3-211ENST00000596445 NOTCH3Q9UM47 2321 aa6.43□□□□□ -1.38
VRK3-211ENST00000596445 IGHV3-21A0A0B4J1V1 117 aa6.43□□□□□ -1.38
VRK3-211ENST00000596445 BMPR1BO00238 502 aa6.43□□□□□ -1.38
VRK3-211ENST00000596445 GOSR2O14653 212 aa6.43□□□□□ -1.38
VRK3-211ENST00000596445 SSSCA1O60232 199 aa6.43□□□□□ -1.38
VRK3-211ENST00000596445 SCGB1D2O95969 90 aa6.43□□□□□ -1.38
VRK3-211ENST00000596445 IGHV3-23P01764 117 aa6.43□□□□□ -1.38
VRK3-211ENST00000596445 CLEC3BP05452 202 aa6.43□□□□□ -1.38
VRK3-211ENST00000596445 CD33P20138 364 aa6.43□□□□□ -1.38
VRK3-211ENST00000596445 ZP3P21754 424 aa6.43□□□□□ -1.38
VRK3-211ENST00000596445 FCGR2BP31994 310 aaPredicted RBP6.43□□□□□ -1.38
VRK3-211ENST00000596445 MFAP4P55083 255 aa6.43□□□□□ -1.38
VRK3-211ENST00000596445 RPP30P78346 268 aaKnown RBP6.43□□□□□ -1.38
VRK3-211ENST00000596445 CYCSP99999 105 aaKnown RBP6.43□□□□□ -1.38
VRK3-211ENST00000596445 IL15RAQ13261 267 aa6.43□□□□□ -1.38
VRK3-211ENST00000596445 CLEC19AQ6UXS0 136 aa6.43□□□□□ -1.38
VRK3-211ENST00000596445 PINX1Q96BK5 328 aaKnown RBP6.43□□□□□ -1.38
VRK3-211ENST00000596445 RAB40CQ96S21 281 aa6.43□□□□□ -1.38
VRK3-211ENST00000596445 TXN2Q99757 166 aa6.43□□□□□ -1.38
VRK3-211ENST00000596445 GAR1Q9NY12 217 aaKnown RBP6.43□□□□□ -1.38
VRK3-211ENST00000596445 C21orf62Q9NYP8 219 aa6.43□□□□□ -1.38
VRK3-211ENST00000596445 RCL1Q9Y2P8 373 aaKnown RBP6.43□□□□□ -1.38
VRK3-211ENST00000596445 RPS10-NUDT3A0A1W2PQS6 291 aa6.42□□□□□ -1.38
VRK3-211ENST00000596445 C15orf62A8K5M9 175 aa6.42□□□□□ -1.38
VRK3-211ENST00000596445 PPP5D1E7EU14 171 aa6.42□□□□□ -1.38
VRK3-211ENST00000596445 F8W735 103 aaPredicted RBP6.42□□□□□ -1.38
VRK3-211ENST00000596445 K7EPK0 472 aa6.42□□□□□ -1.38
VRK3-211ENST00000596445 GGCTO75223 188 aaKnown RBP6.42□□□□□ -1.38
VRK3-211ENST00000596445 SIX6O95475 246 aa6.42□□□□□ -1.38
VRK3-211ENST00000596445 IGHV3-48P01763 117 aa6.42□□□□□ -1.38
VRK3-211ENST00000596445 IFNA4P05014 189 aa6.42□□□□□ -1.38
VRK3-211ENST00000596445 HOXD3P31249 432 aaPredicted RBP6.42□□□□□ -1.38
VRK3-211ENST00000596445 GPR183P32249 361 aa6.42□□□□□ -1.38
VRK3-211ENST00000596445 ARL3P36405 182 aa6.42□□□□□ -1.38
VRK3-211ENST00000596445 OPRK1P41145 380 aa6.42□□□□□ -1.38
VRK3-211ENST00000596445 SLURP1P55000 103 aa6.42□□□□□ -1.38
VRK3-211ENST00000596445 PAX9P55771 341 aa6.42□□□□□ -1.38
VRK3-211ENST00000596445 H2BFSP57053 126 aa6.42□□□□□ -1.38
VRK3-211ENST00000596445 TAS2R30P59541 319 aa6.42□□□□□ -1.38
VRK3-211ENST00000596445 RAB11AP62491 216 aa6.42□□□□□ -1.38
VRK3-211ENST00000596445 KLF5Q13887 457 aaPredicted RBP6.42□□□□□ -1.38
VRK3-211ENST00000596445 RPEL1Q2QD12 228 aa6.42□□□□□ -1.38
VRK3-211ENST00000596445 SPSB3Q6PJ21 355 aa6.42□□□□□ -1.38
VRK3-211ENST00000596445 UBAC2Q8NBM4 344 aa6.42□□□□□ -1.38
VRK3-211ENST00000596445 DCUN1D4Q92564 292 aa6.42□□□□□ -1.38
VRK3-211ENST00000596445 BSCL2Q96G97 398 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms