RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 SSMEM1Q8WWF3 244 aa12.04□□□□□ -0.48
VRK3-207ENST00000594092 RASL11BQ9BPW5 248 aa12.04□□□□□ -0.48
VRK3-207ENST00000594092 A6NDX4 124 aa12.03□□□□□ -0.48
VRK3-207ENST00000594092 C17orf112F2Z3M2 114 aa12.03□□□□□ -0.48
VRK3-207ENST00000594092 I3L521 148 aa12.03□□□□□ -0.48
VRK3-207ENST00000594092 CD5LO43866 347 aa12.03□□□□□ -0.48
VRK3-207ENST00000594092 HLA-DRB1P01911 266 aa12.03□□□□□ -0.48
VRK3-207ENST00000594092 MDKP21741 143 aaPredicted RBP12.03□□□□□ -0.48
VRK3-207ENST00000594092 NDPQ00604 133 aa12.03□□□□□ -0.48
VRK3-207ENST00000594092 BTNL8Q6UX41 500 aa12.03□□□□□ -0.48
VRK3-207ENST00000594092 CENPVQ7Z7K6 275 aaPredicted RBP12.03□□□□□ -0.48
VRK3-207ENST00000594092 C5orf56Q8N8D9 126 aa12.03□□□□□ -0.48
VRK3-207ENST00000594092 ZNF709Q8N972 641 aa12.03□□□□□ -0.48
VRK3-207ENST00000594092 P2RX4Q99571 388 aa12.03□□□□□ -0.48
VRK3-207ENST00000594092 SRSF8Q9BRL6 282 aaKnown RBP12.03□□□□□ -0.48
VRK3-207ENST00000594092 NPCDR1Q9BY65 106 aa12.03□□□□□ -0.48
VRK3-207ENST00000594092 WDR83OSQ9Y284 106 aa12.03□□□□□ -0.48
VRK3-207ENST00000594092 MOB4Q9Y3A3 225 aa12.03□□□□□ -0.48
VRK3-207ENST00000594092 ACANP16112 2415 aa12.03□□□□□ -0.48
VRK3-207ENST00000594092 IGHV7-81A0A0B4J1V7 117 aa12.02□□□□□ -0.48
VRK3-207ENST00000594092 RAB19A4D1S5 217 aa12.02□□□□□ -0.48
VRK3-207ENST00000594092 FNDC10F2Z333 226 aa12.02□□□□□ -0.48
VRK3-207ENST00000594092 MPDU1O75352 247 aa12.02□□□□□ -0.48
VRK3-207ENST00000594092 LY6EQ16553 131 aa12.02□□□□□ -0.48
VRK3-207ENST00000594092 LYPD6BQ8NI32 183 aa12.02□□□□□ -0.48
VRK3-207ENST00000594092 FAM103A1Q9BTL3 118 aaKnown RBP12.02□□□□□ -0.48
VRK3-207ENST00000594092 TSPAN15O95858 294 aa12.02□□□□□ -0.49
VRK3-207ENST00000594092 ZNF114Q8NC26 417 aa12.02□□□□□ -0.49
VRK3-207ENST00000594092 ABHD5Q8WTS1 349 aa12.02□□□□□ -0.49
VRK3-207ENST00000594092 ARPC1AQ92747 370 aa12.02□□□□□ -0.49
VRK3-207ENST00000594092 NPVFQ9HCQ7 196 aa12.02□□□□□ -0.49
VRK3-207ENST00000594092 AMY1AP04745 511 aa12.01□□□□□ -0.49
VRK3-207ENST00000594092 TMEM41BQ5BJD5 291 aa12.01□□□□□ -0.49
VRK3-207ENST00000594092 ARSJQ5FYB0 599 aaPredicted RBP12.01□□□□□ -0.49
VRK3-207ENST00000594092 TOR2AQ5JU69 321 aa12.01□□□□□ -0.49
VRK3-207ENST00000594092 UQCC3Q6UW78 93 aa12.01□□□□□ -0.49
VRK3-207ENST00000594092 TREML4Q6UXN2 200 aa12.01□□□□□ -0.49
VRK3-207ENST00000594092 C19orf35Q6ZS72 473 aa12.01□□□□□ -0.49
VRK3-207ENST00000594092 HSPB9Q9BQS6 159 aa12.01□□□□□ -0.49
VRK3-207ENST00000594092 ELLP55199 621 aaPredicted RBP12□□□□□ -0.49
VRK3-207ENST00000594092 AKR1C1Q04828 323 aa12□□□□□ -0.49
VRK3-207ENST00000594092 IL17RELQ6ZVW7 336 aa12□□□□□ -0.49
VRK3-207ENST00000594092 TEX29Q8N6K0 151 aa12□□□□□ -0.49
VRK3-207ENST00000594092 RNASEH2CQ8TDP1 164 aaKnown RBP12□□□□□ -0.49
VRK3-207ENST00000594092 ZNF48Q96MX3 618 aaPredicted RBP12□□□□□ -0.49
VRK3-207ENST00000594092 PITPNC1Q9UKF7 332 aa12□□□□□ -0.49
VRK3-207ENST00000594092 SH2D7A6NKC9 451 aaPredicted RBP12□□□□□ -0.49
VRK3-207ENST00000594092 SOX15O60248 233 aa12□□□□□ -0.49
VRK3-207ENST00000594092 IGHV4-59P01825 116 aa12□□□□□ -0.49
VRK3-207ENST00000594092 MBP02144 154 aa12□□□□□ -0.49
VRK3-207ENST00000594092 H2AFB1P0C5Y9 115 aa12□□□□□ -0.49
VRK3-207ENST00000594092 EGR2P11161 476 aaPredicted RBP12□□□□□ -0.49
VRK3-207ENST00000594092 IER3P46695 156 aa12□□□□□ -0.49
VRK3-207ENST00000594092 MFAP2P55001 183 aa12□□□□□ -0.49
VRK3-207ENST00000594092 PVRIGQ6DKI7 326 aa12□□□□□ -0.49
VRK3-207ENST00000594092 TEPPQ6URK8 271 aa12□□□□□ -0.49
VRK3-207ENST00000594092 COMMD1Q8N668 190 aa12□□□□□ -0.49
VRK3-207ENST00000594092 OR1P1Q8NH06 330 aa12□□□□□ -0.49
VRK3-207ENST00000594092 RPRMQ9NS64 109 aa12□□□□□ -0.49
VRK3-207ENST00000594092 F11RQ9Y624 299 aaKnown RBP12□□□□□ -0.49
VRK3-207ENST00000594092 MXRA5Q9NR99 2828 aa11.99□□□□□ -0.49
VRK3-207ENST00000594092 OTOGQ6ZRI0 2925 aa11.99□□□□□ -0.49
VRK3-207ENST00000594092 CTRB1P17538 263 aa11.99□□□□□ -0.49
VRK3-207ENST00000594092 GPX4P36969 197 aaPredicted RBP11.99□□□□□ -0.49
VRK3-207ENST00000594092 RAB2AP61019 212 aa11.99□□□□□ -0.49
VRK3-207ENST00000594092 CD69Q07108 199 aa11.99□□□□□ -0.49
VRK3-207ENST00000594092 RAB31Q13636 194 aa11.99□□□□□ -0.49
VRK3-207ENST00000594092 FFAR4Q5NUL3 377 aa11.99□□□□□ -0.49
VRK3-207ENST00000594092 ASPHD1Q5U4P2 390 aa11.99□□□□□ -0.49
VRK3-207ENST00000594092 CTRB2Q6GPI1 263 aa11.99□□□□□ -0.49
VRK3-207ENST00000594092 SPNS3Q6ZMD2 512 aa11.99□□□□□ -0.49
VRK3-207ENST00000594092 LFNGQ8NES3 379 aa11.99□□□□□ -0.49
VRK3-207ENST00000594092 CACNG8Q8WXS5 425 aa11.99□□□□□ -0.49
VRK3-207ENST00000594092 VSIRQ9H7M9 311 aa11.99□□□□□ -0.49
VRK3-207ENST00000594092 YAE1D1Q9NRH1 226 aa11.99□□□□□ -0.49
VRK3-207ENST00000594092 KCNIP2Q9NS61 270 aa11.99□□□□□ -0.49
VRK3-207ENST00000594092 AGPAT2O15120 278 aa11.98□□□□□ -0.49
VRK3-207ENST00000594092 HBE1P02100 147 aa11.98□□□□□ -0.49
VRK3-207ENST00000594092 MLANAQ16655 118 aa11.98□□□□□ -0.49
VRK3-207ENST00000594092 ACSM6Q6P461 480 aa11.98□□□□□ -0.49
VRK3-207ENST00000594092 Q6YL49 198 aa11.98□□□□□ -0.49
VRK3-207ENST00000594092 C16orf82Q7Z2V1 217 aa11.98□□□□□ -0.49
VRK3-207ENST00000594092 MGST2Q99735 147 aa11.98□□□□□ -0.49
VRK3-207ENST00000594092 PRDM13Q9H4Q3 707 aa11.98□□□□□ -0.49
VRK3-207ENST00000594092 LSM4Q9Y4Z0 139 aaKnown RBP11.98□□□□□ -0.49
VRK3-207ENST00000594092 SONP18583 2426 aaKnown RBP11.98□□□□□ -0.49
VRK3-207ENST00000594092 FLNBO75369 2602 aaKnown RBP11.98□□□□□ -0.49
VRK3-207ENST00000594092 BTBD17A6NE02 478 aa11.97□□□□□ -0.49
VRK3-207ENST00000594092 KRBOX1C9JBD0 128 aa11.97□□□□□ -0.49
VRK3-207ENST00000594092 OPRK1P41145 380 aa11.97□□□□□ -0.49
VRK3-207ENST00000594092 SLC16A13Q7RTY0 426 aa11.97□□□□□ -0.49
VRK3-207ENST00000594092 OR5R1Q8NH85 324 aa11.97□□□□□ -0.49
VRK3-207ENST00000594092 SLC35E1Q96K37 410 aa11.97□□□□□ -0.49
VRK3-207ENST00000594092 WNT10AQ9GZT5 417 aa11.97□□□□□ -0.49
VRK3-207ENST00000594092 FNDC4Q9H6D8 234 aaPredicted RBP11.97□□□□□ -0.49
VRK3-207ENST00000594092 DMRT1Q9Y5R6 373 aa11.97□□□□□ -0.49
VRK3-207ENST00000594092 A0A1B0GV50 99 aa11.97□□□□□ -0.49
VRK3-207ENST00000594092 LINC01548A6NM66 108 aa11.97□□□□□ -0.49
VRK3-207ENST00000594092 M0QZK8 103 aa11.97□□□□□ -0.49
VRK3-207ENST00000594092 CRYGCP07315 174 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms