RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 SULT1A3P0DMM9 295 aa10.67□□□□□ -0.7
SCAMP4-212ENST00000590266 SULT1A4P0DMN0 295 aa10.67□□□□□ -0.7
SCAMP4-212ENST00000590266 IL7P13232 177 aa10.67□□□□□ -0.7
SCAMP4-212ENST00000590266 RBMS2Q15434 407 aaKnown RBP10.67□□□□□ -0.7
SCAMP4-212ENST00000590266 TMEM128Q5BJH2 165 aa10.67□□□□□ -0.7
SCAMP4-212ENST00000590266 GPHB5Q86YW7 130 aa10.67□□□□□ -0.7
SCAMP4-212ENST00000590266 LGI3Q8N145 548 aa10.67□□□□□ -0.7
SCAMP4-212ENST00000590266 CENPSQ8N2Z9 138 aa10.67□□□□□ -0.7
SCAMP4-212ENST00000590266 IL22RA2Q969J5 263 aa10.67□□□□□ -0.7
SCAMP4-212ENST00000590266 BSCL2Q96G97 398 aaPredicted RBP10.67□□□□□ -0.7
SCAMP4-212ENST00000590266 HEYLQ9NQ87 328 aaPredicted RBP10.67□□□□□ -0.7
SCAMP4-212ENST00000590266 IGHV3OR16-8A0A075B7F1 116 aa10.66□□□□□ -0.7
SCAMP4-212ENST00000590266 NAP1L6A6NFF2 107 aa10.66□□□□□ -0.7
SCAMP4-212ENST00000590266 CENPXA8MT69 81 aa10.66□□□□□ -0.7
SCAMP4-212ENST00000590266 LGALS9O00182 355 aa10.66□□□□□ -0.7
SCAMP4-212ENST00000590266 FOLR2P14207 255 aa10.66□□□□□ -0.7
SCAMP4-212ENST00000590266 SUB1P53999 127 aaKnown RBP eCLIP10.66□□□□□ -0.7
SCAMP4-212ENST00000590266 SPCS3P61009 180 aa10.66□□□□□ -0.7
SCAMP4-212ENST00000590266 SRPXP78539 464 aa10.66□□□□□ -0.7
SCAMP4-212ENST00000590266 ZNF846Q147U1 533 aa10.66□□□□□ -0.7
SCAMP4-212ENST00000590266 TM4SF20Q53R12 229 aa10.66□□□□□ -0.7
SCAMP4-212ENST00000590266 LCN12Q6JVE5 192 aa10.66□□□□□ -0.7
SCAMP4-212ENST00000590266 UNQ9165/PRO28630Q6UXU0 137 aa10.66□□□□□ -0.7
SCAMP4-212ENST00000590266 ADAMTSL5Q6ZMM2 481 aa10.66□□□□□ -0.7
SCAMP4-212ENST00000590266 ZNF114Q8NC26 417 aa10.66□□□□□ -0.7
SCAMP4-212ENST00000590266 CHRDL1Q9BU40 450 aa10.66□□□□□ -0.7
SCAMP4-212ENST00000590266 WDR12Q9GZL7 423 aaKnown RBP10.66□□□□□ -0.7
SCAMP4-212ENST00000590266 LSM4Q9Y4Z0 139 aaKnown RBP10.66□□□□□ -0.7
SCAMP4-212ENST00000590266 SMAD5-AS1Q9Y6J3 95 aa10.66□□□□□ -0.7
SCAMP4-212ENST00000590266 TNCP24821 2201 aa10.66□□□□□ -0.7
SCAMP4-212ENST00000590266 A0A0B4J2A0 478 aa10.65□□□□□ -0.7
SCAMP4-212ENST00000590266 IZUMO1RA6ND01 250 aa10.65□□□□□ -0.7
SCAMP4-212ENST00000590266 I3L2K1 104 aa10.65□□□□□ -0.7
SCAMP4-212ENST00000590266 RNASE2P10153 161 aaKnown RBP10.65□□□□□ -0.7
SCAMP4-212ENST00000590266 MFAP4P55083 255 aa10.65□□□□□ -0.7
SCAMP4-212ENST00000590266 PPP1R1AQ13522 171 aa10.65□□□□□ -0.7
SCAMP4-212ENST00000590266 ANKRD55Q3KP44 614 aa10.65□□□□□ -0.7
SCAMP4-212ENST00000590266 CD300EQ496F6 205 aaPredicted RBP10.65□□□□□ -0.7
SCAMP4-212ENST00000590266 C11orf87Q6NUJ2 197 aa10.65□□□□□ -0.7
SCAMP4-212ENST00000590266 C20orf24Q9BUV8 137 aa10.65□□□□□ -0.7
SCAMP4-212ENST00000590266 SIGLEC8Q9NYZ4 499 aa10.65□□□□□ -0.7
SCAMP4-212ENST00000590266 SHPKQ9UHJ6 478 aa10.65□□□□□ -0.7
SCAMP4-212ENST00000590266 FLVCR2Q9UPI3 526 aa10.65□□□□□ -0.7
SCAMP4-212ENST00000590266 DNAH3Q8TD57 4116 aa10.65□□□□□ -0.71
SCAMP4-212ENST00000590266 TMEM213A2RRL7 107 aa10.64□□□□□ -0.71
SCAMP4-212ENST00000590266 F8W735 103 aaPredicted RBP10.64□□□□□ -0.71
SCAMP4-212ENST00000590266 NUPL2O15504 423 aaKnown RBP10.64□□□□□ -0.71
SCAMP4-212ENST00000590266 ZNF207O43670 478 aaKnown RBP10.64□□□□□ -0.71
SCAMP4-212ENST00000590266 GNG7O60262 68 aa10.64□□□□□ -0.71
SCAMP4-212ENST00000590266 YIF1AO95070 293 aa10.64□□□□□ -0.71
SCAMP4-212ENST00000590266 NDUFB6O95139 128 aa10.64□□□□□ -0.71
SCAMP4-212ENST00000590266 CBLN1P23435 193 aa10.64□□□□□ -0.71
SCAMP4-212ENST00000590266 OPRK1P41145 380 aa10.64□□□□□ -0.71
SCAMP4-212ENST00000590266 SMCO1Q147U7 214 aa10.64□□□□□ -0.71
SCAMP4-212ENST00000590266 GUCA2BQ16661 112 aa10.64□□□□□ -0.71
SCAMP4-212ENST00000590266 SPSB3Q6PJ21 355 aa10.64□□□□□ -0.71
SCAMP4-212ENST00000590266 UXS1Q8NBZ7 420 aa10.64□□□□□ -0.71
SCAMP4-212ENST00000590266 OR52E5Q8NH55 327 aa10.64□□□□□ -0.71
SCAMP4-212ENST00000590266 OR1S1Q8NH92 325 aa10.64□□□□□ -0.71
SCAMP4-212ENST00000590266 ASCL2Q99929 193 aa10.64□□□□□ -0.71
SCAMP4-212ENST00000590266 B9D2Q9BPU9 175 aa10.64□□□□□ -0.71
SCAMP4-212ENST00000590266 PALMDQ9NP74 551 aa10.64□□□□□ -0.71
SCAMP4-212ENST00000590266 UFC1Q9Y3C8 167 aa10.64□□□□□ -0.71
SCAMP4-212ENST00000590266 A8MWP6 167 aa10.63□□□□□ -0.71
SCAMP4-212ENST00000590266 INS-IGF2F8WCM5 200 aa10.63□□□□□ -0.71
SCAMP4-212ENST00000590266 SFT2D2O95562 160 aa10.63□□□□□ -0.71
SCAMP4-212ENST00000590266 ADMP35318 185 aa10.63□□□□□ -0.71
SCAMP4-212ENST00000590266 NMSQ5H8A3 153 aa10.63□□□□□ -0.71
SCAMP4-212ENST00000590266 BTNL8Q6UX41 500 aa10.63□□□□□ -0.71
SCAMP4-212ENST00000590266 GTSCR1Q86UQ5 136 aa10.63□□□□□ -0.71
SCAMP4-212ENST00000590266 ZNF436Q9C0F3 470 aaPredicted RBP10.63□□□□□ -0.71
SCAMP4-212ENST00000590266 HIPK2Q9H2X6 1198 aa10.63□□□□□ -0.71
SCAMP4-212ENST00000590266 GAR1Q9NY12 217 aaKnown RBP10.63□□□□□ -0.71
SCAMP4-212ENST00000590266 CTSGP08311 255 aa10.62□□□□□ -0.71
SCAMP4-212ENST00000590266 HOXB5P09067 269 aa10.62□□□□□ -0.71
SCAMP4-212ENST00000590266 ANXA7P20073 488 aaKnown RBP10.62□□□□□ -0.71
SCAMP4-212ENST00000590266 BTCP35070 178 aa10.62□□□□□ -0.71
SCAMP4-212ENST00000590266 HTR2BP41595 481 aa10.62□□□□□ -0.71
SCAMP4-212ENST00000590266 RELQ04864 619 aaPredicted RBP10.62□□□□□ -0.71
SCAMP4-212ENST00000590266 TNFRSF9Q07011 255 aa10.62□□□□□ -0.71
SCAMP4-212ENST00000590266 DEFB114Q30KQ6 69 aa10.62□□□□□ -0.71
SCAMP4-212ENST00000590266 AARDQ4LEZ3 155 aa10.62□□□□□ -0.71
SCAMP4-212ENST00000590266 DUSP18Q8NEJ0 188 aa10.62□□□□□ -0.71
SCAMP4-212ENST00000590266 OR2K2Q8NGT1 345 aa10.62□□□□□ -0.71
SCAMP4-212ENST00000590266 TMEM190Q8WZ59 177 aa10.62□□□□□ -0.71
SCAMP4-212ENST00000590266 WDR89Q96FK6 387 aaPredicted RBP10.62□□□□□ -0.71
SCAMP4-212ENST00000590266 C7orf50Q9BRJ6 194 aaKnown RBP10.62□□□□□ -0.71
SCAMP4-212ENST00000590266 CCDC32Q9BV29 185 aa10.62□□□□□ -0.71
SCAMP4-212ENST00000590266 RBKSQ9H477 322 aa10.62□□□□□ -0.71
SCAMP4-212ENST00000590266 MLXQ9UH92 298 aa10.62□□□□□ -0.71
SCAMP4-212ENST00000590266 PIGBOS1A0A0B4J2F0 54 aa10.61□□□□□ -0.71
SCAMP4-212ENST00000590266 A0A1B0GU03 582 aa10.61□□□□□ -0.71
SCAMP4-212ENST00000590266 CORTO00230 105 aa10.61□□□□□ -0.71
SCAMP4-212ENST00000590266 NDUFA4O00483 81 aa10.61□□□□□ -0.71
SCAMP4-212ENST00000590266 LYRM1O43325 122 aa10.61□□□□□ -0.71
SCAMP4-212ENST00000590266 SCAF4O95104 1147 aaKnown RBP10.61□□□□□ -0.71
SCAMP4-212ENST00000590266 IFNA10P01566 189 aa10.61□□□□□ -0.71
SCAMP4-212ENST00000590266 NPBWR1P48145 328 aa10.61□□□□□ -0.71
SCAMP4-212ENST00000590266 MLANAQ16655 118 aa10.61□□□□□ -0.71
SCAMP4-212ENST00000590266 C4orf46Q504U0 113 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms