RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 AKR1C4P17516 323 aa7.44□□□□□ -1.22
PTPN2-208ENST00000589216 HOXA1P49639 335 aaPredicted RBP7.44□□□□□ -1.22
PTPN2-208ENST00000589216 TATDN3Q17R31 274 aa7.44□□□□□ -1.22
PTPN2-208ENST00000589216 DEFB114Q30KQ6 69 aa7.44□□□□□ -1.22
PTPN2-208ENST00000589216 SPANXN2Q5MJ10 180 aa7.44□□□□□ -1.22
PTPN2-208ENST00000589216 LCN12Q6JVE5 192 aa7.44□□□□□ -1.22
PTPN2-208ENST00000589216 PLET1Q6UQ28 207 aa7.44□□□□□ -1.22
PTPN2-208ENST00000589216 BTNL8Q6UX41 500 aa7.44□□□□□ -1.22
PTPN2-208ENST00000589216 TMED4Q7Z7H5 227 aa7.44□□□□□ -1.22
PTPN2-208ENST00000589216 SBSPONQ8IVN8 264 aa7.44□□□□□ -1.22
PTPN2-208ENST00000589216 TMEM61Q8N0U2 210 aa7.44□□□□□ -1.22
PTPN2-208ENST00000589216 DYNLRB2Q8TF09 96 aa7.44□□□□□ -1.22
PTPN2-208ENST00000589216 PINX1Q96BK5 328 aaKnown RBP7.44□□□□□ -1.22
PTPN2-208ENST00000589216 RRNAD1Q96FB5 475 aaKnown RBP7.44□□□□□ -1.22
PTPN2-208ENST00000589216 GALNT14Q96FL9 552 aa7.44□□□□□ -1.22
PTPN2-208ENST00000589216 BSCL2Q96G97 398 aaPredicted RBP7.44□□□□□ -1.22
PTPN2-208ENST00000589216 MRPL36Q9P0J6 103 aaKnown RBP7.44□□□□□ -1.22
PTPN2-208ENST00000589216 TMEM56-RWDD3S4R434 201 aa7.44□□□□□ -1.22
PTPN2-208ENST00000589216 HUWE1Q7Z6Z7 4374 aaKnown RBP7.43□□□□□ -1.22
PTPN2-208ENST00000589216 ZNF785A8K8V0 405 aa7.43□□□□□ -1.22
PTPN2-208ENST00000589216 INS-IGF2F8WCM5 200 aa7.43□□□□□ -1.22
PTPN2-208ENST00000589216 CYB5BO43169 146 aa7.43□□□□□ -1.22
PTPN2-208ENST00000589216 ZNF207O43670 478 aaKnown RBP7.43□□□□□ -1.22
PTPN2-208ENST00000589216 B3GALNT1O75752 331 aa7.43□□□□□ -1.22
PTPN2-208ENST00000589216 IFNA17P01571 189 aa7.43□□□□□ -1.22
PTPN2-208ENST00000589216 CTSGP08311 255 aa7.43□□□□□ -1.22
PTPN2-208ENST00000589216 CD7P09564 240 aa7.43□□□□□ -1.22
PTPN2-208ENST00000589216 CBLN1P23435 193 aa7.43□□□□□ -1.22
PTPN2-208ENST00000589216 FAUP35544 74 aaKnown RBP7.43□□□□□ -1.22
PTPN2-208ENST00000589216 CCR6P51684 374 aa7.43□□□□□ -1.22
PTPN2-208ENST00000589216 AP3S2P59780 193 aa7.43□□□□□ -1.22
PTPN2-208ENST00000589216 DHODHQ02127 395 aa7.43□□□□□ -1.22
PTPN2-208ENST00000589216 BSXQ3C1V8 233 aa7.43□□□□□ -1.22
PTPN2-208ENST00000589216 Q56UQ5 140 aa7.43□□□□□ -1.22
PTPN2-208ENST00000589216 NMSQ5H8A3 153 aa7.43□□□□□ -1.22
PTPN2-208ENST00000589216 PVRIGQ6DKI7 326 aa7.43□□□□□ -1.22
PTPN2-208ENST00000589216 LYZL2Q7Z4W2 148 aa7.43□□□□□ -1.22
PTPN2-208ENST00000589216 SGPP2Q8IWX5 399 aa7.43□□□□□ -1.22
PTPN2-208ENST00000589216 UXS1Q8NBZ7 420 aa7.43□□□□□ -1.22
PTPN2-208ENST00000589216 TMEM170AQ8WVE7 144 aa7.43□□□□□ -1.22
PTPN2-208ENST00000589216 FNDC4Q9H6D8 234 aaPredicted RBP7.43□□□□□ -1.22
PTPN2-208ENST00000589216 ATG12O94817 140 aa7.42□□□□□ -1.22
PTPN2-208ENST00000589216 BTCP35070 178 aa7.42□□□□□ -1.22
PTPN2-208ENST00000589216 ANKRD55Q3KP44 614 aa7.42□□□□□ -1.22
PTPN2-208ENST00000589216 FAM106AQ4KMX7 169 aa7.42□□□□□ -1.22
PTPN2-208ENST00000589216 ZNF57Q68EA5 555 aaPredicted RBP7.42□□□□□ -1.22
PTPN2-208ENST00000589216 FAM219AQ8IW50 185 aa7.42□□□□□ -1.22
PTPN2-208ENST00000589216 OR1L6Q8NGR2 347 aa7.42□□□□□ -1.22
PTPN2-208ENST00000589216 OR2K2Q8NGT1 345 aa7.42□□□□□ -1.22
PTPN2-208ENST00000589216 IL22RA2Q969J5 263 aa7.42□□□□□ -1.22
PTPN2-208ENST00000589216 PDCD10Q9BUL8 212 aa7.42□□□□□ -1.22
PTPN2-208ENST00000589216 C19orf73Q9NVV2 129 aa7.42□□□□□ -1.22
PTPN2-208ENST00000589216 IGHV3-49A0A0A0MS15 119 aa7.41□□□□□ -1.22
PTPN2-208ENST00000589216 A0A0B4J2A0 478 aa7.41□□□□□ -1.22
PTPN2-208ENST00000589216 LINC00854A0A1B0GVQ3 168 aa7.41□□□□□ -1.22
PTPN2-208ENST00000589216 SCAF4O95104 1147 aaKnown RBP7.41□□□□□ -1.22
PTPN2-208ENST00000589216 C8orf88P0DMB2 117 aa7.41□□□□□ -1.22
PTPN2-208ENST00000589216 IL7P13232 177 aa7.41□□□□□ -1.22
PTPN2-208ENST00000589216 VAMP1P23763 118 aa7.41□□□□□ -1.22
PTPN2-208ENST00000589216 CD81P60033 236 aa7.41□□□□□ -1.22
PTPN2-208ENST00000589216 SPCS3P61009 180 aa7.41□□□□□ -1.22
PTPN2-208ENST00000589216 ERHP84090 104 aaKnown RBP7.41□□□□□ -1.22
PTPN2-208ENST00000589216 PPP1R1AQ13522 171 aa7.41□□□□□ -1.22
PTPN2-208ENST00000589216 MLANAQ16655 118 aa7.41□□□□□ -1.22
PTPN2-208ENST00000589216 GUCA2BQ16661 112 aa7.41□□□□□ -1.22
PTPN2-208ENST00000589216 TRIQKQ629K1 86 aa7.41□□□□□ -1.22
PTPN2-208ENST00000589216 SPSB3Q6PJ21 355 aa7.41□□□□□ -1.22
PTPN2-208ENST00000589216 C20orf24Q9BUV8 137 aa7.41□□□□□ -1.22
PTPN2-208ENST00000589216 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.41□□□□□ -1.22
PTPN2-208ENST00000589216 SHPKQ9UHJ6 478 aa7.41□□□□□ -1.22
PTPN2-208ENST00000589216 NDUFA4O00483 81 aa7.4□□□□□ -1.22
PTPN2-208ENST00000589216 SULT1A3P0DMM9 295 aa7.4□□□□□ -1.22
PTPN2-208ENST00000589216 SULT1A4P0DMN0 295 aa7.4□□□□□ -1.22
PTPN2-208ENST00000589216 FCGR2BP31994 310 aaPredicted RBP7.4□□□□□ -1.22
PTPN2-208ENST00000589216 SNCAP37840 140 aa7.4□□□□□ -1.22
PTPN2-208ENST00000589216 MFAP4P55083 255 aa7.4□□□□□ -1.22
PTPN2-208ENST00000589216 GTSCR1Q86UQ5 136 aa7.4□□□□□ -1.22
PTPN2-208ENST00000589216 DEFB125Q8N687 156 aa7.4□□□□□ -1.22
PTPN2-208ENST00000589216 OR52E5Q8NH55 327 aa7.4□□□□□ -1.22
PTPN2-208ENST00000589216 SCGB3A2Q96PL1 93 aa7.4□□□□□ -1.22
PTPN2-208ENST00000589216 ATP6V0BQ99437 205 aa7.4□□□□□ -1.22
PTPN2-208ENST00000589216 NEURL2Q9BR09 285 aa7.4□□□□□ -1.22
PTPN2-208ENST00000589216 DAZ1Q9NQZ3 744 aaKnown RBP7.4□□□□□ -1.22
PTPN2-208ENST00000589216 TECRQ9NZ01 308 aaKnown RBP7.4□□□□□ -1.22
PTPN2-208ENST00000589216 FLVCR2Q9UPI3 526 aa7.4□□□□□ -1.22
PTPN2-208ENST00000589216 UFC1Q9Y3C8 167 aa7.4□□□□□ -1.22
PTPN2-208ENST00000589216 U3KQK5 164 aa7.4□□□□□ -1.22
PTPN2-208ENST00000589216 DNAH7Q8WXX0 4024 aa7.4□□□□□ -1.22
PTPN2-208ENST00000589216 IGHV3OR16-13A0A075B7E8 117 aa7.39□□□□□ -1.23
PTPN2-208ENST00000589216 IGHV3-74A0A0B4J1X5 117 aa7.39□□□□□ -1.23
PTPN2-208ENST00000589216 A0A1B0GU03 582 aa7.39□□□□□ -1.23
PTPN2-208ENST00000589216 CEBPZOSA8MTT3 80 aa7.39□□□□□ -1.23
PTPN2-208ENST00000589216 A8MZ25 164 aa7.39□□□□□ -1.23
PTPN2-208ENST00000589216 NUPL2O15504 423 aaKnown RBP7.39□□□□□ -1.23
PTPN2-208ENST00000589216 GNG7O60262 68 aa7.39□□□□□ -1.23
PTPN2-208ENST00000589216 NDUFB6O95139 128 aa7.39□□□□□ -1.23
PTPN2-208ENST00000589216 OPRK1P41145 380 aa7.39□□□□□ -1.23
PTPN2-208ENST00000589216 ELLP55199 621 aaPredicted RBP7.39□□□□□ -1.23
PTPN2-208ENST00000589216 TNFRSF9Q07011 255 aa7.39□□□□□ -1.23
PTPN2-208ENST00000589216 SMCO1Q147U7 214 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms