RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 CORTO00230 105 aa9.35□□□□□ -0.91
APOC1-206ENST00000590334 OR2J3O76001 311 aa9.35□□□□□ -0.91
APOC1-206ENST00000590334 NDUFB8O95169 186 aa9.35□□□□□ -0.91
APOC1-206ENST00000590334 IAPPP10997 89 aa9.35□□□□□ -0.91
APOC1-206ENST00000590334 NPY1RP25929 384 aa9.35□□□□□ -0.91
APOC1-206ENST00000590334 RPP30P78346 268 aaKnown RBP9.35□□□□□ -0.91
APOC1-206ENST00000590334 RUNX1Q01196 453 aa9.35□□□□□ -0.91
APOC1-206ENST00000590334 C15orf32Q32M92 178 aa9.35□□□□□ -0.91
APOC1-206ENST00000590334 RNASEH2CQ8TDP1 164 aaKnown RBP9.35□□□□□ -0.91
APOC1-206ENST00000590334 VN1R17PQ8TDU5 208 aa9.35□□□□□ -0.91
APOC1-206ENST00000590334 ZNF436Q9C0F3 470 aaPredicted RBP9.35□□□□□ -0.91
APOC1-206ENST00000590334 C15orf62A8K5M9 175 aa9.34□□□□□ -0.91
APOC1-206ENST00000590334 I3L2K1 104 aa9.34□□□□□ -0.91
APOC1-206ENST00000590334 I3L521 148 aa9.34□□□□□ -0.91
APOC1-206ENST00000590334 K7EIM0 57 aa9.34□□□□□ -0.91
APOC1-206ENST00000590334 TSC22D2O75157 780 aa9.34□□□□□ -0.91
APOC1-206ENST00000590334 DEDDO75618 318 aa9.34□□□□□ -0.91
APOC1-206ENST00000590334 IFNA10P01566 189 aa9.34□□□□□ -0.91
APOC1-206ENST00000590334 GIPP09681 153 aaPredicted RBP9.34□□□□□ -0.91
APOC1-206ENST00000590334 ATP5G2Q06055 141 aa9.34□□□□□ -0.91
APOC1-206ENST00000590334 EXOSC2Q13868 293 aaKnown RBP9.34□□□□□ -0.91
APOC1-206ENST00000590334 ZNF343Q6P1L6 599 aa9.34□□□□□ -0.91
APOC1-206ENST00000590334 SPATA3Q8NHX4 192 aa9.34□□□□□ -0.91
APOC1-206ENST00000590334 CHAC2Q8WUX2 184 aa9.34□□□□□ -0.91
APOC1-206ENST00000590334 PPP1R1CQ8WVI7 109 aa9.34□□□□□ -0.91
APOC1-206ENST00000590334 C4orf3Q8WVX3 66 aa9.34□□□□□ -0.91
APOC1-206ENST00000590334 CXorf58Q96LI9 332 aa9.34□□□□□ -0.91
APOC1-206ENST00000590334 ATP6V0BQ99437 205 aa9.34□□□□□ -0.91
APOC1-206ENST00000590334 GNB4Q9HAV0 340 aa9.34□□□□□ -0.91
APOC1-206ENST00000590334 PSENENQ9NZ42 101 aa9.34□□□□□ -0.91
APOC1-206ENST00000590334 LSM5Q9Y4Y9 91 aaKnown RBP9.34□□□□□ -0.91
APOC1-206ENST00000590334 TRBV7-1A0A0A6YYK4 115 aa9.33□□□□□ -0.92
APOC1-206ENST00000590334 MPC2O95563 127 aa9.33□□□□□ -0.92
APOC1-206ENST00000590334 LGALS1P09382 135 aaKnown RBP9.33□□□□□ -0.92
APOC1-206ENST00000590334 PVALBP20472 110 aaPredicted RBP9.33□□□□□ -0.92
APOC1-206ENST00000590334 S100A10P60903 97 aa9.33□□□□□ -0.92
APOC1-206ENST00000590334 RAP2BP61225 183 aa9.33□□□□□ -0.92
APOC1-206ENST00000590334 DEFA5Q01523 94 aa9.33□□□□□ -0.92
APOC1-206ENST00000590334 FAM209BQ5JX69 171 aa9.33□□□□□ -0.92
APOC1-206ENST00000590334 HIST2H2BDQ6DRA6 164 aa9.33□□□□□ -0.92
APOC1-206ENST00000590334 TMEM14EPQ6UXP3 125 aa9.33□□□□□ -0.92
APOC1-206ENST00000590334 KLHL30-AS1Q8NEE0 82 aa9.33□□□□□ -0.92
APOC1-206ENST00000590334 MISP3Q96FF7 219 aa9.33□□□□□ -0.92
APOC1-206ENST00000590334 OR4C12Q96R67 309 aa9.33□□□□□ -0.92
APOC1-206ENST00000590334 STRAPQ9Y3F4 350 aaKnown RBP9.33□□□□□ -0.92
APOC1-206ENST00000590334 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.32□□□□□ -0.92
APOC1-206ENST00000590334 MFSD2BA6NFX1 497 aa9.32□□□□□ -0.92
APOC1-206ENST00000590334 PMS2P5A8MQ11 134 aa9.32□□□□□ -0.92
APOC1-206ENST00000590334 PRSS46E5RG02 174 aa9.32□□□□□ -0.92
APOC1-206ENST00000590334 H0YIZ8 118 aa9.32□□□□□ -0.92
APOC1-206ENST00000590334 L7N2F9 121 aa9.32□□□□□ -0.92
APOC1-206ENST00000590334 MT-CO2P00403 227 aa9.32□□□□□ -0.92
APOC1-206ENST00000590334 RLN2P04090 185 aa9.32□□□□□ -0.92
APOC1-206ENST00000590334 PET100P0DJ07 73 aa9.32□□□□□ -0.92
APOC1-206ENST00000590334 LYL1P12980 280 aa9.32□□□□□ -0.92
APOC1-206ENST00000590334 FCGR2BP31994 310 aaPredicted RBP9.32□□□□□ -0.92
APOC1-206ENST00000590334 RAB11AP62491 216 aa9.32□□□□□ -0.92
APOC1-206ENST00000590334 VAMP2P63027 116 aa9.32□□□□□ -0.92
APOC1-206ENST00000590334 KHDC1LQ5JSQ8 128 aa9.32□□□□□ -0.92
APOC1-206ENST00000590334 SPANXN5Q5MJ07 72 aa9.32□□□□□ -0.92
APOC1-206ENST00000590334 C18orf65Q6ZTR6 163 aa9.32□□□□□ -0.92
APOC1-206ENST00000590334 ZNF502Q8TBZ5 544 aa9.32□□□□□ -0.92
APOC1-206ENST00000590334 SCARB1Q8WTV0 552 aa9.32□□□□□ -0.92
APOC1-206ENST00000590334 EEF1AKMT3Q96AZ1 226 aa9.32□□□□□ -0.92
APOC1-206ENST00000590334 CCDC140Q96MF4 163 aa9.32□□□□□ -0.92
APOC1-206ENST00000590334 RNF126Q9BV68 326 aa9.32□□□□□ -0.92
APOC1-206ENST00000590334 FNDC4Q9H6D8 234 aaPredicted RBP9.32□□□□□ -0.92
APOC1-206ENST00000590334 OR5AC2Q9NZP5 309 aa9.32□□□□□ -0.92
APOC1-206ENST00000590334 E5RGE8 158 aa9.31□□□□□ -0.92
APOC1-206ENST00000590334 F8W735 103 aaPredicted RBP9.31□□□□□ -0.92
APOC1-206ENST00000590334 H3BP45 60 aa9.31□□□□□ -0.92
APOC1-206ENST00000590334 IGHV3-11P01762 117 aa9.31□□□□□ -0.92
APOC1-206ENST00000590334 OR8U8P0C7N1 319 aa9.31□□□□□ -0.92
APOC1-206ENST00000590334 GPX4P36969 197 aaPredicted RBP9.31□□□□□ -0.92
APOC1-206ENST00000590334 FGL1Q08830 312 aa9.31□□□□□ -0.92
APOC1-206ENST00000590334 NSUN5P1Q3KNT7 163 aa9.31□□□□□ -0.92
APOC1-206ENST00000590334 LRRC37A5PQ49AS3 106 aa9.31□□□□□ -0.92
APOC1-206ENST00000590334 PRSS54Q6PEW0 395 aa9.31□□□□□ -0.92
APOC1-206ENST00000590334 CACNG8Q8WXS5 425 aa9.31□□□□□ -0.92
APOC1-206ENST00000590334 TXN2Q99757 166 aa9.31□□□□□ -0.92
APOC1-206ENST00000590334 LYRM2Q9NU23 88 aaPredicted RBP9.31□□□□□ -0.92
APOC1-206ENST00000590334 PKD1L1Q8TDX9 2849 aa9.31□□□□□ -0.92
APOC1-206ENST00000590334 TRAV14DV4A0A0A6YYC5 116 aa9.3□□□□□ -0.92
APOC1-206ENST00000590334 RPS10-NUDT3A0A1W2PQS6 291 aa9.3□□□□□ -0.92
APOC1-206ENST00000590334 A0A1W2PRX2 142 aa9.3□□□□□ -0.92
APOC1-206ENST00000590334 NUDT19A8MXV4 375 aa9.3□□□□□ -0.92
APOC1-206ENST00000590334 SCAF4O95104 1147 aaKnown RBP9.3□□□□□ -0.92
APOC1-206ENST00000590334 HSPB1P04792 205 aaKnown RBP9.3□□□□□ -0.92
APOC1-206ENST00000590334 IFNA4P05014 189 aa9.3□□□□□ -0.92
APOC1-206ENST00000590334 SLC25A4P12235 298 aa9.3□□□□□ -0.92
APOC1-206ENST00000590334 OPRK1P41145 380 aa9.3□□□□□ -0.92
APOC1-206ENST00000590334 P2RY1P47900 373 aa9.3□□□□□ -0.92
APOC1-206ENST00000590334 MFAP4P55083 255 aa9.3□□□□□ -0.92
APOC1-206ENST00000590334 CD69Q07108 199 aa9.3□□□□□ -0.92
APOC1-206ENST00000590334 FHL3Q13643 280 aa9.3□□□□□ -0.92
APOC1-206ENST00000590334 ETFRF1Q6IPR1 90 aa9.3□□□□□ -0.92
APOC1-206ENST00000590334 ETV3LQ6ZN32 361 aa9.3□□□□□ -0.92
APOC1-206ENST00000590334 C8orf86Q6ZUL3 223 aa9.3□□□□□ -0.92
APOC1-206ENST00000590334 TMEM116Q8NCL8 245 aa9.3□□□□□ -0.92
APOC1-206ENST00000590334 PINX1Q96BK5 328 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms