RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 OR5AN1Q8NGI8 311 aa10.1□□□□□ -0.79
SCAF1-202ENST00000595242 OR9G1Q8NH87 305 aa10.1□□□□□ -0.79
SCAF1-202ENST00000595242 ST6GALNAC6Q969X2 333 aa10.1□□□□□ -0.79
SCAF1-202ENST00000595242 QTRT1Q9BXR0 403 aaKnown RBP10.1□□□□□ -0.79
SCAF1-202ENST00000595242 FOXA2Q9Y261 457 aaPredicted RBP10.1□□□□□ -0.79
SCAF1-202ENST00000595242 SORL1Q92673 2214 aa10.1□□□□□ -0.79
SCAF1-202ENST00000595242 FRAS1Q86XX4 4008 aa10.09□□□□□ -0.79
SCAF1-202ENST00000595242 A0A1W2PPH5 198 aa10.09□□□□□ -0.79
SCAF1-202ENST00000595242 CRYZL1O95825 349 aa10.09□□□□□ -0.79
SCAF1-202ENST00000595242 IGHV1-8P0DP01 117 aa10.09□□□□□ -0.79
SCAF1-202ENST00000595242 SLC38A11Q08AI6 406 aa10.09□□□□□ -0.79
SCAF1-202ENST00000595242 RTL8BQ17RB0 113 aa10.09□□□□□ -0.79
SCAF1-202ENST00000595242 KHDC1LQ5JSQ8 128 aa10.09□□□□□ -0.79
SCAF1-202ENST00000595242 SPANXN5Q5MJ07 72 aa10.09□□□□□ -0.79
SCAF1-202ENST00000595242 C10orf91Q5T1B1 145 aa10.09□□□□□ -0.79
SCAF1-202ENST00000595242 ZFAND6Q6FIF0 208 aa10.09□□□□□ -0.79
SCAF1-202ENST00000595242 TMEM182Q6ZP80 229 aaPredicted RBP10.09□□□□□ -0.79
SCAF1-202ENST00000595242 OR2G3Q8NGZ4 309 aa10.09□□□□□ -0.79
SCAF1-202ENST00000595242 OR4A16Q8NH70 328 aa10.09□□□□□ -0.79
SCAF1-202ENST00000595242 OSR1Q8TAX0 266 aaPredicted RBP10.09□□□□□ -0.79
SCAF1-202ENST00000595242 RCHY1Q96PM5 261 aa10.09□□□□□ -0.79
SCAF1-202ENST00000595242 AIFM2Q9BRQ8 373 aa10.09□□□□□ -0.79
SCAF1-202ENST00000595242 SLC35D1Q9NTN3 355 aa10.09□□□□□ -0.79
SCAF1-202ENST00000595242 TMEM14BQ9NUH8 114 aa10.09□□□□□ -0.79
SCAF1-202ENST00000595242 PITPNC1Q9UKF7 332 aa10.09□□□□□ -0.79
SCAF1-202ENST00000595242 TIMM9Q9Y5J7 89 aa10.09□□□□□ -0.79
SCAF1-202ENST00000595242 C15orf62A8K5M9 175 aa10.08□□□□□ -0.8
SCAF1-202ENST00000595242 CAMLGP49069 296 aa10.08□□□□□ -0.8
SCAF1-202ENST00000595242 LGALS4P56470 323 aa10.08□□□□□ -0.8
SCAF1-202ENST00000595242 TMEM177Q53S58 311 aa10.08□□□□□ -0.8
SCAF1-202ENST00000595242 OR4A47Q6IF82 309 aa10.08□□□□□ -0.8
SCAF1-202ENST00000595242 ADAMTSL5Q6ZMM2 481 aa10.08□□□□□ -0.8
SCAF1-202ENST00000595242 DYNAPQ8N1N2 210 aa10.08□□□□□ -0.8
SCAF1-202ENST00000595242 LFNGQ8NES3 379 aa10.08□□□□□ -0.8
SCAF1-202ENST00000595242 BPIFCQ8NFQ6 507 aa10.08□□□□□ -0.8
SCAF1-202ENST00000595242 PINX1Q96BK5 328 aaKnown RBP10.08□□□□□ -0.8
SCAF1-202ENST00000595242 RHOVQ96L33 236 aa10.08□□□□□ -0.8
SCAF1-202ENST00000595242 TMEM147Q9BVK8 224 aa10.08□□□□□ -0.8
SCAF1-202ENST00000595242 WDR61Q9GZS3 305 aaKnown RBP10.08□□□□□ -0.8
SCAF1-202ENST00000595242 TMEM133Q9H2Q1 129 aa10.08□□□□□ -0.8
SCAF1-202ENST00000595242 HRH4Q9H3N8 390 aa10.08□□□□□ -0.8
SCAF1-202ENST00000595242 BET1LQ9NYM9 111 aa10.08□□□□□ -0.8
SCAF1-202ENST00000595242 ZNF257Q9Y2Q1 563 aa10.08□□□□□ -0.8
SCAF1-202ENST00000595242 A0A1B0GW64 132 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 TMEM218A2RU14 115 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 CEBPZOSA8MTT3 80 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 H0YJW9 148 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 APOA2P02652 100 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 CD5P06127 495 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 IL3RAP26951 378 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 SNCAP37840 140 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 OR2B8PP59922 312 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 SERF2P84101 59 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 RUNX1Q01196 453 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 ETV3LQ6ZN32 361 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 LHFPL4Q7Z7J7 247 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 PDPNQ86YL7 162 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 LILRB2Q8N423 598 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 OR4X2Q8NGF9 303 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 OR13D1Q8NGV5 346 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 PRR25Q96S07 402 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 NABP2Q9BQ15 211 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 SCRT1Q9BWW7 348 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 MRPL20Q9BYC9 149 aaKnown RBP10.07□□□□□ -0.8
SCAF1-202ENST00000595242 PRNDQ9UKY0 176 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 CARHSP1Q9Y2V2 147 aaKnown RBP10.07□□□□□ -0.8
SCAF1-202ENST00000595242 HERC2O95714 4834 aa10.07□□□□□ -0.8
SCAF1-202ENST00000595242 RYR1P21817 5038 aa10.06□□□□□ -0.8
SCAF1-202ENST00000595242 TRAV3A0A0B4J244 114 aa10.06□□□□□ -0.8
SCAF1-202ENST00000595242 PRSS46E5RG02 174 aa10.06□□□□□ -0.8
SCAF1-202ENST00000595242 UPK2O00526 184 aa10.06□□□□□ -0.8
SCAF1-202ENST00000595242 IGLV1-47P01700 117 aa10.06□□□□□ -0.8
SCAF1-202ENST00000595242 ERVFRD-1P60508 538 aa10.06□□□□□ -0.8
SCAF1-202ENST00000595242 HSPE1P61604 102 aaKnown RBP10.06□□□□□ -0.8
SCAF1-202ENST00000595242 RPP30P78346 268 aaKnown RBP10.06□□□□□ -0.8
SCAF1-202ENST00000595242 SSX9Q7RTT3 188 aa10.06□□□□□ -0.8
SCAF1-202ENST00000595242 OR10P1Q8NGE3 313 aa10.06□□□□□ -0.8
SCAF1-202ENST00000595242 SCGB1C1Q8TD33 95 aa10.06□□□□□ -0.8
SCAF1-202ENST00000595242 GGACTQ9BVM4 153 aa10.06□□□□□ -0.8
SCAF1-202ENST00000595242 TRAV1-1A0A0B4J248 108 aa10.05□□□□□ -0.8
SCAF1-202ENST00000595242 RBMXL2O75526 392 aaKnown RBP10.05□□□□□ -0.8
SCAF1-202ENST00000595242 IFNA17P01571 189 aa10.05□□□□□ -0.8
SCAF1-202ENST00000595242 PRH1P02810 166 aa10.05□□□□□ -0.8
SCAF1-202ENST00000595242 COX7A1P24310 79 aa10.05□□□□□ -0.8
SCAF1-202ENST00000595242 ZNF616Q08AN1 781 aa10.05□□□□□ -0.8
SCAF1-202ENST00000595242 HLA-DRB5Q30154 266 aa10.05□□□□□ -0.8
SCAF1-202ENST00000595242 AKR1C8PQ5T2L2 129 aa10.05□□□□□ -0.8
SCAF1-202ENST00000595242 C10orf99Q6UWK7 81 aa10.05□□□□□ -0.8
SCAF1-202ENST00000595242 VKORC1L1Q8N0U8 176 aa10.05□□□□□ -0.8
SCAF1-202ENST00000595242 ABHD12Q8N2K0 398 aa10.05□□□□□ -0.8
SCAF1-202ENST00000595242 OR10X1Q8NGY0 326 aa10.05□□□□□ -0.8
SCAF1-202ENST00000595242 OR4A5Q8NH83 315 aa10.05□□□□□ -0.8
SCAF1-202ENST00000595242 FAM213BQ8TBF2 198 aa10.05□□□□□ -0.8
SCAF1-202ENST00000595242 CLCC1Q96S66 551 aa10.05□□□□□ -0.8
SCAF1-202ENST00000595242 SEC11CQ9BY50 192 aa10.05□□□□□ -0.8
SCAF1-202ENST00000595242 UQCC1Q9NVA1 299 aa10.05□□□□□ -0.8
SCAF1-202ENST00000595242 IGHV2-26A0A0B4J1V2 119 aa10.04□□□□□ -0.8
SCAF1-202ENST00000595242 INS-IGF2F8WCM5 200 aa10.04□□□□□ -0.8
SCAF1-202ENST00000595242 SOX15O60248 233 aa10.04□□□□□ -0.8
SCAF1-202ENST00000595242 IGKV1-16P04430 117 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms