RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 POLR2GP62487 172 aaKnown RBP eCLIP8.12□□□□□ -1.11
LIG1-210ENST00000596332 IAH1Q2TAA2 248 aaPredicted RBP8.12□□□□□ -1.11
LIG1-210ENST00000596332 C2orf83Q53S99 150 aa8.12□□□□□ -1.11
LIG1-210ENST00000596332 SLC25A24Q6NUK1 477 aa8.12□□□□□ -1.11
LIG1-210ENST00000596332 FAM223AQ8IWN6 122 aa8.12□□□□□ -1.11
LIG1-210ENST00000596332 MRPL41Q8IXM3 137 aaKnown RBP8.12□□□□□ -1.11
LIG1-210ENST00000596332 OR11H1Q8NG94 326 aa8.12□□□□□ -1.11
LIG1-210ENST00000596332 OR1S1Q8NH92 325 aa8.12□□□□□ -1.11
LIG1-210ENST00000596332 SCARB1Q8WTV0 552 aa8.12□□□□□ -1.11
LIG1-210ENST00000596332 MAGT1Q9H0U3 335 aa8.12□□□□□ -1.11
LIG1-210ENST00000596332 RCL1Q9Y2P8 373 aaKnown RBP8.12□□□□□ -1.11
LIG1-210ENST00000596332 MGAM2Q2M2H8 2515 aa8.12□□□□□ -1.11
LIG1-210ENST00000596332 IGHV3-21A0A0B4J1V1 117 aa8.11□□□□□ -1.11
LIG1-210ENST00000596332 PIGBOS1A0A0B4J2F0 54 aa8.11□□□□□ -1.11
LIG1-210ENST00000596332 M0QZ24 198 aa8.11□□□□□ -1.11
LIG1-210ENST00000596332 SYNGR2O43760 224 aa8.11□□□□□ -1.11
LIG1-210ENST00000596332 IGHV3-48P01763 117 aa8.11□□□□□ -1.11
LIG1-210ENST00000596332 IGHV3-23P01764 117 aa8.11□□□□□ -1.11
LIG1-210ENST00000596332 CXCL3P19876 107 aa8.11□□□□□ -1.11
LIG1-210ENST00000596332 ADMP35318 185 aa8.11□□□□□ -1.11
LIG1-210ENST00000596332 MYCNOSP40205 109 aa8.11□□□□□ -1.11
LIG1-210ENST00000596332 ATP5G2Q06055 141 aa8.11□□□□□ -1.11
LIG1-210ENST00000596332 UXS1Q8NBZ7 420 aa8.11□□□□□ -1.11
LIG1-210ENST00000596332 OR1N2Q8NGR9 330 aa8.11□□□□□ -1.11
LIG1-210ENST00000596332 VN1R17PQ8TDU5 208 aa8.11□□□□□ -1.11
LIG1-210ENST00000596332 DTD1Q8TEA8 209 aa8.11□□□□□ -1.11
LIG1-210ENST00000596332 C2orf50Q96LR7 162 aa8.11□□□□□ -1.11
LIG1-210ENST00000596332 OR4C12Q96R67 309 aa8.11□□□□□ -1.11
LIG1-210ENST00000596332 A0A0G2JLM5 398 aa8.1□□□□□ -1.11
LIG1-210ENST00000596332 C13orf42A0A1B0GVH6 325 aa8.1□□□□□ -1.11
LIG1-210ENST00000596332 ANKRD34BA5PLL1 514 aa8.1□□□□□ -1.11
LIG1-210ENST00000596332 CEBPZOSA8MTT3 80 aa8.1□□□□□ -1.11
LIG1-210ENST00000596332 PPP5D1E7EU14 171 aa8.1□□□□□ -1.11
LIG1-210ENST00000596332 H0YIZ8 118 aa8.1□□□□□ -1.11
LIG1-210ENST00000596332 MT-CO2P00403 227 aa8.1□□□□□ -1.11
LIG1-210ENST00000596332 IFNA21P01568 189 aa8.1□□□□□ -1.11
LIG1-210ENST00000596332 HSPB1P04792 205 aaKnown RBP8.1□□□□□ -1.11
LIG1-210ENST00000596332 CTSGP08311 255 aa8.1□□□□□ -1.11
LIG1-210ENST00000596332 IAPPP10997 89 aa8.1□□□□□ -1.11
LIG1-210ENST00000596332 DEFA4P12838 97 aa8.1□□□□□ -1.11
LIG1-210ENST00000596332 FCGR2BP31994 310 aaPredicted RBP8.1□□□□□ -1.11
LIG1-210ENST00000596332 HTR2BP41595 481 aa8.1□□□□□ -1.11
LIG1-210ENST00000596332 HOXA1P49639 335 aaPredicted RBP8.1□□□□□ -1.11
LIG1-210ENST00000596332 ERHP84090 104 aaKnown RBP8.1□□□□□ -1.11
LIG1-210ENST00000596332 EXOSC2Q13868 293 aaKnown RBP8.1□□□□□ -1.11
LIG1-210ENST00000596332 KLF5Q13887 457 aaPredicted RBP8.1□□□□□ -1.11
LIG1-210ENST00000596332 KHDC1LQ5JSQ8 128 aa8.1□□□□□ -1.11
LIG1-210ENST00000596332 IL34Q6ZMJ4 242 aa8.1□□□□□ -1.11
LIG1-210ENST00000596332 OR11H7Q8NGC8 314 aa8.1□□□□□ -1.11
LIG1-210ENST00000596332 DLX4Q92988 240 aaPredicted RBP8.1□□□□□ -1.11
LIG1-210ENST00000596332 CHRDL1Q9BU40 450 aa8.1□□□□□ -1.11
LIG1-210ENST00000596332 GPN1Q9HCN4 374 aaPredicted RBP8.1□□□□□ -1.11
LIG1-210ENST00000596332 HEYLQ9NQ87 328 aaPredicted RBP8.1□□□□□ -1.11
LIG1-210ENST00000596332 PEF1Q9UBV8 284 aaKnown RBP8.1□□□□□ -1.11
LIG1-210ENST00000596332 NBEAL1Q6ZS30 2694 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 NUDT19A8MXV4 375 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 K7EPK0 472 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 WRBO00258 174 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 CCNKO75909 580 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 CLEC3BP05452 202 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 NKX2-1P43699 371 aaPredicted RBP8.09□□□□□ -1.11
LIG1-210ENST00000596332 SLURP1P55000 103 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 ZNF616Q08AN1 781 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 FCN2Q15485 313 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 CLEC19AQ6UXS0 136 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 ADAMTSL5Q6ZMM2 481 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 HAPLN4Q86UW8 402 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 SLC24A4Q8NFF2 622 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 OR4F17Q8NGA8 305 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 OR1L6Q8NGR2 347 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 DCUN1D4Q92564 292 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 SMIM8Q96KF7 97 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 OR4F4Q96R69 305 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 PDCD10Q9BUL8 212 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 RNF126Q9BV68 326 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 GSKIPQ9P0R6 139 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 CACFD1Q9UGQ2 172 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 U3KQ87 197 aa8.09□□□□□ -1.11
LIG1-210ENST00000596332 C5orf51A6NDU8 294 aa8.08□□□□□ -1.12
LIG1-210ENST00000596332 LINC01619G3V211 115 aa8.08□□□□□ -1.12
LIG1-210ENST00000596332 GOSR2O14653 212 aa8.08□□□□□ -1.12
LIG1-210ENST00000596332 NPY1RP25929 384 aa8.08□□□□□ -1.12
LIG1-210ENST00000596332 HOXD3P31249 432 aaPredicted RBP8.08□□□□□ -1.12
LIG1-210ENST00000596332 SNCAP37840 140 aa8.08□□□□□ -1.12
LIG1-210ENST00000596332 ARL16Q0P5N6 197 aa8.08□□□□□ -1.12
LIG1-210ENST00000596332 RAB32Q13637 225 aa8.08□□□□□ -1.12
LIG1-210ENST00000596332 PRSS54Q6PEW0 395 aa8.08□□□□□ -1.12
LIG1-210ENST00000596332 TREML4Q6UXN2 200 aa8.08□□□□□ -1.12
LIG1-210ENST00000596332 TMEM14EPQ6UXP3 125 aa8.08□□□□□ -1.12
LIG1-210ENST00000596332 MISP3Q96FF7 219 aa8.08□□□□□ -1.12
LIG1-210ENST00000596332 ATP6V0BQ99437 205 aa8.08□□□□□ -1.12
LIG1-210ENST00000596332 NEURL2Q9BR09 285 aa8.08□□□□□ -1.12
LIG1-210ENST00000596332 RANGRFQ9HD47 186 aaPredicted RBP8.08□□□□□ -1.12
LIG1-210ENST00000596332 TRBV7-1A0A0A6YYK4 115 aa8.07□□□□□ -1.12
LIG1-210ENST00000596332 FAM25EA8MYX2 175 aa8.07□□□□□ -1.12
LIG1-210ENST00000596332 OR2C1O95371 312 aa8.07□□□□□ -1.12
LIG1-210ENST00000596332 EDN2P20800 178 aa8.07□□□□□ -1.12
LIG1-210ENST00000596332 GSG1LQ6UXU4 331 aa8.07□□□□□ -1.12
LIG1-210ENST00000596332 TMEM116Q8NCL8 245 aa8.07□□□□□ -1.12
LIG1-210ENST00000596332 RNASEH2CQ8TDP1 164 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms