RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 SLC24A4Q8NFF2 622 aa8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 C4orf3Q8WVX3 66 aa8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 MISP3Q96FF7 219 aa8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 USMG5Q96IX5 58 aa8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 MED28Q9H204 178 aa8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 RCL1Q9Y2P8 373 aaKnown RBP8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 LSM5Q9Y4Y9 91 aaKnown RBP8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 STAB1Q9NY15 2570 aa8.27□□□□□ -1.08
SMARCA4-213ENST00000587988 A0A0G2JLM5 398 aa8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 ANKRD34BA5PLL1 514 aa8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 C15orf62A8K5M9 175 aa8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 I3L2K1 104 aa8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 K7EIM0 57 aa8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 TSPAN15O95858 294 aa8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 MT-CO2P00403 227 aa8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 IFNA10P01566 189 aa8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 TRBV12-3P01733 135 aa8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 IGHV3-48P01763 117 aa8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 LGALS1P09382 135 aaKnown RBP8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 NPY1RP25929 384 aa8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 SUB1P53999 127 aaKnown RBP eCLIP8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 EXOSC2Q13868 293 aaKnown RBP8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 ZNF343Q6P1L6 599 aa8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 ETV3LQ6ZN32 361 aa8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 OR1L6Q8NGR2 347 aa8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 SCARB1Q8WTV0 552 aa8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 PINX1Q96BK5 328 aaKnown RBP8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 RAX2Q96IS3 184 aa8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 OR4C12Q96R67 309 aa8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 NMES1Q9C002 83 aa8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 C11orf1Q9H5F2 150 aa8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 FNDC4Q9H6D8 234 aaPredicted RBP8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 U3KQ87 197 aa8.27□□□□□ -1.09
SMARCA4-213ENST00000587988 IGHV4OR15-8A0A075B7B6 117 aa8.26□□□□□ -1.09
SMARCA4-213ENST00000587988 A0A087WW49 117 aa8.26□□□□□ -1.09
SMARCA4-213ENST00000587988 H3BP45 60 aa8.26□□□□□ -1.09
SMARCA4-213ENST00000587988 CYB5BO43169 146 aa8.26□□□□□ -1.09
SMARCA4-213ENST00000587988 S100A10P60903 97 aa8.26□□□□□ -1.09
SMARCA4-213ENST00000587988 RRAS2P62070 204 aaPredicted RBP8.26□□□□□ -1.09
SMARCA4-213ENST00000587988 RUNX1Q01196 453 aa8.26□□□□□ -1.09
SMARCA4-213ENST00000587988 SPANXN5Q5MJ07 72 aa8.26□□□□□ -1.09
SMARCA4-213ENST00000587988 Q6ZNX1 250 aa8.26□□□□□ -1.09
SMARCA4-213ENST00000587988 OR11H1Q8NG94 326 aa8.26□□□□□ -1.09
SMARCA4-213ENST00000587988 SMIM8Q96KF7 97 aa8.26□□□□□ -1.09
SMARCA4-213ENST00000587988 CCDC140Q96MF4 163 aa8.26□□□□□ -1.09
SMARCA4-213ENST00000587988 CIB3Q96Q77 187 aaPredicted RBP8.26□□□□□ -1.09
SMARCA4-213ENST00000587988 PSENENQ9NZ42 101 aa8.26□□□□□ -1.09
SMARCA4-213ENST00000587988 THYN1Q9P016 225 aa8.26□□□□□ -1.09
SMARCA4-213ENST00000587988 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.25□□□□□ -1.09
SMARCA4-213ENST00000587988 PPP5D1E7EU14 171 aa8.25□□□□□ -1.09
SMARCA4-213ENST00000587988 F8W735 103 aaPredicted RBP8.25□□□□□ -1.09
SMARCA4-213ENST00000587988 H0YIZ8 118 aa8.25□□□□□ -1.09
SMARCA4-213ENST00000587988 CCL24O00175 119 aa8.25□□□□□ -1.09
SMARCA4-213ENST00000587988 CCNKO75909 580 aa8.25□□□□□ -1.09
SMARCA4-213ENST00000587988 HSPB1P04792 205 aaKnown RBP8.25□□□□□ -1.09
SMARCA4-213ENST00000587988 CYCSP99999 105 aaKnown RBP8.25□□□□□ -1.09
SMARCA4-213ENST00000587988 LRRC37A5PQ49AS3 106 aa8.25□□□□□ -1.09
SMARCA4-213ENST00000587988 CLEC19AQ6UXS0 136 aa8.25□□□□□ -1.09
SMARCA4-213ENST00000587988 ZNF502Q8TBZ5 544 aa8.25□□□□□ -1.09
SMARCA4-213ENST00000587988 VN1R17PQ8TDU5 208 aa8.25□□□□□ -1.09
SMARCA4-213ENST00000587988 PPP1R1CQ8WVI7 109 aa8.25□□□□□ -1.09
SMARCA4-213ENST00000587988 EEF1AKMT3Q96AZ1 226 aa8.25□□□□□ -1.09
SMARCA4-213ENST00000587988 CXorf58Q96LI9 332 aa8.25□□□□□ -1.09
SMARCA4-213ENST00000587988 RAB40CQ96S21 281 aa8.25□□□□□ -1.09
SMARCA4-213ENST00000587988 MRPL36Q9P0J6 103 aaKnown RBP8.25□□□□□ -1.09
SMARCA4-213ENST00000587988 PEF1Q9UBV8 284 aaKnown RBP8.25□□□□□ -1.09
SMARCA4-213ENST00000587988 PAIP2BQ9ULR5 123 aaKnown RBP8.25□□□□□ -1.09
SMARCA4-213ENST00000587988 ANK2Q01484 3957 aa8.25□□□□□ -1.09
SMARCA4-213ENST00000587988 TRBV7-1A0A0A6YYK4 115 aa8.24□□□□□ -1.09
SMARCA4-213ENST00000587988 PMS2P5A8MQ11 134 aa8.24□□□□□ -1.09
SMARCA4-213ENST00000587988 M0QZ24 198 aa8.24□□□□□ -1.09
SMARCA4-213ENST00000587988 CORTO00230 105 aa8.24□□□□□ -1.09
SMARCA4-213ENST00000587988 DEDDO75618 318 aa8.24□□□□□ -1.09
SMARCA4-213ENST00000587988 CLEC3BP05452 202 aa8.24□□□□□ -1.09
SMARCA4-213ENST00000587988 OPRK1P41145 380 aa8.24□□□□□ -1.09
SMARCA4-213ENST00000587988 OR4F17Q8NGA8 305 aa8.24□□□□□ -1.09
SMARCA4-213ENST00000587988 OR1N2Q8NGR9 330 aa8.24□□□□□ -1.09
SMARCA4-213ENST00000587988 RNASEH2CQ8TDP1 164 aaKnown RBP8.24□□□□□ -1.09
SMARCA4-213ENST00000587988 CHAC2Q8WUX2 184 aa8.24□□□□□ -1.09
SMARCA4-213ENST00000587988 OR4F4Q96R69 305 aa8.24□□□□□ -1.09
SMARCA4-213ENST00000587988 ZNF436Q9C0F3 470 aaPredicted RBP8.24□□□□□ -1.09
SMARCA4-213ENST00000587988 ZC4H2Q9NQZ6 224 aa8.24□□□□□ -1.09
SMARCA4-213ENST00000587988 C21orf62Q9NYP8 219 aa8.24□□□□□ -1.09
SMARCA4-213ENST00000587988 OR5AC2Q9NZP5 309 aa8.24□□□□□ -1.09
SMARCA4-213ENST00000587988 STRAPQ9Y3F4 350 aaKnown RBP8.24□□□□□ -1.09
SMARCA4-213ENST00000587988 FAM24AA6NFZ4 105 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 OR2T8A6NH00 312 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 PRSS46E5RG02 174 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 LINC01619G3V211 115 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 L7N2F9 121 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 BMPR1BO00238 502 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 TSC22D2O75157 780 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 LY86O95711 162 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 IFNA4P05014 189 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 OR8U8P0C7N1 319 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 GPR183P32249 361 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 MYCNOSP40205 109 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 SLURP1P55000 103 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 ATP5IP56385 69 aaPredicted RBP8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 TAS2R30P59541 319 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms