RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 SCARB1Q8WTV0 552 aa9.09□□□□□ -0.95
LIG3-213ENST00000590630 MISP3Q96FF7 219 aa9.09□□□□□ -0.95
LIG3-213ENST00000590630 BSCL2Q96G97 398 aaPredicted RBP9.09□□□□□ -0.95
LIG3-213ENST00000590630 WDR12Q9GZL7 423 aaKnown RBP9.09□□□□□ -0.95
LIG3-213ENST00000590630 C21orf62Q9NYP8 219 aa9.09□□□□□ -0.95
LIG3-213ENST00000590630 SIGLEC8Q9NYZ4 499 aa9.09□□□□□ -0.95
LIG3-213ENST00000590630 A0A1B0GU03 582 aa9.08□□□□□ -0.96
LIG3-213ENST00000590630 LGALS9O00182 355 aa9.08□□□□□ -0.96
LIG3-213ENST00000590630 CORTO00230 105 aa9.08□□□□□ -0.96
LIG3-213ENST00000590630 OR2C1O95371 312 aa9.08□□□□□ -0.96
LIG3-213ENST00000590630 HLA-AP01891 365 aaKnown RBP9.08□□□□□ -0.96
LIG3-213ENST00000590630 GPR183P32249 361 aa9.08□□□□□ -0.96
LIG3-213ENST00000590630 ANKRD55Q3KP44 614 aa9.08□□□□□ -0.96
LIG3-213ENST00000590630 FAM106AQ4KMX7 169 aa9.08□□□□□ -0.96
LIG3-213ENST00000590630 SPSB3Q6PJ21 355 aa9.08□□□□□ -0.96
LIG3-213ENST00000590630 PLET1Q6UQ28 207 aa9.08□□□□□ -0.96
LIG3-213ENST00000590630 IL34Q6ZMJ4 242 aa9.08□□□□□ -0.96
LIG3-213ENST00000590630 MRAPQ8TCY5 172 aa9.08□□□□□ -0.96
LIG3-213ENST00000590630 GAR1Q9NY12 217 aaKnown RBP9.08□□□□□ -0.96
LIG3-213ENST00000590630 ZNF256Q9Y2P7 627 aaPredicted RBP9.08□□□□□ -0.96
LIG3-213ENST00000590630 WI2-2373I1.2A0A1W2PRP0 233 aa9.07□□□□□ -0.96
LIG3-213ENST00000590630 OR2T8A6NH00 312 aa9.07□□□□□ -0.96
LIG3-213ENST00000590630 I3L2K1 104 aa9.07□□□□□ -0.96
LIG3-213ENST00000590630 TGOLN2O43493 480 aa9.07□□□□□ -0.96
LIG3-213ENST00000590630 IGLV1-51P01701 117 aa9.07□□□□□ -0.96
LIG3-213ENST00000590630 OR4E1P0C645 316 aa9.07□□□□□ -0.96
LIG3-213ENST00000590630 SLC25A6P12236 298 aa9.07□□□□□ -0.96
LIG3-213ENST00000590630 FCGR2BP31994 310 aaPredicted RBP9.07□□□□□ -0.96
LIG3-213ENST00000590630 HTR2BP41595 481 aa9.07□□□□□ -0.96
LIG3-213ENST00000590630 TNFRSF9Q07011 255 aa9.07□□□□□ -0.96
LIG3-213ENST00000590630 DCTN2Q13561 401 aaKnown RBP9.07□□□□□ -0.96
LIG3-213ENST00000590630 ZNF846Q147U1 533 aa9.07□□□□□ -0.96
LIG3-213ENST00000590630 BSXQ3C1V8 233 aa9.07□□□□□ -0.96
LIG3-213ENST00000590630 PVRIGQ6DKI7 326 aa9.07□□□□□ -0.96
LIG3-213ENST00000590630 TXN2Q99757 166 aa9.07□□□□□ -0.96
LIG3-213ENST00000590630 HEYLQ9NQ87 328 aaPredicted RBP9.07□□□□□ -0.96
LIG3-213ENST00000590630 HSPB7Q9UBY9 170 aa9.07□□□□□ -0.96
LIG3-213ENST00000590630 FLVCR2Q9UPI3 526 aa9.07□□□□□ -0.96
LIG3-213ENST00000590630 TMED3Q9Y3Q3 217 aa9.07□□□□□ -0.96
LIG3-213ENST00000590630 COL7A1Q02388 2944 aa9.07□□□□□ -0.96
LIG3-213ENST00000590630 IGHV3-21A0A0B4J1V1 117 aa9.06□□□□□ -0.96
LIG3-213ENST00000590630 C9orf170A2RU37 121 aa9.06□□□□□ -0.96
LIG3-213ENST00000590630 CEBPZOSA8MTT3 80 aa9.06□□□□□ -0.96
LIG3-213ENST00000590630 A8MWP6 167 aa9.06□□□□□ -0.96
LIG3-213ENST00000590630 F8W735 103 aaPredicted RBP9.06□□□□□ -0.96
LIG3-213ENST00000590630 K7EIL1 84 aa9.06□□□□□ -0.96
LIG3-213ENST00000590630 MT-CO2P00403 227 aa9.06□□□□□ -0.96
LIG3-213ENST00000590630 CSN3P07498 182 aa9.06□□□□□ -0.96
LIG3-213ENST00000590630 RNASE2P10153 161 aaKnown RBP9.06□□□□□ -0.96
LIG3-213ENST00000590630 MFAP4P55083 255 aa9.06□□□□□ -0.96
LIG3-213ENST00000590630 DHRS2Q13268 280 aa9.06□□□□□ -0.96
LIG3-213ENST00000590630 C4orf46Q504U0 113 aa9.06□□□□□ -0.96
LIG3-213ENST00000590630 Q56UQ5 140 aa9.06□□□□□ -0.96
LIG3-213ENST00000590630 LYG2Q86SG7 212 aa9.06□□□□□ -0.96
LIG3-213ENST00000590630 UBAC2Q8NBM4 344 aa9.06□□□□□ -0.96
LIG3-213ENST00000590630 OR1S1Q8NH92 325 aa9.06□□□□□ -0.96
LIG3-213ENST00000590630 PINX1Q96BK5 328 aaKnown RBP9.06□□□□□ -0.96
LIG3-213ENST00000590630 C20orf85Q9H1P6 137 aa9.06□□□□□ -0.96
LIG3-213ENST00000590630 HIPK2Q9H2X6 1198 aa9.06□□□□□ -0.96
LIG3-213ENST00000590630 ZC4H2Q9NQZ6 224 aa9.06□□□□□ -0.96
LIG3-213ENST00000590630 ZNF320A2RRD8 509 aa9.05□□□□□ -0.96
LIG3-213ENST00000590630 C2orf70A6NJV1 201 aa9.05□□□□□ -0.96
LIG3-213ENST00000590630 UPK1BO75841 260 aa9.05□□□□□ -0.96
LIG3-213ENST00000590630 LY86O95711 162 aa9.05□□□□□ -0.96
LIG3-213ENST00000590630 TCRBP04435 133 aa9.05□□□□□ -0.96
LIG3-213ENST00000590630 ANXA7P20073 488 aaKnown RBP9.05□□□□□ -0.96
LIG3-213ENST00000590630 ASAH1Q13510 395 aa9.05□□□□□ -0.96
LIG3-213ENST00000590630 MZT2BQ6NZ67 158 aa9.05□□□□□ -0.96
LIG3-213ENST00000590630 NOXA1Q86UR1 476 aa9.05□□□□□ -0.96
LIG3-213ENST00000590630 SLC24A4Q8NFF2 622 aa9.05□□□□□ -0.96
LIG3-213ENST00000590630 COQ8AQ8NI60 647 aa9.05□□□□□ -0.96
LIG3-213ENST00000590630 PRR25Q96S07 402 aa9.05□□□□□ -0.96
LIG3-213ENST00000590630 ZNF436Q9C0F3 470 aaPredicted RBP9.05□□□□□ -0.96
LIG3-213ENST00000590630 PALMDQ9NP74 551 aa9.05□□□□□ -0.96
LIG3-213ENST00000590630 FAM90A26D6RGX4 464 aa9.04□□□□□ -0.96
LIG3-213ENST00000590630 NDUFA4O00483 81 aa9.04□□□□□ -0.96
LIG3-213ENST00000590630 NUPL2O15504 423 aaKnown RBP9.04□□□□□ -0.96
LIG3-213ENST00000590630 PITX3O75364 302 aa9.04□□□□□ -0.96
LIG3-213ENST00000590630 NXPH3O95157 252 aa9.04□□□□□ -0.96
LIG3-213ENST00000590630 CTSGP08311 255 aa9.04□□□□□ -0.96
LIG3-213ENST00000590630 HOXB5P09067 269 aa9.04□□□□□ -0.96
LIG3-213ENST00000590630 FOLR2P14207 255 aa9.04□□□□□ -0.96
LIG3-213ENST00000590630 SPNP16150 400 aa9.04□□□□□ -0.96
LIG3-213ENST00000590630 OPRK1P41145 380 aa9.04□□□□□ -0.96
LIG3-213ENST00000590630 NPBWR1P48145 328 aa9.04□□□□□ -0.96
LIG3-213ENST00000590630 ELLP55199 621 aaPredicted RBP9.04□□□□□ -0.96
LIG3-213ENST00000590630 RELQ04864 619 aaPredicted RBP9.04□□□□□ -0.96
LIG3-213ENST00000590630 C2orf83Q53S99 150 aa9.04□□□□□ -0.96
LIG3-213ENST00000590630 LCN12Q6JVE5 192 aa9.04□□□□□ -0.96
LIG3-213ENST00000590630 DUSP18Q8NEJ0 188 aa9.04□□□□□ -0.96
LIG3-213ENST00000590630 OR2K2Q8NGT1 345 aa9.04□□□□□ -0.96
LIG3-213ENST00000590630 RNASEH2CQ8TDP1 164 aaKnown RBP9.04□□□□□ -0.96
LIG3-213ENST00000590630 DTD1Q8TEA8 209 aa9.04□□□□□ -0.96
LIG3-213ENST00000590630 CHRDL1Q9BU40 450 aa9.04□□□□□ -0.96
LIG3-213ENST00000590630 NUDT15Q9NV35 164 aa9.04□□□□□ -0.96
LIG3-213ENST00000590630 TBC1D24Q9ULP9 559 aa9.04□□□□□ -0.96
LIG3-213ENST00000590630 UFC1Q9Y3C8 167 aa9.04□□□□□ -0.96
LIG3-213ENST00000590630 U3KQ87 197 aa9.04□□□□□ -0.96
LIG3-213ENST00000590630 IGHV3-35A0A0C4DH35 117 aa9.03□□□□□ -0.96
LIG3-213ENST00000590630 FAM240BA0A1B0GVZ2 78 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms