RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 BRD3OSQ6XYD6 125 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 CYB561D1Q8N8Q1 229 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 OR52E5Q8NH55 327 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 VSTM2AQ8TAG5 236 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 HIPK2Q9H2X6 1198 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 TPSG1Q9NRR2 321 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 TIMM9Q9Y5J7 89 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 MAP1LC3B2A6NCE7 125 aa10.58□□□□□ -0.72
VRK3-205ENST00000593919 SPCS3P61009 180 aa10.58□□□□□ -0.72
VRK3-205ENST00000593919 VMA21Q3ZAQ7 101 aa10.58□□□□□ -0.72
VRK3-205ENST00000593919 PDLIM3Q53GG5 364 aaPredicted RBP10.58□□□□□ -0.72
VRK3-205ENST00000593919 FBLN7Q53RD9 439 aa10.58□□□□□ -0.72
VRK3-205ENST00000593919 KHDC3LQ587J8 217 aa10.58□□□□□ -0.72
VRK3-205ENST00000593919 TMEM167AQ8TBQ9 72 aa10.58□□□□□ -0.72
VRK3-205ENST00000593919 MBD3L1Q8WWY6 194 aa10.58□□□□□ -0.72
VRK3-205ENST00000593919 MAP1LC3BQ9GZQ8 125 aa10.58□□□□□ -0.72
VRK3-205ENST00000593919 PRNDQ9UKY0 176 aa10.58□□□□□ -0.72
VRK3-205ENST00000593919 TCF19Q9Y242 345 aa10.58□□□□□ -0.72
VRK3-205ENST00000593919 OR51B2Q9Y5P1 312 aa10.58□□□□□ -0.72
VRK3-205ENST00000593919 ACANP16112 2415 aa10.58□□□□□ -0.72
VRK3-205ENST00000593919 COLCA2A8K830 154 aa10.57□□□□□ -0.72
VRK3-205ENST00000593919 IFNA10P01566 189 aa10.57□□□□□ -0.72
VRK3-205ENST00000593919 RPLP1P05386 114 aaKnown RBP10.57□□□□□ -0.72
VRK3-205ENST00000593919 FLI1Q01543 452 aaPredicted RBP10.57□□□□□ -0.72
VRK3-205ENST00000593919 RHEBQ15382 184 aa10.57□□□□□ -0.72
VRK3-205ENST00000593919 OR4A5Q8NH83 315 aa10.57□□□□□ -0.72
VRK3-205ENST00000593919 ISOC2Q96AB3 205 aa10.57□□□□□ -0.72
VRK3-205ENST00000593919 HEYLQ9NQ87 328 aaPredicted RBP10.57□□□□□ -0.72
VRK3-205ENST00000593919 H3BQ15 152 aa10.57□□□□□ -0.72
VRK3-205ENST00000593919 HMGB3O15347 200 aaKnown RBP10.57□□□□□ -0.72
VRK3-205ENST00000593919 MOSP00540 346 aa10.57□□□□□ -0.72
VRK3-205ENST00000593919 OPN1MWP04001 364 aa10.57□□□□□ -0.72
VRK3-205ENST00000593919 CRYBA1P05813 215 aa10.57□□□□□ -0.72
VRK3-205ENST00000593919 OPN1MW2P0DN77 364 aa10.57□□□□□ -0.72
VRK3-205ENST00000593919 OPN1MW3P0DN78 364 aa10.57□□□□□ -0.72
VRK3-205ENST00000593919 HOXA1P49639 335 aaPredicted RBP10.57□□□□□ -0.72
VRK3-205ENST00000593919 HSPE1P61604 102 aaKnown RBP10.57□□□□□ -0.72
VRK3-205ENST00000593919 RPL8P62917 257 aaKnown RBP10.57□□□□□ -0.72
VRK3-205ENST00000593919 HES1Q14469 280 aa10.57□□□□□ -0.72
VRK3-205ENST00000593919 PSG5Q15238 335 aa10.57□□□□□ -0.72
VRK3-205ENST00000593919 FFAR4Q5NUL3 377 aa10.57□□□□□ -0.72
VRK3-205ENST00000593919 C15orf54Q8N8G6 183 aa10.57□□□□□ -0.72
VRK3-205ENST00000593919 RNF5Q99942 180 aa10.57□□□□□ -0.72
VRK3-205ENST00000593919 FOXC2Q99958 501 aa10.57□□□□□ -0.72
VRK3-205ENST00000593919 ZNF430Q9H8G1 570 aaPredicted RBP10.57□□□□□ -0.72
VRK3-205ENST00000593919 SLC25A22Q9H936 323 aa10.57□□□□□ -0.72
VRK3-205ENST00000593919 SLC39A9Q9NUM3 307 aa10.57□□□□□ -0.72
VRK3-205ENST00000593919 ZMAT5Q9UDW3 170 aaKnown RBP10.57□□□□□ -0.72
VRK3-205ENST00000593919 ZNF257Q9Y2Q1 563 aa10.57□□□□□ -0.72
VRK3-205ENST00000593919 SMCO3A2RU48 225 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 ZNF98A6NK75 572 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 BCL2P10415 239 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 MMDQ15546 238 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 MRGPRG-AS1Q2M3A8 158 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 VWC2Q2TAL6 325 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 KLF17Q5JT82 389 aaPredicted RBP10.56□□□□□ -0.72
VRK3-205ENST00000593919 CENPVQ7Z7K6 275 aaPredicted RBP10.56□□□□□ -0.72
VRK3-205ENST00000593919 RPP25LQ8N5L8 163 aaKnown RBP10.56□□□□□ -0.72
VRK3-205ENST00000593919 ZNF709Q8N972 641 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 TEX45Q8NA69 505 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 NPCDR1Q9BY65 106 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 FKBP11Q9NYL4 201 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 J3QLI3 93 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 CRYGBP07316 175 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 VDAC2P45880 294 aaPredicted RBP10.56□□□□□ -0.72
VRK3-205ENST00000593919 RPP30P78346 268 aaKnown RBP10.56□□□□□ -0.72
VRK3-205ENST00000593919 ZFP82Q8N141 532 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 CIARTQ8N365 385 aaPredicted RBP10.56□□□□□ -0.72
VRK3-205ENST00000593919 OR10G4Q8NGN3 311 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 OR10G9Q8NGN4 311 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 OR10G7Q8NGN6 311 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 OR2T10Q8NGZ9 312 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 OR5B3Q8NH48 314 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 HIST1H2BAQ96A08 127 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 HINT2Q9BX68 163 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 COMMD5Q9GZQ3 224 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 METTL1Q9UBP6 276 aaKnown RBP10.56□□□□□ -0.72
VRK3-205ENST00000593919 SIGLEC9Q9Y336 463 aa10.56□□□□□ -0.72
VRK3-205ENST00000593919 SONP18583 2426 aaKnown RBP10.55□□□□□ -0.72
VRK3-205ENST00000593919 TEX50A0A1B0GTY4 177 aa10.55□□□□□ -0.72
VRK3-205ENST00000593919 RRHO14718 337 aa10.55□□□□□ -0.72
VRK3-205ENST00000593919 RAB11AP62491 216 aa10.55□□□□□ -0.72
VRK3-205ENST00000593919 PRCDQ00LT1 54 aa10.55□□□□□ -0.72
VRK3-205ENST00000593919 EBI3Q14213 229 aa10.55□□□□□ -0.72
VRK3-205ENST00000593919 C10orf55Q5SWW7 151 aa10.55□□□□□ -0.72
VRK3-205ENST00000593919 PPP1R27Q86WC6 154 aa10.55□□□□□ -0.72
VRK3-205ENST00000593919 FBXL15Q9H469 300 aa10.55□□□□□ -0.72
VRK3-205ENST00000593919 SAV1Q9H4B6 383 aaPredicted RBP10.55□□□□□ -0.72
VRK3-205ENST00000593919 A0A0U1RQK1 487 aa10.54□□□□□ -0.72
VRK3-205ENST00000593919 E7EUB6 86 aa10.54□□□□□ -0.72
VRK3-205ENST00000593919 C17orf112F2Z3M2 114 aa10.54□□□□□ -0.72
VRK3-205ENST00000593919 NBR2O15453 112 aa10.54□□□□□ -0.72
VRK3-205ENST00000593919 IFNA1P01562 189 aa10.54□□□□□ -0.72
VRK3-205ENST00000593919 PRSS8Q16651 343 aa10.54□□□□□ -0.72
VRK3-205ENST00000593919 NIPSNAP3BQ9BS92 247 aa10.54□□□□□ -0.72
VRK3-205ENST00000593919 FLNBO75369 2602 aaKnown RBP10.54□□□□□ -0.72
VRK3-205ENST00000593919 CTXND1A0A1B0GTU2 59 aa10.54□□□□□ -0.72
VRK3-205ENST00000593919 NDUFA3O95167 84 aa10.54□□□□□ -0.72
VRK3-205ENST00000593919 LY86O95711 162 aa10.54□□□□□ -0.72
VRK3-205ENST00000593919 MBP02144 154 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms