RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 SDHCQ99643 169 aaPredicted RBP10.58□□□□□ -0.72
CLIP3-205ENST00000592017 SLC25A21Q9BQT8 299 aaPredicted RBP10.58□□□□□ -0.72
CLIP3-205ENST00000592017 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.58□□□□□ -0.72
CLIP3-205ENST00000592017 SMAD5-AS1Q9Y6J3 95 aa10.58□□□□□ -0.72
CLIP3-205ENST00000592017 TMEM56-RWDD3S4R434 201 aa10.58□□□□□ -0.72
CLIP3-205ENST00000592017 C2orf70A6NJV1 201 aa10.57□□□□□ -0.72
CLIP3-205ENST00000592017 MT-CO2P00403 227 aa10.57□□□□□ -0.72
CLIP3-205ENST00000592017 IGHV3-48P01763 117 aa10.57□□□□□ -0.72
CLIP3-205ENST00000592017 LCN12Q6JVE5 192 aa10.57□□□□□ -0.72
CLIP3-205ENST00000592017 GPHB5Q86YW7 130 aa10.57□□□□□ -0.72
CLIP3-205ENST00000592017 LGI3Q8N145 548 aa10.57□□□□□ -0.72
CLIP3-205ENST00000592017 CACNG8Q8WXS5 425 aa10.57□□□□□ -0.72
CLIP3-205ENST00000592017 BSCL2Q96G97 398 aaPredicted RBP10.57□□□□□ -0.72
CLIP3-205ENST00000592017 WWC2-AS2Q96NR7 200 aa10.57□□□□□ -0.72
CLIP3-205ENST00000592017 SELENOKQ9Y6D0 94 aa10.57□□□□□ -0.72
CLIP3-205ENST00000592017 U3KQK5 164 aa10.57□□□□□ -0.72
CLIP3-205ENST00000592017 RYR3Q15413 4870 aa10.56□□□□□ -0.72
CLIP3-205ENST00000592017 CEBPZOSA8MTT3 80 aa10.56□□□□□ -0.72
CLIP3-205ENST00000592017 I3L2K1 104 aa10.56□□□□□ -0.72
CLIP3-205ENST00000592017 LGALS9O00182 355 aa10.56□□□□□ -0.72
CLIP3-205ENST00000592017 SULT1A3P0DMM9 295 aa10.56□□□□□ -0.72
CLIP3-205ENST00000592017 SULT1A4P0DMN0 295 aa10.56□□□□□ -0.72
CLIP3-205ENST00000592017 IL7P13232 177 aa10.56□□□□□ -0.72
CLIP3-205ENST00000592017 FOLR2P14207 255 aa10.56□□□□□ -0.72
CLIP3-205ENST00000592017 SPCS3P61009 180 aa10.56□□□□□ -0.72
CLIP3-205ENST00000592017 SRPXP78539 464 aa10.56□□□□□ -0.72
CLIP3-205ENST00000592017 RBMS2Q15434 407 aaKnown RBP10.56□□□□□ -0.72
CLIP3-205ENST00000592017 TMEM128Q5BJH2 165 aa10.56□□□□□ -0.72
CLIP3-205ENST00000592017 UNQ9165/PRO28630Q6UXU0 137 aa10.56□□□□□ -0.72
CLIP3-205ENST00000592017 ADAMTSL5Q6ZMM2 481 aa10.56□□□□□ -0.72
CLIP3-205ENST00000592017 LYZL2Q7Z4W2 148 aa10.56□□□□□ -0.72
CLIP3-205ENST00000592017 CENPSQ8N2Z9 138 aa10.56□□□□□ -0.72
CLIP3-205ENST00000592017 SIGLEC8Q9NYZ4 499 aa10.56□□□□□ -0.72
CLIP3-205ENST00000592017 A0A0B4J2A0 478 aa10.55□□□□□ -0.72
CLIP3-205ENST00000592017 TMEM213A2RRL7 107 aa10.55□□□□□ -0.72
CLIP3-205ENST00000592017 IZUMO1RA6ND01 250 aa10.55□□□□□ -0.72
CLIP3-205ENST00000592017 NAP1L6A6NFF2 107 aa10.55□□□□□ -0.72
CLIP3-205ENST00000592017 CENPXA8MT69 81 aa10.55□□□□□ -0.72
CLIP3-205ENST00000592017 F8W735 103 aaPredicted RBP10.55□□□□□ -0.72
CLIP3-205ENST00000592017 RNASE2P10153 161 aaKnown RBP10.55□□□□□ -0.72
CLIP3-205ENST00000592017 SUB1P53999 127 aaKnown RBP eCLIP10.55□□□□□ -0.72
CLIP3-205ENST00000592017 MFAP4P55083 255 aa10.55□□□□□ -0.72
CLIP3-205ENST00000592017 PPP1R1AQ13522 171 aa10.55□□□□□ -0.72
CLIP3-205ENST00000592017 CD300EQ496F6 205 aaPredicted RBP10.55□□□□□ -0.72
CLIP3-205ENST00000592017 SBSPONQ8IVN8 264 aa10.55□□□□□ -0.72
CLIP3-205ENST00000592017 Q8N1Y9 231 aa10.55□□□□□ -0.72
CLIP3-205ENST00000592017 CHRDL1Q9BU40 450 aa10.55□□□□□ -0.72
CLIP3-205ENST00000592017 PALMDQ9NP74 551 aa10.55□□□□□ -0.72
CLIP3-205ENST00000592017 HEYLQ9NQ87 328 aaPredicted RBP10.55□□□□□ -0.72
CLIP3-205ENST00000592017 SHPKQ9UHJ6 478 aa10.55□□□□□ -0.72
CLIP3-205ENST00000592017 IGHV3OR16-8A0A075B7F1 116 aa10.54□□□□□ -0.72
CLIP3-205ENST00000592017 A8MWP6 167 aa10.54□□□□□ -0.72
CLIP3-205ENST00000592017 INS-IGF2F8WCM5 200 aa10.54□□□□□ -0.72
CLIP3-205ENST00000592017 NUPL2O15504 423 aaKnown RBP10.54□□□□□ -0.72
CLIP3-205ENST00000592017 SMCO1Q147U7 214 aa10.54□□□□□ -0.72
CLIP3-205ENST00000592017 CNPY1Q3B7I2 92 aa10.54□□□□□ -0.72
CLIP3-205ENST00000592017 ANKRD55Q3KP44 614 aa10.54□□□□□ -0.72
CLIP3-205ENST00000592017 TM4SF20Q53R12 229 aa10.54□□□□□ -0.72
CLIP3-205ENST00000592017 NMSQ5H8A3 153 aa10.54□□□□□ -0.72
CLIP3-205ENST00000592017 SPSB3Q6PJ21 355 aa10.54□□□□□ -0.72
CLIP3-205ENST00000592017 OR52E5Q8NH55 327 aa10.54□□□□□ -0.72
CLIP3-205ENST00000592017 C20orf24Q9BUV8 137 aa10.54□□□□□ -0.72
CLIP3-205ENST00000592017 ZNF436Q9C0F3 470 aaPredicted RBP10.54□□□□□ -0.72
CLIP3-205ENST00000592017 FLVCR2Q9UPI3 526 aa10.54□□□□□ -0.72
CLIP3-205ENST00000592017 UFC1Q9Y3C8 167 aa10.54□□□□□ -0.72
CLIP3-205ENST00000592017 CORTO00230 105 aa10.53□□□□□ -0.72
CLIP3-205ENST00000592017 GNG7O60262 68 aa10.53□□□□□ -0.72
CLIP3-205ENST00000592017 NDUFB6O95139 128 aa10.53□□□□□ -0.72
CLIP3-205ENST00000592017 SFT2D2O95562 160 aa10.53□□□□□ -0.72
CLIP3-205ENST00000592017 FRMD6-AS1P0C7T7 363 aa10.53□□□□□ -0.72
CLIP3-205ENST00000592017 CBLN1P23435 193 aa10.53□□□□□ -0.72
CLIP3-205ENST00000592017 OPRK1P41145 380 aa10.53□□□□□ -0.72
CLIP3-205ENST00000592017 AARDQ4LEZ3 155 aa10.53□□□□□ -0.72
CLIP3-205ENST00000592017 BTNL8Q6UX41 500 aa10.53□□□□□ -0.72
CLIP3-205ENST00000592017 GTSCR1Q86UQ5 136 aa10.53□□□□□ -0.72
CLIP3-205ENST00000592017 UXS1Q8NBZ7 420 aa10.53□□□□□ -0.72
CLIP3-205ENST00000592017 OR2K2Q8NGT1 345 aa10.53□□□□□ -0.72
CLIP3-205ENST00000592017 OR1S1Q8NH92 325 aa10.53□□□□□ -0.72
CLIP3-205ENST00000592017 TMEM190Q8WZ59 177 aa10.53□□□□□ -0.72
CLIP3-205ENST00000592017 ATP6V0BQ99437 205 aa10.53□□□□□ -0.72
CLIP3-205ENST00000592017 GAR1Q9NY12 217 aaKnown RBP10.53□□□□□ -0.72
CLIP3-205ENST00000592017 PIGBOS1A0A0B4J2F0 54 aa10.52□□□□□ -0.73
CLIP3-205ENST00000592017 A6NHS1 94 aa10.52□□□□□ -0.73
CLIP3-205ENST00000592017 NDUFA4O00483 81 aa10.52□□□□□ -0.73
CLIP3-205ENST00000592017 ZNF207O43670 478 aaKnown RBP10.52□□□□□ -0.73
CLIP3-205ENST00000592017 YIF1AO95070 293 aa10.52□□□□□ -0.73
CLIP3-205ENST00000592017 BTCP35070 178 aa10.52□□□□□ -0.73
CLIP3-205ENST00000592017 ADMP35318 185 aa10.52□□□□□ -0.73
CLIP3-205ENST00000592017 HTR2BP41595 481 aa10.52□□□□□ -0.73
CLIP3-205ENST00000592017 RELQ04864 619 aaPredicted RBP10.52□□□□□ -0.73
CLIP3-205ENST00000592017 TNFRSF9Q07011 255 aa10.52□□□□□ -0.73
CLIP3-205ENST00000592017 GUCA2BQ16661 112 aa10.52□□□□□ -0.73
CLIP3-205ENST00000592017 DEFB114Q30KQ6 69 aa10.52□□□□□ -0.73
CLIP3-205ENST00000592017 DUSP18Q8NEJ0 188 aa10.52□□□□□ -0.73
CLIP3-205ENST00000592017 SLC24A4Q8NFF2 622 aa10.52□□□□□ -0.73
CLIP3-205ENST00000592017 C7orf50Q9BRJ6 194 aaKnown RBP10.52□□□□□ -0.73
CLIP3-205ENST00000592017 TECRQ9NZ01 308 aaKnown RBP10.52□□□□□ -0.73
CLIP3-205ENST00000592017 MLXQ9UH92 298 aa10.52□□□□□ -0.73
CLIP3-205ENST00000592017 DNAH7Q8WXX0 4024 aa10.51□□□□□ -0.73
CLIP3-205ENST00000592017 DUXBA0A1W2PPF3 345 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms