RNA–Protein interactions for RNA: ENST00000595564.5

PAF1-204, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PAF1, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-204ENST00000595564 SEC14L6B5MCN3 397 aa11.64□□□□□ -0.55
PAF1-204ENST00000595564 FCN1O00602 326 aa11.64□□□□□ -0.55
PAF1-204ENST00000595564 APELAP0DMC3 54 aa11.64□□□□□ -0.55
PAF1-204ENST00000595564 RPL29P47914 159 aaKnown RBP11.64□□□□□ -0.55
PAF1-204ENST00000595564 FAM74A3Q4VXF1 159 aa11.64□□□□□ -0.55
PAF1-204ENST00000595564 RNASEH2CQ8TDP1 164 aaKnown RBP11.64□□□□□ -0.55
PAF1-204ENST00000595564 CACNG8Q8WXS5 425 aa11.64□□□□□ -0.55
PAF1-204ENST00000595564 SLC35E1Q96K37 410 aa11.64□□□□□ -0.55
PAF1-204ENST00000595564 COL12A1Q99715 3063 aa11.64□□□□□ -0.55
PAF1-204ENST00000595564 IGHV4-61A0A0C4DH41 118 aa11.63□□□□□ -0.55
PAF1-204ENST00000595564 NDUFS8O00217 210 aa11.63□□□□□ -0.55
PAF1-204ENST00000595564 NBR2O15453 112 aa11.63□□□□□ -0.55
PAF1-204ENST00000595564 SNRNP70P08621 437 aaKnown RBP11.63□□□□□ -0.55
PAF1-204ENST00000595564 AREGP15514 252 aa11.63□□□□□ -0.55
PAF1-204ENST00000595564 UBE2E1P51965 193 aa11.63□□□□□ -0.55
PAF1-204ENST00000595564 AKIRIN2Q53H80 203 aa11.63□□□□□ -0.55
PAF1-204ENST00000595564 RBMS3Q6XE24 437 aaKnown RBP11.63□□□□□ -0.55
PAF1-204ENST00000595564 CYB561D1Q8N8Q1 229 aa11.63□□□□□ -0.55
PAF1-204ENST00000595564 OR2T6Q8NHC8 308 aa11.63□□□□□ -0.55
PAF1-204ENST00000595564 PERPQ96FX8 193 aa11.63□□□□□ -0.55
PAF1-204ENST00000595564 EAF1Q96JC9 268 aaPredicted RBP11.63□□□□□ -0.55
PAF1-204ENST00000595564 NPBQ8NG41 125 aa11.63□□□□□ -0.55
PAF1-204ENST00000595564 OR2T10Q8NGZ9 312 aa11.63□□□□□ -0.55
PAF1-204ENST00000595564 SRSF12Q8WXF0 261 aaKnown RBP11.63□□□□□ -0.55
PAF1-204ENST00000595564 NRGNQ92686 78 aa11.63□□□□□ -0.55
PAF1-204ENST00000595564 ACY3Q96HD9 319 aa11.63□□□□□ -0.55
PAF1-204ENST00000595564 VAX2Q9UIW0 290 aa11.63□□□□□ -0.55
PAF1-204ENST00000595564 TBL2Q9Y4P3 447 aaKnown RBP11.63□□□□□ -0.55
PAF1-204ENST00000595564 IGKV1OR2-108A0A075B7D4 117 aa11.62□□□□□ -0.55
PAF1-204ENST00000595564 VWC2LB2RUY7 222 aa11.62□□□□□ -0.55
PAF1-204ENST00000595564 TEX22C9J3V5 150 aa11.62□□□□□ -0.55
PAF1-204ENST00000595564 OR10J1P30954 320 aa11.62□□□□□ -0.55
PAF1-204ENST00000595564 SSBP2P81877 361 aaPredicted RBP11.62□□□□□ -0.55
PAF1-204ENST00000595564 PRR20EP86478 221 aa11.62□□□□□ -0.55
PAF1-204ENST00000595564 PRR20CP86479 221 aa11.62□□□□□ -0.55
PAF1-204ENST00000595564 PRR20DP86480 221 aa11.62□□□□□ -0.55
PAF1-204ENST00000595564 PRR20BP86481 221 aa11.62□□□□□ -0.55
PAF1-204ENST00000595564 PRR20AP86496 221 aa11.62□□□□□ -0.55
PAF1-204ENST00000595564 PMS2P11Q13670 270 aa11.62□□□□□ -0.55
PAF1-204ENST00000595564 FBLN7Q53RD9 439 aa11.62□□□□□ -0.55
PAF1-204ENST00000595564 TMEM88Q6PEY1 159 aa11.62□□□□□ -0.55
PAF1-204ENST00000595564 FNDC4Q9H6D8 234 aaPredicted RBP11.62□□□□□ -0.55
PAF1-204ENST00000595564 SLC45A2Q9UMX9 530 aa11.62□□□□□ -0.55
PAF1-204ENST00000595564 POLR3KQ9Y2Y1 108 aaPredicted RBP11.62□□□□□ -0.55
PAF1-204ENST00000595564 IGHV4-30-2A0A087WSY4 118 aa11.61□□□□□ -0.55
PAF1-204ENST00000595564 M0R036 132 aa11.61□□□□□ -0.55
PAF1-204ENST00000595564 NDUFA3O95167 84 aa11.61□□□□□ -0.55
PAF1-204ENST00000595564 CNIH1O95406 144 aa11.61□□□□□ -0.55
PAF1-204ENST00000595564 LINC00869P0C866 280 aa11.61□□□□□ -0.55
PAF1-204ENST00000595564 C19orf35Q6ZS72 473 aa11.61□□□□□ -0.55
PAF1-204ENST00000595564 ZNF114Q8NC26 417 aa11.61□□□□□ -0.55
PAF1-204ENST00000595564 MISP3Q96FF7 219 aa11.61□□□□□ -0.55
PAF1-204ENST00000595564 IGHV3-48P01763 117 aa11.6□□□□□ -0.55
PAF1-204ENST00000595564 PSMB3P49720 205 aa11.6□□□□□ -0.55
PAF1-204ENST00000595564 AWAT1Q58HT5 328 aa11.6□□□□□ -0.55
PAF1-204ENST00000595564 SLC35E3Q7Z769 313 aa11.6□□□□□ -0.55
PAF1-204ENST00000595564 CBLN2Q8IUK8 224 aa11.6□□□□□ -0.55
PAF1-204ENST00000595564 ABHD5Q8WTS1 349 aa11.6□□□□□ -0.55
PAF1-204ENST00000595564 GATAD1Q8WUU5 269 aa11.6□□□□□ -0.55
PAF1-204ENST00000595564 C20orf24Q9BUV8 137 aa11.6□□□□□ -0.55
PAF1-204ENST00000595564 MANBALQ9NQG1 85 aa11.6□□□□□ -0.55
PAF1-204ENST00000595564 PUS1Q9Y606 427 aaKnown RBP eCLIP11.6□□□□□ -0.55
PAF1-204ENST00000595564 GATA2P23769 480 aaPredicted RBP11.6□□□□□ -0.55
PAF1-204ENST00000595564 MFAP2P55001 183 aa11.6□□□□□ -0.55
PAF1-204ENST00000595564 RHOBP62745 196 aa11.6□□□□□ -0.55
PAF1-204ENST00000595564 PVRIGQ6DKI7 326 aa11.6□□□□□ -0.55
PAF1-204ENST00000595564 OR1P1Q8NH06 330 aa11.6□□□□□ -0.55
PAF1-204ENST00000595564 NPIPB3Q92617 1050 aa11.6□□□□□ -0.55
PAF1-204ENST00000595564 MALSU1Q96EH3 234 aa11.6□□□□□ -0.55
PAF1-204ENST00000595564 J3QKU1 62 aa11.59□□□□□ -0.55
PAF1-204ENST00000595564 PLXNB1O43157 2135 aa11.59□□□□□ -0.55
PAF1-204ENST00000595564 STAG3L2P0CL84 134 aa11.59□□□□□ -0.55
PAF1-204ENST00000595564 STAG3L3P0CL85 134 aa11.59□□□□□ -0.55
PAF1-204ENST00000595564 MEF2BQ02080 365 aaPredicted RBP11.59□□□□□ -0.55
PAF1-204ENST00000595564 C5orf64Q2M2E5 130 aa11.59□□□□□ -0.55
PAF1-204ENST00000595564 SPATA31B1PQ5VZV4 182 aa11.59□□□□□ -0.55
PAF1-204ENST00000595564 ETFRF1Q6IPR1 90 aa11.59□□□□□ -0.55
PAF1-204ENST00000595564 SEPSECSQ9HD40 501 aaKnown RBP11.59□□□□□ -0.55
PAF1-204ENST00000595564 RPS10P5Q9NQ39 176 aa11.59□□□□□ -0.55
PAF1-204ENST00000595564 ZMAT5Q9UDW3 170 aaKnown RBP11.59□□□□□ -0.55
PAF1-204ENST00000595564 F11RQ9Y624 299 aaKnown RBP11.59□□□□□ -0.55
PAF1-204ENST00000595564 ASH1LQ9NR48 2969 aaKnown RBP11.58□□□□□ -0.55
PAF1-204ENST00000595564 NCBP2LA6PVI3 153 aaKnown RBP11.58□□□□□ -0.56
PAF1-204ENST00000595564 TMEM11P17152 192 aa11.58□□□□□ -0.56
PAF1-204ENST00000595564 SAA4P35542 130 aa11.58□□□□□ -0.56
PAF1-204ENST00000595564 TAGLN2P37802 199 aaKnown RBP11.58□□□□□ -0.56
PAF1-204ENST00000595564 AKR1C3P42330 323 aa11.58□□□□□ -0.56
PAF1-204ENST00000595564 CD81P60033 236 aa11.58□□□□□ -0.56
PAF1-204ENST00000595564 PAX8Q06710 450 aa11.58□□□□□ -0.56
PAF1-204ENST00000595564 EBI3Q14213 229 aa11.58□□□□□ -0.56
PAF1-204ENST00000595564 FXYD3Q14802 87 aa11.58□□□□□ -0.56
PAF1-204ENST00000595564 TMEM249Q2WGJ8 235 aa11.58□□□□□ -0.56
PAF1-204ENST00000595564 CYP2G1PQ6ZSU1 146 aa11.58□□□□□ -0.56
PAF1-204ENST00000595564 LINC00518Q8N0U6 118 aa11.58□□□□□ -0.56
PAF1-204ENST00000595564 Q8N6K4 173 aa11.58□□□□□ -0.56
PAF1-204ENST00000595564 AJUBAQ96IF1 538 aa11.58□□□□□ -0.56
PAF1-204ENST00000595564 MRPL36Q9P0J6 103 aaKnown RBP11.58□□□□□ -0.56
PAF1-204ENST00000595564 SETXQ7Z333 2677 aaKnown RBP11.58□□□□□ -0.56
PAF1-204ENST00000595564 NAV3Q8IVL0 2385 aa11.58□□□□□ -0.56
PAF1-204ENST00000595564 C7orf77A4D0Y5 90 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms