RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 YPEL2Q96QA6 119 aa10.62□□□□□ -0.71
DNMT1-228ENST00000592705 HEATR5BQ9P2D3 2071 aa10.62□□□□□ -0.71
DNMT1-228ENST00000592705 TCRBV4S1A1TA0A5B7 111 aa10.62□□□□□ -0.71
DNMT1-228ENST00000592705 MGAMO43451 1857 aa10.62□□□□□ -0.71
DNMT1-228ENST00000592705 CELA3BP08861 270 aa10.62□□□□□ -0.71
DNMT1-228ENST00000592705 SEMA5BQ9P283 1151 aa10.62□□□□□ -0.71
DNMT1-228ENST00000592705 SPRR3Q9UBC9 169 aa10.62□□□□□ -0.71
DNMT1-228ENST00000592705 NLRC5Q86WI3 1866 aa10.62□□□□□ -0.71
DNMT1-228ENST00000592705 OR4C46A6NHA9 309 aa10.62□□□□□ -0.71
DNMT1-228ENST00000592705 PIP4P1Q86T03 277 aa10.62□□□□□ -0.71
DNMT1-228ENST00000592705 FAM90A9PA6NNJ1 464 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 PMCHL2Q9BQD1 86 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 MAP1LC3AQ9H492 121 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 KIF26BQ2KJY2 2108 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 IMMP2LQ96T52 175 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 PEMTQ9UBM1 199 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 GAGE10A6NGK3 116 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 NPIPB11E5RHQ5 1161 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 PEX7O00628 323 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 RBFOX2O43251 390 aaKnown RBP eCLIP10.61□□□□□ -0.715e-9■■■□□ 15.5
DNMT1-228ENST00000592705 C16orf92Q96LL3 132 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 TBL2Q9Y4P3 447 aaKnown RBP10.61□□□□□ -0.71
DNMT1-228ENST00000592705 MOSP00540 346 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 STAG3L2P0CL84 134 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 MEF2CQ06413 473 aaPredicted RBP10.61□□□□□ -0.71
DNMT1-228ENST00000592705 NSUN5P1Q3KNT7 163 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 GOLT1AQ6ZVE7 132 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 MIR17HGQ75NE6 70 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 RSPO3Q9BXY4 272 aaPredicted RBP10.61□□□□□ -0.71
DNMT1-228ENST00000592705 PTPRDP23468 1912 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 RELQ04864 619 aaPredicted RBP10.61□□□□□ -0.71
DNMT1-228ENST00000592705 TMEM144Q7Z5S9 345 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 GGNQ86UU5 652 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 RNASEH2CQ8TDP1 164 aaKnown RBP10.61□□□□□ -0.71
DNMT1-228ENST00000592705 KCNS1Q96KK3 526 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 SGK494Q96LW2 274 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 TMEM70Q9BUB7 260 aa10.61□□□□□ -0.71
DNMT1-228ENST00000592705 SOX21Q9Y651 276 aaPredicted RBP10.61□□□□□ -0.71
DNMT1-228ENST00000592705 RAMP3O60896 148 aa10.6□□□□□ -0.71
DNMT1-228ENST00000592705 NBEAP1P0C6P0 100 aa10.6□□□□□ -0.71
DNMT1-228ENST00000592705 PSMB2P49721 201 aa10.6□□□□□ -0.71
DNMT1-228ENST00000592705 SMAGPQ0VAQ4 97 aa10.6□□□□□ -0.71
DNMT1-228ENST00000592705 OR10J6PQ8NGY7 276 aa10.6□□□□□ -0.71
DNMT1-228ENST00000592705 NEU1Q99519 415 aa10.6□□□□□ -0.71
DNMT1-228ENST00000592705 AP5S1Q9NUS5 200 aa10.6□□□□□ -0.71
DNMT1-228ENST00000592705 TRBV24-1A0A075B6N3 115 aa10.6□□□□□ -0.71
DNMT1-228ENST00000592705 SNRPD3P62318 126 aaKnown RBP10.6□□□□□ -0.71
DNMT1-228ENST00000592705 CTAG1AP78358 180 aa10.6□□□□□ -0.71
DNMT1-228ENST00000592705 HERPUD1Q15011 391 aa10.6□□□□□ -0.71
DNMT1-228ENST00000592705 BMPERQ8N8U9 685 aa10.6□□□□□ -0.71
DNMT1-228ENST00000592705 DCAF16Q9NXF7 216 aa10.6□□□□□ -0.71
DNMT1-228ENST00000592705 FNDC1Q4ZHG4 1894 aaPredicted RBP10.6□□□□□ -0.71
DNMT1-228ENST00000592705 RAB9AP51151 201 aa10.6□□□□□ -0.71
DNMT1-228ENST00000592705 TRAV40A0A0B4J280 105 aa10.6□□□□□ -0.71
DNMT1-228ENST00000592705 C15orf61A6NNL5 157 aa10.6□□□□□ -0.71
DNMT1-228ENST00000592705 H3BTX0 84 aa10.6□□□□□ -0.71
DNMT1-228ENST00000592705 PEAR1Q5VY43 1037 aaPredicted RBP10.6□□□□□ -0.71
DNMT1-228ENST00000592705 WDR82Q6UXN9 313 aa10.6□□□□□ -0.71
DNMT1-228ENST00000592705 ZNF841Q6ZN19 808 aa10.6□□□□□ -0.71
DNMT1-228ENST00000592705 IZUMO1RA6ND01 250 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 IGHV3-48P01763 117 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 CD55P08174 381 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 NMSQ5H8A3 153 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 TMEM42Q69YG0 159 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 COLCA1Q6ZS62 124 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 TCF24Q7RTU0 167 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 ATOH7Q8N100 152 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 A0A0G2JNJ9 132 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 MORN2Q502X0 79 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 Q9UFV3 132 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 RNF114Q9Y508 228 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 LINC00312Q9Y6C7 94 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 NAPSAO96009 420 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 FABP2P12104 132 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 ANOS1P23352 680 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 FAM216BQ8N7L0 139 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 FMC1Q96HJ9 113 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 VSIRQ9H7M9 311 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 CRIM1Q9NZV1 1036 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 FREM3P0C091 2139 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 PINLYPA6NC86 204 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 TSPOP30536 169 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 UQCRFS1P47985 274 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 PLAURQ03405 335 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 WDR83OSQ9Y284 106 aa10.59□□□□□ -0.71
DNMT1-228ENST00000592705 NDUFS8O00217 210 aa10.58□□□□□ -0.72
DNMT1-228ENST00000592705 UPK2O00526 184 aa10.58□□□□□ -0.72
DNMT1-228ENST00000592705 DLX1P56177 255 aa10.58□□□□□ -0.72
DNMT1-228ENST00000592705 ZNF672Q499Z4 452 aaPredicted RBP10.58□□□□□ -0.72
DNMT1-228ENST00000592705 SAPCD1Q5SSQ6 148 aa10.58□□□□□ -0.72
DNMT1-228ENST00000592705 RNF144BQ7Z419 303 aa10.58□□□□□ -0.72
DNMT1-228ENST00000592705 PARD6GQ9BYG4 376 aaPredicted RBP10.58□□□□□ -0.72
DNMT1-228ENST00000592705 OTX1P32242 354 aaPredicted RBP10.58□□□□□ -0.72
DNMT1-228ENST00000592705 LINC01356Q8N9X3 169 aa10.58□□□□□ -0.72
DNMT1-228ENST00000592705 NDUFAF3Q9BU61 184 aa10.58□□□□□ -0.72
DNMT1-228ENST00000592705 PLSCR4Q9NRQ2 329 aa10.58□□□□□ -0.72
DNMT1-228ENST00000592705 SAA2-SAA4A0A096LPE2 208 aa10.58□□□□□ -0.72
DNMT1-228ENST00000592705 SAA2P0DJI9 122 aaPredicted RBP10.58□□□□□ -0.72
DNMT1-228ENST00000592705 TCTAP57738 103 aa10.58□□□□□ -0.72
DNMT1-228ENST00000592705 RNF223E7ERA6 249 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms