RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 C3orf84H3BNL1 204 aa14.71□□□□□ -0.05
TPM4-208ENST00000588410 NUPL2O15504 423 aaKnown RBP14.71□□□□□ -0.05
TPM4-208ENST00000588410 ST8SIA3O43173 380 aa14.71□□□□□ -0.05
TPM4-208ENST00000588410 MT-CO2P00403 227 aa14.71□□□□□ -0.05
TPM4-208ENST00000588410 TNFSF8P32971 234 aa14.71□□□□□ -0.05
TPM4-208ENST00000588410 RELQ04864 619 aaPredicted RBP14.71□□□□□ -0.05
TPM4-208ENST00000588410 OR51S1Q8NGJ8 323 aa14.71□□□□□ -0.05
TPM4-208ENST00000588410 TXN2Q99757 166 aa14.71□□□□□ -0.05
TPM4-208ENST00000588410 RTBDNQ9BSG5 229 aaPredicted RBP14.71□□□□□ -0.05
TPM4-208ENST00000588410 TMEM222Q9H0R3 208 aa14.71□□□□□ -0.05
TPM4-208ENST00000588410 NAA60Q9H7X0 242 aa14.71□□□□□ -0.05
TPM4-208ENST00000588410 SRD5A3Q9H8P0 318 aa14.71□□□□□ -0.05
TPM4-208ENST00000588410 CEPT1Q9Y6K0 416 aa14.71□□□□□ -0.05
TPM4-208ENST00000588410 ANKRD20A5PA0PJZ0 165 aa14.7□□□□□ -0.06
TPM4-208ENST00000588410 F8W735 103 aaPredicted RBP14.7□□□□□ -0.06
TPM4-208ENST00000588410 I3L2K1 104 aa14.7□□□□□ -0.06
TPM4-208ENST00000588410 OR5AC1P0C628 307 aa14.7□□□□□ -0.06
TPM4-208ENST00000588410 P0C879 139 aa14.7□□□□□ -0.06
TPM4-208ENST00000588410 HOXA1P49639 335 aaPredicted RBP14.7□□□□□ -0.06
TPM4-208ENST00000588410 SUB1P53999 127 aaKnown RBP eCLIP14.7□□□□□ -0.06
TPM4-208ENST00000588410 DHODHQ02127 395 aa14.7□□□□□ -0.06
TPM4-208ENST00000588410 SCGB3A2Q96PL1 93 aa14.7□□□□□ -0.06
TPM4-208ENST00000588410 MCUBQ9NWR8 336 aa14.7□□□□□ -0.06
TPM4-208ENST00000588410 SCP2D1Q9UJQ7 156 aa14.7□□□□□ -0.06
TPM4-208ENST00000588410 YIF1AO95070 293 aa14.69□□□□□ -0.06
TPM4-208ENST00000588410 CTSGP08311 255 aa14.69□□□□□ -0.06
TPM4-208ENST00000588410 ADMP35318 185 aa14.69□□□□□ -0.06
TPM4-208ENST00000588410 ETV6P41212 452 aa14.69□□□□□ -0.06
TPM4-208ENST00000588410 LAMTOR1Q6IAA8 161 aa14.69□□□□□ -0.06
TPM4-208ENST00000588410 FAM219AQ8IW50 185 aa14.69□□□□□ -0.06
TPM4-208ENST00000588410 MUC7Q8TAX7 377 aa14.69□□□□□ -0.06
TPM4-208ENST00000588410 NXF2Q9GZY0 626 aaKnown RBP14.69□□□□□ -0.06
TPM4-208ENST00000588410 C5orf66Q9H5L9 145 aa14.69□□□□□ -0.06
TPM4-208ENST00000588410 GPR132Q9UNW8 380 aa14.69□□□□□ -0.06
TPM4-208ENST00000588410 IGHV3OR16-8A0A075B7F1 116 aa14.68□□□□□ -0.06
TPM4-208ENST00000588410 INS-IGF2F8WCM5 200 aa14.68□□□□□ -0.06
TPM4-208ENST00000588410 K7EMT4 169 aa14.68□□□□□ -0.06
TPM4-208ENST00000588410 GNG7O60262 68 aa14.68□□□□□ -0.06
TPM4-208ENST00000588410 CDS2O95674 445 aa14.68□□□□□ -0.06
TPM4-208ENST00000588410 IGHV3-48P01763 117 aa14.68□□□□□ -0.06
TPM4-208ENST00000588410 FCGR2BP31994 310 aaPredicted RBP14.68□□□□□ -0.06
TPM4-208ENST00000588410 RBPMSQ93062 196 aaKnown RBP14.68□□□□□ -0.06
TPM4-208ENST00000588410 WFDC10AQ9H1F0 79 aa14.68□□□□□ -0.06
TPM4-208ENST00000588410 HUWE1Q7Z6Z7 4374 aaKnown RBP14.67□□□□□ -0.06
TPM4-208ENST00000588410 A0A0G2JRQ6 117 aa14.67□□□□□ -0.06
TPM4-208ENST00000588410 CRYM-AS1A6NIL9 109 aa14.67□□□□□ -0.06
TPM4-208ENST00000588410 C15orf62A8K5M9 175 aa14.67□□□□□ -0.06
TPM4-208ENST00000588410 ZNF207O43670 478 aaKnown RBP14.67□□□□□ -0.06
TPM4-208ENST00000588410 DUSP18Q8NEJ0 188 aa14.67□□□□□ -0.06
TPM4-208ENST00000588410 GLYATL2Q8WU03 294 aa14.67□□□□□ -0.06
TPM4-208ENST00000588410 CITED4Q96RK1 184 aa14.67□□□□□ -0.06
TPM4-208ENST00000588410 SOSTQ9BQB4 213 aa14.67□□□□□ -0.06
TPM4-208ENST00000588410 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.67□□□□□ -0.06
TPM4-208ENST00000588410 KCNIP3Q9Y2W7 256 aa14.67□□□□□ -0.06
TPM4-208ENST00000588410 CORTO00230 105 aa14.66□□□□□ -0.06
TPM4-208ENST00000588410 S100A5P33763 92 aa14.66□□□□□ -0.06
TPM4-208ENST00000588410 FAUP35544 74 aaKnown RBP14.66□□□□□ -0.06
TPM4-208ENST00000588410 NPBWR1P48145 328 aa14.66□□□□□ -0.06
TPM4-208ENST00000588410 SPCS3P61009 180 aa14.66□□□□□ -0.06
TPM4-208ENST00000588410 PYDC2Q56P42 97 aa14.66□□□□□ -0.06
TPM4-208ENST00000588410 TMEM268Q5VZI3 342 aa14.66□□□□□ -0.06
TPM4-208ENST00000588410 LINC00322Q6ZN03 302 aaPredicted RBP14.66□□□□□ -0.06
TPM4-208ENST00000588410 SELENOHQ8IZQ5 122 aaKnown RBP14.66□□□□□ -0.06
TPM4-208ENST00000588410 SPAG8Q99932 426 aaPredicted RBP14.66□□□□□ -0.06
TPM4-208ENST00000588410 TENM3Q9P273 2699 aa14.66□□□□□ -0.06
TPM4-208ENST00000588410 RBMY1BA6NDE4 496 aaKnown RBP14.65□□□□□ -0.06
TPM4-208ENST00000588410 RBMY1EA6NEQ0 496 aaKnown RBP14.65□□□□□ -0.06
TPM4-208ENST00000588410 RBMY1DP0C7P1 496 aaKnown RBP14.65□□□□□ -0.06
TPM4-208ENST00000588410 LYL1P12980 280 aa14.65□□□□□ -0.06
TPM4-208ENST00000588410 LHFPL5Q8TAF8 219 aa14.65□□□□□ -0.06
TPM4-208ENST00000588410 TSPAN4O14817 238 aa14.64□□□□□ -0.07
TPM4-208ENST00000588410 RNASE2P10153 161 aaKnown RBP14.64□□□□□ -0.07
TPM4-208ENST00000588410 AP3S2P59780 193 aa14.64□□□□□ -0.07
TPM4-208ENST00000588410 Q6ZRM9 215 aa14.64□□□□□ -0.07
TPM4-208ENST00000588410 OR52E5Q8NH55 327 aa14.64□□□□□ -0.07
TPM4-208ENST00000588410 CACNG5Q9UF02 275 aa14.64□□□□□ -0.07
TPM4-208ENST00000588410 SMPXQ9UHP9 88 aa14.64□□□□□ -0.07
TPM4-208ENST00000588410 SCGB2A1O75556 95 aa14.63□□□□□ -0.07
TPM4-208ENST00000588410 AKR1C4P17516 323 aa14.63□□□□□ -0.07
TPM4-208ENST00000588410 TOMM5Q8N4H5 51 aa14.63□□□□□ -0.07
TPM4-208ENST00000588410 TMEM116Q8NCL8 245 aa14.63□□□□□ -0.07
TPM4-208ENST00000588410 IL22RA2Q969J5 263 aa14.63□□□□□ -0.07
TPM4-208ENST00000588410 GPR146Q96CH1 333 aa14.63□□□□□ -0.07
TPM4-208ENST00000588410 GINS3Q9BRX5 216 aa14.63□□□□□ -0.07
TPM4-208ENST00000588410 HIPK2Q9H2X6 1198 aa14.63□□□□□ -0.07
TPM4-208ENST00000588410 RETNQ9HD89 108 aa14.63□□□□□ -0.07
TPM4-208ENST00000588410 HEYLQ9NQ87 328 aaPredicted RBP14.63□□□□□ -0.07
TPM4-208ENST00000588410 TMEM56-RWDD3S4R434 201 aa14.63□□□□□ -0.07
TPM4-208ENST00000588410 TRAV14DV4A0A0A6YYC5 116 aa14.62□□□□□ -0.07
TPM4-208ENST00000588410 IGHV7-4-1A0A0J9YVY3 117 aa14.62□□□□□ -0.07
TPM4-208ENST00000588410 OR4C46A6NHA9 309 aa14.62□□□□□ -0.07
TPM4-208ENST00000588410 CEBPZOSA8MTT3 80 aa14.62□□□□□ -0.07
TPM4-208ENST00000588410 ANXA3P12429 323 aa14.62□□□□□ -0.07
TPM4-208ENST00000588410 OPRK1P41145 380 aa14.62□□□□□ -0.07
TPM4-208ENST00000588410 AARDQ4LEZ3 155 aa14.62□□□□□ -0.07
TPM4-208ENST00000588410 GALNT14Q96FL9 552 aa14.62□□□□□ -0.07
TPM4-208ENST00000588410 OR10C1Q96KK4 312 aa14.62□□□□□ -0.07
TPM4-208ENST00000588410 RHPN1-AS1Q9BWJ2 59 aa14.62□□□□□ -0.07
TPM4-208ENST00000588410 GGTLC1Q9BX51 225 aa14.62□□□□□ -0.07
TPM4-208ENST00000588410 CACFD1Q9UGQ2 172 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms