RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 CCL24O00175 119 aa14.65□□□□□ -0.06
CLPTM1-209ENST00000588855 GOSR2O14653 212 aa14.65□□□□□ -0.06
CLPTM1-209ENST00000588855 SYNGR2O43760 224 aa14.65□□□□□ -0.06
CLPTM1-209ENST00000588855 SSNA1O43805 119 aa14.65□□□□□ -0.06
CLPTM1-209ENST00000588855 MED6O75586 246 aa14.65□□□□□ -0.06
CLPTM1-209ENST00000588855 TRBV12-3P01733 135 aa14.65□□□□□ -0.06
CLPTM1-209ENST00000588855 PF4P02776 101 aa14.65□□□□□ -0.06
CLPTM1-209ENST00000588855 HTR2BP41595 481 aa14.65□□□□□ -0.06
CLPTM1-209ENST00000588855 GSG1LQ6UXU4 331 aa14.65□□□□□ -0.06
CLPTM1-209ENST00000588855 OR11H1Q8NG94 326 aa14.65□□□□□ -0.06
CLPTM1-209ENST00000588855 IGHV4OR15-8A0A075B7B6 117 aa14.64□□□□□ -0.07
CLPTM1-209ENST00000588855 A0A087WW49 117 aa14.64□□□□□ -0.07
CLPTM1-209ENST00000588855 K7EIM0 57 aa14.64□□□□□ -0.07
CLPTM1-209ENST00000588855 SIX6O95475 246 aa14.64□□□□□ -0.07
CLPTM1-209ENST00000588855 SUB1P53999 127 aaKnown RBP eCLIP14.64□□□□□ -0.07
CLPTM1-209ENST00000588855 POLR2GP62487 172 aaKnown RBP eCLIP14.64□□□□□ -0.07
CLPTM1-209ENST00000588855 FHL3Q13643 280 aa14.64□□□□□ -0.07
CLPTM1-209ENST00000588855 PVRIGQ6DKI7 326 aa14.64□□□□□ -0.07
CLPTM1-209ENST00000588855 OR1N2Q8NGR9 330 aa14.64□□□□□ -0.07
CLPTM1-209ENST00000588855 TMEM170AQ8WVE7 144 aa14.64□□□□□ -0.07
CLPTM1-209ENST00000588855 EEF1AKMT3Q96AZ1 226 aa14.64□□□□□ -0.07
CLPTM1-209ENST00000588855 C2orf50Q96LR7 162 aa14.64□□□□□ -0.07
CLPTM1-209ENST00000588855 CCDC140Q96MF4 163 aa14.64□□□□□ -0.07
CLPTM1-209ENST00000588855 WRBO00258 174 aa14.63□□□□□ -0.07
CLPTM1-209ENST00000588855 NPY1RP25929 384 aa14.63□□□□□ -0.07
CLPTM1-209ENST00000588855 MYCNOSP40205 109 aa14.63□□□□□ -0.07
CLPTM1-209ENST00000588855 PRR31Q5SQ13 230 aa14.63□□□□□ -0.07
CLPTM1-209ENST00000588855 PINX1Q96BK5 328 aaKnown RBP14.63□□□□□ -0.07
CLPTM1-209ENST00000588855 CXorf58Q96LI9 332 aa14.63□□□□□ -0.07
CLPTM1-209ENST00000588855 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.62□□□□□ -0.07
CLPTM1-209ENST00000588855 I3L2K1 104 aa14.62□□□□□ -0.07
CLPTM1-209ENST00000588855 SSSCA1O60232 199 aa14.62□□□□□ -0.07
CLPTM1-209ENST00000588855 MT-CO2P00403 227 aa14.62□□□□□ -0.07
CLPTM1-209ENST00000588855 IFNA10P01566 189 aa14.62□□□□□ -0.07
CLPTM1-209ENST00000588855 MBPP02686 304 aaPredicted RBP14.62□□□□□ -0.07
CLPTM1-209ENST00000588855 HSPB1P04792 205 aaKnown RBP14.62□□□□□ -0.07
CLPTM1-209ENST00000588855 ZNF616Q08AN1 781 aa14.62□□□□□ -0.07
CLPTM1-209ENST00000588855 C2orf83Q53S99 150 aa14.62□□□□□ -0.07
CLPTM1-209ENST00000588855 VN1R17PQ8TDU5 208 aa14.62□□□□□ -0.07
CLPTM1-209ENST00000588855 SCARB1Q8WTV0 552 aa14.62□□□□□ -0.07
CLPTM1-209ENST00000588855 PEF1Q9UBV8 284 aaKnown RBP14.62□□□□□ -0.07
CLPTM1-209ENST00000588855 U3KQ87 197 aa14.62□□□□□ -0.07
CLPTM1-209ENST00000588855 LINC01619G3V211 115 aa14.61□□□□□ -0.07
CLPTM1-209ENST00000588855 ZNF502Q8TBZ5 544 aa14.61□□□□□ -0.07
CLPTM1-209ENST00000588855 DPF1Q92782 380 aa14.61□□□□□ -0.07
CLPTM1-209ENST00000588855 CIB3Q96Q77 187 aaPredicted RBP14.61□□□□□ -0.07
CLPTM1-209ENST00000588855 RCL1Q9Y2P8 373 aaKnown RBP14.61□□□□□ -0.07
CLPTM1-209ENST00000588855 TRBV7-1A0A0A6YYK4 115 aa14.61□□□□□ -0.07
CLPTM1-209ENST00000588855 CORTO00230 105 aa14.61□□□□□ -0.07
CLPTM1-209ENST00000588855 IGHV3-48P01763 117 aa14.61□□□□□ -0.07
CLPTM1-209ENST00000588855 SLURP1P55000 103 aa14.61□□□□□ -0.07
CLPTM1-209ENST00000588855 CLEC19AQ6UXS0 136 aa14.61□□□□□ -0.07
CLPTM1-209ENST00000588855 LINC00482Q8N8I6 264 aa14.61□□□□□ -0.07
CLPTM1-209ENST00000588855 RANGRFQ9HD47 186 aaPredicted RBP14.61□□□□□ -0.07
CLPTM1-209ENST00000588855 MGAT4CQ9UBM8 478 aa14.61□□□□□ -0.07
CLPTM1-209ENST00000588855 C15orf62A8K5M9 175 aa14.6□□□□□ -0.07
CLPTM1-209ENST00000588855 PPP5D1E7EU14 171 aa14.6□□□□□ -0.07
CLPTM1-209ENST00000588855 H3BP45 60 aa14.6□□□□□ -0.07
CLPTM1-209ENST00000588855 H2BFSP57053 126 aa14.6□□□□□ -0.07
CLPTM1-209ENST00000588855 IL15RAQ13261 267 aa14.6□□□□□ -0.07
CLPTM1-209ENST00000588855 TREML4Q6UXN2 200 aa14.6□□□□□ -0.07
CLPTM1-209ENST00000588855 FNDC4Q9H6D8 234 aaPredicted RBP14.6□□□□□ -0.07
CLPTM1-209ENST00000588855 C21orf62Q9NYP8 219 aa14.6□□□□□ -0.07
CLPTM1-209ENST00000588855 LSM5Q9Y4Y9 91 aaKnown RBP14.6□□□□□ -0.07
CLPTM1-209ENST00000588855 F8W735 103 aaPredicted RBP14.59□□□□□ -0.07
CLPTM1-209ENST00000588855 K7EPK0 472 aa14.59□□□□□ -0.07
CLPTM1-209ENST00000588855 BMPR1BO00238 502 aa14.59□□□□□ -0.07
CLPTM1-209ENST00000588855 TMEM50AO95807 157 aa14.59□□□□□ -0.07
CLPTM1-209ENST00000588855 OR8U8P0C7N1 319 aa14.59□□□□□ -0.07
CLPTM1-209ENST00000588855 GPR183P32249 361 aa14.59□□□□□ -0.07
CLPTM1-209ENST00000588855 OPRK1P41145 380 aa14.59□□□□□ -0.07
CLPTM1-209ENST00000588855 OR4C12Q96R67 309 aa14.59□□□□□ -0.07
CLPTM1-209ENST00000588855 CLEC3BP05452 202 aa14.58□□□□□ -0.08
CLPTM1-209ENST00000588855 HOXD3P31249 432 aaPredicted RBP14.58□□□□□ -0.08
CLPTM1-209ENST00000588855 PAX9P55771 341 aa14.58□□□□□ -0.08
CLPTM1-209ENST00000588855 S100A10P60903 97 aa14.58□□□□□ -0.08
CLPTM1-209ENST00000588855 RAB32Q13637 225 aa14.58□□□□□ -0.08
CLPTM1-209ENST00000588855 MLANAQ16655 118 aa14.58□□□□□ -0.08
CLPTM1-209ENST00000588855 FAM209BQ5JX69 171 aa14.58□□□□□ -0.08
CLPTM1-209ENST00000588855 SPANXN5Q5MJ07 72 aa14.58□□□□□ -0.08
CLPTM1-209ENST00000588855 NOXA1Q86UR1 476 aa14.58□□□□□ -0.08
CLPTM1-209ENST00000588855 UBAC2Q8NBM4 344 aa14.58□□□□□ -0.08
CLPTM1-209ENST00000588855 RNASEH2CQ8TDP1 164 aaKnown RBP14.58□□□□□ -0.08
CLPTM1-209ENST00000588855 WDR89Q96FK6 387 aaPredicted RBP14.58□□□□□ -0.08
CLPTM1-209ENST00000588855 ZC4H2Q9NQZ6 224 aa14.58□□□□□ -0.08
CLPTM1-209ENST00000588855 PAIP2BQ9ULR5 123 aaKnown RBP14.58□□□□□ -0.08
CLPTM1-209ENST00000588855 ARL3P36405 182 aa14.57□□□□□ -0.08
CLPTM1-209ENST00000588855 RAB40CQ96S21 281 aa14.57□□□□□ -0.08
CLPTM1-209ENST00000588855 NMES1Q9C002 83 aa14.57□□□□□ -0.08
CLPTM1-209ENST00000588855 MED28Q9H204 178 aa14.57□□□□□ -0.08
CLPTM1-209ENST00000588855 PSENENQ9NZ42 101 aa14.57□□□□□ -0.08
CLPTM1-209ENST00000588855 MRPL36Q9P0J6 103 aaKnown RBP14.57□□□□□ -0.08
CLPTM1-209ENST00000588855 MGAM2Q2M2H8 2515 aa14.57□□□□□ -0.08
CLPTM1-209ENST00000588855 OR2T8A6NH00 312 aa14.56□□□□□ -0.08
CLPTM1-209ENST00000588855 LY86O95711 162 aa14.56□□□□□ -0.08
CLPTM1-209ENST00000588855 IFNA4P05014 189 aa14.56□□□□□ -0.08
CLPTM1-209ENST00000588855 CXCL3P19876 107 aa14.56□□□□□ -0.08
CLPTM1-209ENST00000588855 ZP3P21754 424 aa14.56□□□□□ -0.08
CLPTM1-209ENST00000588855 MFAP4P55083 255 aa14.56□□□□□ -0.08
CLPTM1-209ENST00000588855 ATP5IP56385 69 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms