RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 IFNA4P05014 189 aa11.66□□□□□ -0.54
LINC02560-201ENST00000596379 TSPAN5P62079 268 aa11.66□□□□□ -0.54
LINC02560-201ENST00000596379 PAFAH1B2P68402 229 aa11.66□□□□□ -0.54
LINC02560-201ENST00000596379 PRCDQ00LT1 54 aa11.66□□□□□ -0.54
LINC02560-201ENST00000596379 RBMS2Q15434 407 aaKnown RBP11.66□□□□□ -0.54
LINC02560-201ENST00000596379 LPCAT3Q6P1A2 487 aa11.66□□□□□ -0.54
LINC02560-201ENST00000596379 LILRB2Q8N423 598 aa11.66□□□□□ -0.54
LINC02560-201ENST00000596379 ZNF114Q8NC26 417 aa11.66□□□□□ -0.54
LINC02560-201ENST00000596379 ST8SIA2Q92186 375 aa11.66□□□□□ -0.54
LINC02560-201ENST00000596379 MFFQ9GZY8 342 aa11.66□□□□□ -0.54
LINC02560-201ENST00000596379 FAM212BQ9NTI7 297 aaPredicted RBP11.66□□□□□ -0.54
LINC02560-201ENST00000596379 DEFB4AO15263 64 aa11.65□□□□□ -0.54
LINC02560-201ENST00000596379 APOHP02749 345 aaPredicted RBP11.65□□□□□ -0.54
LINC02560-201ENST00000596379 S100GP29377 79 aa11.65□□□□□ -0.54
LINC02560-201ENST00000596379 HSPE1P61604 102 aaKnown RBP11.65□□□□□ -0.54
LINC02560-201ENST00000596379 ERHP84090 104 aaKnown RBP11.65□□□□□ -0.54
LINC02560-201ENST00000596379 TOMM20LQ6UXN7 152 aa11.65□□□□□ -0.54
LINC02560-201ENST00000596379 GINS3Q9BRX5 216 aa11.65□□□□□ -0.54
LINC02560-201ENST00000596379 C11orf68Q9H3H3 251 aaKnown RBP11.65□□□□□ -0.54
LINC02560-201ENST00000596379 IGHV3-66A0A0C4DH42 116 aa11.64□□□□□ -0.55
LINC02560-201ENST00000596379 DNASE2O00115 360 aaPredicted RBP11.64□□□□□ -0.55
LINC02560-201ENST00000596379 ST8SIA3O43173 380 aa11.64□□□□□ -0.55
LINC02560-201ENST00000596379 DFFBO76075 338 aa11.64□□□□□ -0.55
LINC02560-201ENST00000596379 CA1P00915 261 aaPredicted RBP11.64□□□□□ -0.55
LINC02560-201ENST00000596379 CD5P06127 495 aa11.64□□□□□ -0.55
LINC02560-201ENST00000596379 EIF4EP06730 217 aaKnown RBP11.64□□□□□ -0.55
LINC02560-201ENST00000596379 DEFB131AP59861 70 aa11.64□□□□□ -0.55
LINC02560-201ENST00000596379 LSM3P62310 102 aaKnown RBP11.64□□□□□ -0.55
LINC02560-201ENST00000596379 SPINK9Q5DT21 86 aa11.64□□□□□ -0.55
LINC02560-201ENST00000596379 LEMD1Q68G75 181 aa11.64□□□□□ -0.55
LINC02560-201ENST00000596379 GPX8Q8TED1 209 aa11.64□□□□□ -0.55
LINC02560-201ENST00000596379 MRGPRFQ96AM1 343 aa11.64□□□□□ -0.55
LINC02560-201ENST00000596379 MS4A6AQ9H2W1 248 aa11.64□□□□□ -0.55
LINC02560-201ENST00000596379 VSIRQ9H7M9 311 aa11.64□□□□□ -0.55
LINC02560-201ENST00000596379 RPL11P62913 178 aaKnown RBP11.63□□□□□ -0.55
LINC02560-201ENST00000596379 PRR20EP86478 221 aa11.63□□□□□ -0.55
LINC02560-201ENST00000596379 PRR20CP86479 221 aa11.63□□□□□ -0.55
LINC02560-201ENST00000596379 PRR20DP86480 221 aa11.63□□□□□ -0.55
LINC02560-201ENST00000596379 PRR20BP86481 221 aa11.63□□□□□ -0.55
LINC02560-201ENST00000596379 PRR20AP86496 221 aa11.63□□□□□ -0.55
LINC02560-201ENST00000596379 TMEM187Q14656 261 aa11.63□□□□□ -0.55
LINC02560-201ENST00000596379 IZUMO4Q1ZYL8 232 aa11.63□□□□□ -0.55
LINC02560-201ENST00000596379 DUSP18Q8NEJ0 188 aa11.63□□□□□ -0.55
LINC02560-201ENST00000596379 C2CD4CQ8TF44 421 aa11.63□□□□□ -0.55
LINC02560-201ENST00000596379 AGRNO00468 2067 aa11.63□□□□□ -0.55
LINC02560-201ENST00000596379 NPBWR1P48145 328 aa11.62□□□□□ -0.55
LINC02560-201ENST00000596379 UCP3P55916 312 aa11.62□□□□□ -0.55
LINC02560-201ENST00000596379 KCTD21Q4G0X4 260 aa11.62□□□□□ -0.55
LINC02560-201ENST00000596379 FAM24BQ8N5W8 94 aa11.62□□□□□ -0.55
LINC02560-201ENST00000596379 YIPF6Q96EC8 236 aa11.62□□□□□ -0.55
LINC02560-201ENST00000596379 ZFAND3Q9H8U3 227 aa11.62□□□□□ -0.55
LINC02560-201ENST00000596379 PUS1Q9Y606 427 aaKnown RBP eCLIP11.62□□□□□ -0.55
LINC02560-201ENST00000596379 VPS13DQ5THJ4 4388 aa11.61□□□□□ -0.55
LINC02560-201ENST00000596379 A0A1B0GU03 582 aa11.61□□□□□ -0.55
LINC02560-201ENST00000596379 SMIM31A0A1B0GVY4 71 aa11.61□□□□□ -0.55
LINC02560-201ENST00000596379 TMEM50AO95807 157 aa11.61□□□□□ -0.55
LINC02560-201ENST00000596379 SNCAP37840 140 aa11.61□□□□□ -0.55
LINC02560-201ENST00000596379 ZNF600Q6ZNG1 722 aa11.61□□□□□ -0.55
LINC02560-201ENST00000596379 SNX29P2Q8IUI4 249 aa11.61□□□□□ -0.55
LINC02560-201ENST00000596379 COMMD3Q9UBI1 195 aa11.61□□□□□ -0.55
LINC02560-201ENST00000596379 TRAV2A0A0B4J234 112 aa11.6□□□□□ -0.55
LINC02560-201ENST00000596379 STHQ8IWL8 128 aa11.6□□□□□ -0.55
LINC02560-201ENST00000596379 SCPEP1Q9HB40 452 aa11.6□□□□□ -0.55
LINC02560-201ENST00000596379 RABAC1Q9UI14 185 aa11.6□□□□□ -0.55
LINC02560-201ENST00000596379 A0A0B4J293 547 aa11.59□□□□□ -0.55
LINC02560-201ENST00000596379 IGLL5B9A064 214 aa11.59□□□□□ -0.55
LINC02560-201ENST00000596379 IGKV1-5P01602 117 aa11.59□□□□□ -0.55
LINC02560-201ENST00000596379 NPPCP23582 126 aa11.59□□□□□ -0.55
LINC02560-201ENST00000596379 RCVRNP35243 200 aa11.59□□□□□ -0.55
LINC02560-201ENST00000596379 TCTAP57738 103 aa11.59□□□□□ -0.55
LINC02560-201ENST00000596379 SLC35G3Q8N808 338 aa11.59□□□□□ -0.55
LINC02560-201ENST00000596379 TMEM231Q9H6L2 316 aa11.59□□□□□ -0.55
LINC02560-201ENST00000596379 APLNQ9ULZ1 77 aa11.59□□□□□ -0.55
LINC02560-201ENST00000596379 INS-IGF2F8WCM5 200 aa11.58□□□□□ -0.56
LINC02560-201ENST00000596379 M0QYG6 137 aa11.58□□□□□ -0.56
LINC02560-201ENST00000596379 IFNA17P01571 189 aa11.58□□□□□ -0.56
LINC02560-201ENST00000596379 APOA1P02647 267 aa11.58□□□□□ -0.56
LINC02560-201ENST00000596379 GIG44P09565 113 aaPredicted RBP11.58□□□□□ -0.56
LINC02560-201ENST00000596379 PGAM2P15259 253 aa11.58□□□□□ -0.56
LINC02560-201ENST00000596379 PI3P19957 117 aa11.58□□□□□ -0.56
LINC02560-201ENST00000596379 ETV6P41212 452 aa11.58□□□□□ -0.56
LINC02560-201ENST00000596379 MLANAQ16655 118 aa11.58□□□□□ -0.56
LINC02560-201ENST00000596379 PVRIGQ6DKI7 326 aa11.58□□□□□ -0.56
LINC02560-201ENST00000596379 Q8NAQ8 132 aa11.58□□□□□ -0.56
LINC02560-201ENST00000596379 A0A1W2PS18 150 aa11.57□□□□□ -0.56
LINC02560-201ENST00000596379 C11orf94C9JXX5 98 aa11.57□□□□□ -0.56
LINC02560-201ENST00000596379 P0C879 139 aa11.57□□□□□ -0.56
LINC02560-201ENST00000596379 RBMY1A1P0DJD3 496 aaKnown RBP11.57□□□□□ -0.56
LINC02560-201ENST00000596379 RBMY1CP0DJD4 496 aa11.57□□□□□ -0.56
LINC02560-201ENST00000596379 RNASE2P10153 161 aaKnown RBP11.57□□□□□ -0.56
LINC02560-201ENST00000596379 ELK1P19419 428 aa11.57□□□□□ -0.56
LINC02560-201ENST00000596379 PPP5CP53041 499 aa11.57□□□□□ -0.56
LINC02560-201ENST00000596379 SUB1P53999 127 aaKnown RBP eCLIP11.57□□□□□ -0.56
LINC02560-201ENST00000596379 RND3P61587 244 aa11.57□□□□□ -0.56
LINC02560-201ENST00000596379 RBMY1FQ15415 496 aaKnown RBP11.57□□□□□ -0.56
LINC02560-201ENST00000596379 STXBP6Q8NFX7 210 aa11.57□□□□□ -0.56
LINC02560-201ENST00000596379 TP53RKQ96S44 253 aa11.57□□□□□ -0.56
LINC02560-201ENST00000596379 HRH4Q9H3N8 390 aa11.57□□□□□ -0.56
LINC02560-201ENST00000596379 MRPL36Q9P0J6 103 aaKnown RBP11.57□□□□□ -0.56
LINC02560-201ENST00000596379 DNAH6Q9C0G6 4158 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms