RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 ATP5G2Q06055 141 aa17.45■□□□□ 0.38
SNRNP70-204ENST00000595231 FCN2Q15485 313 aa17.45■□□□□ 0.38
SNRNP70-204ENST00000595231 C8orf86Q6ZUL3 223 aa17.45■□□□□ 0.38
SNRNP70-204ENST00000595231 OR11H7Q8NGC8 314 aa17.45■□□□□ 0.38
SNRNP70-204ENST00000595231 NMES1Q9C002 83 aa17.45■□□□□ 0.38
SNRNP70-204ENST00000595231 K7EIM0 57 aa17.44■□□□□ 0.38
SNRNP70-204ENST00000595231 PAX9P55771 341 aa17.44■□□□□ 0.38
SNRNP70-204ENST00000595231 RUNX1Q01196 453 aa17.44■□□□□ 0.38
SNRNP70-204ENST00000595231 ZNF343Q6P1L6 599 aa17.44■□□□□ 0.38
SNRNP70-204ENST00000595231 CIB3Q96Q77 187 aaPredicted RBP17.44■□□□□ 0.38
SNRNP70-204ENST00000595231 MFSD2BA6NFX1 497 aa17.43■□□□□ 0.38
SNRNP70-204ENST00000595231 SSSCA1O60232 199 aa17.43■□□□□ 0.38
SNRNP70-204ENST00000595231 IFNA10P01566 189 aa17.43■□□□□ 0.38
SNRNP70-204ENST00000595231 LGALS1P09382 135 aaKnown RBP17.43■□□□□ 0.38
SNRNP70-204ENST00000595231 RRAS2P62070 204 aaPredicted RBP17.43■□□□□ 0.38
SNRNP70-204ENST00000595231 MISP3Q96FF7 219 aa17.43■□□□□ 0.38
SNRNP70-204ENST00000595231 S4R3C0 116 aa17.43■□□□□ 0.38
SNRNP70-204ENST00000595231 NUDT19A8MXV4 375 aa17.42■□□□□ 0.38
SNRNP70-204ENST00000595231 I3L2K1 104 aa17.42■□□□□ 0.38
SNRNP70-204ENST00000595231 K7EPK0 472 aa17.42■□□□□ 0.38
SNRNP70-204ENST00000595231 NPY1RP25929 384 aa17.42■□□□□ 0.38
SNRNP70-204ENST00000595231 RAB32Q13637 225 aa17.42■□□□□ 0.38
SNRNP70-204ENST00000595231 DEFB136Q30KP8 78 aa17.42■□□□□ 0.38
SNRNP70-204ENST00000595231 CYCSP99999 105 aaKnown RBP17.42■□□□□ 0.38
SNRNP70-204ENST00000595231 Q6ZNX1 250 aa17.42■□□□□ 0.38
SNRNP70-204ENST00000595231 VN1R17PQ8TDU5 208 aa17.42■□□□□ 0.38
SNRNP70-204ENST00000595231 SCARB1Q8WTV0 552 aa17.42■□□□□ 0.38
SNRNP70-204ENST00000595231 SMIM8Q96KF7 97 aa17.42■□□□□ 0.38
SNRNP70-204ENST00000595231 RAB40CQ96S21 281 aa17.42■□□□□ 0.38
SNRNP70-204ENST00000595231 C11orf1Q9H5F2 150 aa17.42■□□□□ 0.38
SNRNP70-204ENST00000595231 IGHV3-21A0A0B4J1V1 117 aa17.41■□□□□ 0.38
SNRNP70-204ENST00000595231 C15orf62A8K5M9 175 aa17.41■□□□□ 0.38
SNRNP70-204ENST00000595231 LY86O95711 162 aa17.41■□□□□ 0.38
SNRNP70-204ENST00000595231 ATP5IP56385 69 aaPredicted RBP17.41■□□□□ 0.38
SNRNP70-204ENST00000595231 EXOSC2Q13868 293 aaKnown RBP17.41■□□□□ 0.38
SNRNP70-204ENST00000595231 RAX2Q96IS3 184 aa17.41■□□□□ 0.38
SNRNP70-204ENST00000595231 CXorf58Q96LI9 332 aa17.41■□□□□ 0.38
SNRNP70-204ENST00000595231 CCDC140Q96MF4 163 aa17.41■□□□□ 0.38
SNRNP70-204ENST00000595231 LSM5Q9Y4Y9 91 aaKnown RBP17.41■□□□□ 0.38
SNRNP70-204ENST00000595231 MT-CO2P00403 227 aa17.4■□□□□ 0.38
SNRNP70-204ENST00000595231 IGHV3-23P01764 117 aa17.4■□□□□ 0.38
SNRNP70-204ENST00000595231 MLANAQ16655 118 aa17.4■□□□□ 0.38
SNRNP70-204ENST00000595231 ETV3LQ6ZN32 361 aa17.4■□□□□ 0.38
SNRNP70-204ENST00000595231 PINX1Q96BK5 328 aaKnown RBP17.4■□□□□ 0.38
SNRNP70-204ENST00000595231 DUX3Q96PT4 197 aa17.4■□□□□ 0.38
SNRNP70-204ENST00000595231 OR4C12Q96R67 309 aa17.4■□□□□ 0.38
SNRNP70-204ENST00000595231 FNDC4Q9H6D8 234 aaPredicted RBP17.4■□□□□ 0.38
SNRNP70-204ENST00000595231 H3BP45 60 aa17.39■□□□□ 0.37
SNRNP70-204ENST00000595231 CORTO00230 105 aa17.39■□□□□ 0.37
SNRNP70-204ENST00000595231 TRBV12-3P01733 135 aa17.39■□□□□ 0.37
SNRNP70-204ENST00000595231 TAS2R30P59541 319 aa17.39■□□□□ 0.37
SNRNP70-204ENST00000595231 SPANXN5Q5MJ07 72 aa17.39■□□□□ 0.37
SNRNP70-204ENST00000595231 NOXA1Q86UR1 476 aa17.39■□□□□ 0.37
SNRNP70-204ENST00000595231 ZNF502Q8TBZ5 544 aa17.39■□□□□ 0.37
SNRNP70-204ENST00000595231 RNASEH2CQ8TDP1 164 aaKnown RBP17.39■□□□□ 0.37
SNRNP70-204ENST00000595231 EEF1AKMT3Q96AZ1 226 aa17.39■□□□□ 0.37
SNRNP70-204ENST00000595231 PSENENQ9NZ42 101 aa17.39■□□□□ 0.37
SNRNP70-204ENST00000595231 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.39■□□□□ 0.37
SNRNP70-204ENST00000595231 ANKRD34BA5PLL1 514 aa17.39■□□□□ 0.37
SNRNP70-204ENST00000595231 M0QZ24 198 aa17.39■□□□□ 0.37
SNRNP70-204ENST00000595231 TSPAN15O95858 294 aa17.39■□□□□ 0.37
SNRNP70-204ENST00000595231 IGHV3-48P01763 117 aa17.39■□□□□ 0.37
SNRNP70-204ENST00000595231 S100A10P60903 97 aa17.39■□□□□ 0.37
SNRNP70-204ENST00000595231 OR11H1Q8NG94 326 aa17.39■□□□□ 0.37
SNRNP70-204ENST00000595231 PPP1R1CQ8WVI7 109 aa17.39■□□□□ 0.37
SNRNP70-204ENST00000595231 WNK1Q9H4A3 2382 aa17.38■□□□□ 0.37
SNRNP70-204ENST00000595231 TRBV7-1A0A0A6YYK4 115 aa17.38■□□□□ 0.37
SNRNP70-204ENST00000595231 F8W735 103 aaPredicted RBP17.38■□□□□ 0.37
SNRNP70-204ENST00000595231 CCL24O00175 119 aa17.38■□□□□ 0.37
SNRNP70-204ENST00000595231 OR4F17Q8NGA8 305 aa17.38■□□□□ 0.37
SNRNP70-204ENST00000595231 OR4F4Q96R69 305 aa17.38■□□□□ 0.37
SNRNP70-204ENST00000595231 PEF1Q9UBV8 284 aaKnown RBP17.38■□□□□ 0.37
SNRNP70-204ENST00000595231 IGHV4OR15-8A0A075B7B6 117 aa17.37■□□□□ 0.37
SNRNP70-204ENST00000595231 A0A087WW49 117 aa17.37■□□□□ 0.37
SNRNP70-204ENST00000595231 H0YIZ8 118 aa17.37■□□□□ 0.37
SNRNP70-204ENST00000595231 RPP30P78346 268 aaKnown RBP17.37■□□□□ 0.37
SNRNP70-204ENST00000595231 FHL3Q13643 280 aa17.37■□□□□ 0.37
SNRNP70-204ENST00000595231 LRRC37A5PQ49AS3 106 aa17.37■□□□□ 0.37
SNRNP70-204ENST00000595231 OR1N2Q8NGR9 330 aa17.37■□□□□ 0.37
SNRNP70-204ENST00000595231 ZNF436Q9C0F3 470 aaPredicted RBP17.37■□□□□ 0.37
SNRNP70-204ENST00000595231 C21orf62Q9NYP8 219 aa17.37■□□□□ 0.37
SNRNP70-204ENST00000595231 STRAPQ9Y3F4 350 aaKnown RBP17.37■□□□□ 0.37
SNRNP70-204ENST00000595231 TSC22D2O75157 780 aa17.36■□□□□ 0.37
SNRNP70-204ENST00000595231 DEDDO75618 318 aa17.36■□□□□ 0.37
SNRNP70-204ENST00000595231 HSPB1P04792 205 aaKnown RBP17.36■□□□□ 0.37
SNRNP70-204ENST00000595231 IFNA4P05014 189 aa17.36■□□□□ 0.37
SNRNP70-204ENST00000595231 OPRK1P41145 380 aa17.36■□□□□ 0.37
SNRNP70-204ENST00000595231 CLEC19AQ6UXS0 136 aa17.36■□□□□ 0.37
SNRNP70-204ENST00000595231 RANGRFQ9HD47 186 aaPredicted RBP17.36■□□□□ 0.37
SNRNP70-204ENST00000595231 CLEC3BP05452 202 aa17.36■□□□□ 0.37
SNRNP70-204ENST00000595231 RAB11AP62491 216 aa17.36■□□□□ 0.37
SNRNP70-204ENST00000595231 TMEM14EPQ6UXP3 125 aa17.36■□□□□ 0.37
SNRNP70-204ENST00000595231 MRPL36Q9P0J6 103 aaKnown RBP17.36■□□□□ 0.37
SNRNP70-204ENST00000595231 PMS2P5A8MQ11 134 aa17.35■□□□□ 0.37
SNRNP70-204ENST00000595231 PRSS46E5RG02 174 aa17.35■□□□□ 0.37
SNRNP70-204ENST00000595231 L7N2F9 121 aa17.35■□□□□ 0.37
SNRNP70-204ENST00000595231 OR8U8P0C7N1 319 aa17.35■□□□□ 0.37
SNRNP70-204ENST00000595231 FCGR2BP31994 310 aaPredicted RBP17.35■□□□□ 0.37
SNRNP70-204ENST00000595231 MYCNOSP40205 109 aa17.35■□□□□ 0.37
SNRNP70-204ENST00000595231 VAMP2P63027 116 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms