RNA–Protein interactions for RNA: ENST00000586318.1

TCF3-208, Transcript of transcription factor 3, human

TSL 3

Gene TCF3, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-208	ENST00000586318	RPLP1	P05386	114 aa	Known RBP	12.97	□□□□□ -0.33
TCF3-208	ENST00000586318	CD28	P10747	220 aa		12.97	□□□□□ -0.33
TCF3-208	ENST00000586318	KRTAP10-3	P60369	221 aa		12.97	□□□□□ -0.33
TCF3-208	ENST00000586318	PRSS54	Q6PEW0	395 aa		12.97	□□□□□ -0.33
TCF3-208	ENST00000586318	LCNL1	Q6ZST4	164 aa		12.97	□□□□□ -0.33
TCF3-208	ENST00000586318	FAM223A	Q8IWN6	122 aa		12.97	□□□□□ -0.33
TCF3-208	ENST00000586318	USMG5	Q96IX5	58 aa		12.97	□□□□□ -0.33
TCF3-208	ENST00000586318	OR4C12	Q96R67	309 aa		12.97	□□□□□ -0.33
TCF3-208	ENST00000586318	RNF126	Q9BV68	326 aa		12.97	□□□□□ -0.33
TCF3-208	ENST00000586318	FBXL7	Q9UJT9	491 aa		12.97	□□□□□ -0.33
TCF3-208	ENST00000586318	ATR	Q13535	2644 aa		12.96	□□□□□ -0.33
TCF3-208	ENST00000586318	TRAV14DV4	A0A0A6YYC5	116 aa		12.96	□□□□□ -0.33
TCF3-208	ENST00000586318		H3BP45	60 aa		12.96	□□□□□ -0.33
TCF3-208	ENST00000586318	NDUFB8	O95169	186 aa		12.96	□□□□□ -0.33
TCF3-208	ENST00000586318	OR8U8	P0C7N1	319 aa		12.96	□□□□□ -0.33
TCF3-208	ENST00000586318	RAB11A	P62491	216 aa		12.96	□□□□□ -0.33
TCF3-208	ENST00000586318	KIAA0141	Q14154	515 aa	Predicted RBP	12.96	□□□□□ -0.33
TCF3-208	ENST00000586318	ZNF491	Q8N8L2	437 aa		12.96	□□□□□ -0.33
TCF3-208	ENST00000586318	OR2T35	Q8NGX2	323 aa		12.96	□□□□□ -0.33
TCF3-208	ENST00000586318	RNASEH2C	Q8TDP1	164 aa	Known RBP	12.96	□□□□□ -0.33
TCF3-208	ENST00000586318	MISP3	Q96FF7	219 aa		12.96	□□□□□ -0.33
TCF3-208	ENST00000586318	OR5AC2	Q9NZP5	309 aa		12.96	□□□□□ -0.33
TCF3-208	ENST00000586318		A0A0G2JLM5	398 aa		12.95	□□□□□ -0.34
TCF3-208	ENST00000586318	TCRBV4S1A1T	A0A5B7	111 aa		12.95	□□□□□ -0.34
TCF3-208	ENST00000586318	LYL1	P12980	280 aa		12.95	□□□□□ -0.34
TCF3-208	ENST00000586318	P2RY1	P47900	373 aa		12.95	□□□□□ -0.34
TCF3-208	ENST00000586318	DEFA5	Q01523	94 aa		12.95	□□□□□ -0.34
TCF3-208	ENST00000586318	EXOSC2	Q13868	293 aa	Known RBP	12.95	□□□□□ -0.34
TCF3-208	ENST00000586318	TMEM14EP	Q6UXP3	125 aa		12.95	□□□□□ -0.34
TCF3-208	ENST00000586318	C12orf54	Q6X4T0	127 aa		12.95	□□□□□ -0.34
TCF3-208	ENST00000586318	C11orf44	Q8N8P7	122 aa		12.95	□□□□□ -0.34
TCF3-208	ENST00000586318	THAP6	Q8TBB0	222 aa		12.95	□□□□□ -0.34
TCF3-208	ENST00000586318	RANGRF	Q9HD47	186 aa	Predicted RBP	12.95	□□□□□ -0.34
TCF3-208	ENST00000586318	LYRM2	Q9NU23	88 aa	Predicted RBP	12.95	□□□□□ -0.34
TCF3-208	ENST00000586318	MBD2	Q9UBB5	411 aa		12.95	□□□□□ -0.34
TCF3-208	ENST00000586318	PAIP2B	Q9ULR5	123 aa	Known RBP	12.95	□□□□□ -0.34
TCF3-208	ENST00000586318		I3L2K1	104 aa		12.94	□□□□□ -0.34
TCF3-208	ENST00000586318		K7EIM0	57 aa		12.94	□□□□□ -0.34
TCF3-208	ENST00000586318	CCNK	O75909	580 aa		12.94	□□□□□ -0.34
TCF3-208	ENST00000586318	IFNA4	P05014	189 aa		12.94	□□□□□ -0.34
TCF3-208	ENST00000586318	CAV2	P51636	162 aa		12.94	□□□□□ -0.34
TCF3-208	ENST00000586318	ATP5G2	Q06055	141 aa		12.94	□□□□□ -0.34
TCF3-208	ENST00000586318	C15orf32	Q32M92	178 aa		12.94	□□□□□ -0.34
TCF3-208	ENST00000586318		Q5BKY6	102 aa		12.94	□□□□□ -0.34
TCF3-208	ENST00000586318	ETV3L	Q6ZN32	361 aa		12.94	□□□□□ -0.34
TCF3-208	ENST00000586318	VN1R17P	Q8TDU5	208 aa		12.94	□□□□□ -0.34
TCF3-208	ENST00000586318	ST6GAL2	Q96JF0	529 aa		12.94	□□□□□ -0.34
TCF3-208	ENST00000586318	CXorf58	Q96LI9	332 aa		12.94	□□□□□ -0.34
TCF3-208	ENST00000586318	UBE2E2	Q96LR5	201 aa		12.94	□□□□□ -0.34
TCF3-208	ENST00000586318	CITED1	Q99966	193 aa		12.94	□□□□□ -0.34
TCF3-208	ENST00000586318	CITED2	Q99967	270 aa	Predicted RBP	12.94	□□□□□ -0.34
TCF3-208	ENST00000586318	ZNF747	Q9BV97	191 aa		12.94	□□□□□ -0.34
TCF3-208	ENST00000586318	TSSC4	Q9Y5U2	329 aa	Predicted RBP	12.94	□□□□□ -0.34
TCF3-208	ENST00000586318	RPS10-NUDT3	A0A1W2PQS6	291 aa		12.93	□□□□□ -0.34
TCF3-208	ENST00000586318	FAM24A	A6NFZ4	105 aa		12.93	□□□□□ -0.34
TCF3-208	ENST00000586318		G3V3Q6	166 aa		12.93	□□□□□ -0.34
TCF3-208	ENST00000586318	SCAF4	O95104	1147 aa	Known RBP	12.93	□□□□□ -0.34
TCF3-208	ENST00000586318	MT-CO2	P00403	227 aa		12.93	□□□□□ -0.34
TCF3-208	ENST00000586318	SLC25A4	P12235	298 aa		12.93	□□□□□ -0.34
TCF3-208	ENST00000586318	CDX1	P47902	265 aa	Predicted RBP	12.93	□□□□□ -0.34
TCF3-208	ENST00000586318	KHDC1L	Q5JSQ8	128 aa		12.93	□□□□□ -0.34
TCF3-208	ENST00000586318	AKAP14	Q86UN6	197 aa		12.93	□□□□□ -0.34
TCF3-208	ENST00000586318	TMEM252	Q8N6L7	170 aa		12.93	□□□□□ -0.34
TCF3-208	ENST00000586318	PINX1	Q96BK5	328 aa	Known RBP	12.93	□□□□□ -0.34
TCF3-208	ENST00000586318	PMS2P5	A8MQ11	134 aa		12.92	□□□□□ -0.34
TCF3-208	ENST00000586318	PRSS46	E5RG02	174 aa		12.92	□□□□□ -0.34
TCF3-208	ENST00000586318	METTL15P1	P0C7V9	234 aa		12.92	□□□□□ -0.34
TCF3-208	ENST00000586318	OPRK1	P41145	380 aa		12.92	□□□□□ -0.34
TCF3-208	ENST00000586318	CD69	Q07108	199 aa		12.92	□□□□□ -0.34
TCF3-208	ENST00000586318	ETFRF1	Q6IPR1	90 aa		12.92	□□□□□ -0.34
TCF3-208	ENST00000586318	TCTE3	Q8IZS6	198 aa		12.92	□□□□□ -0.34
TCF3-208	ENST00000586318	SCARB1	Q8WTV0	552 aa		12.92	□□□□□ -0.34
TCF3-208	ENST00000586318	DCUN1D4	Q92564	292 aa		12.92	□□□□□ -0.34
TCF3-208	ENST00000586318	EEF1AKMT3	Q96AZ1	226 aa		12.92	□□□□□ -0.34
TCF3-208	ENST00000586318	SLC25A31	Q9H0C2	315 aa		12.92	□□□□□ -0.34
TCF3-208	ENST00000586318	FNDC4	Q9H6D8	234 aa	Predicted RBP	12.92	□□□□□ -0.34
TCF3-208	ENST00000586318	TRBV7-1	A0A0A6YYK4	115 aa		12.91	□□□□□ -0.34
TCF3-208	ENST00000586318	IGHV3-21	A0A0B4J1V1	117 aa		12.91	□□□□□ -0.34
TCF3-208	ENST00000586318	IGSF23	A1L1A6	192 aa		12.91	□□□□□ -0.34
TCF3-208	ENST00000586318	MFSD2B	A6NFX1	497 aa		12.91	□□□□□ -0.34
TCF3-208	ENST00000586318	IGHV3-11	P01762	117 aa		12.91	□□□□□ -0.34
TCF3-208	ENST00000586318	LGALS1	P09382	135 aa	Known RBP	12.91	□□□□□ -0.34
TCF3-208	ENST00000586318	GPX4	P36969	197 aa	Predicted RBP	12.91	□□□□□ -0.34
TCF3-208	ENST00000586318	KRTAP21-3	Q3LHN1	58 aa		12.91	□□□□□ -0.34
TCF3-208	ENST00000586318	FAM209B	Q5JX69	171 aa		12.91	□□□□□ -0.34
TCF3-208	ENST00000586318	ZNF343	Q6P1L6	599 aa		12.91	□□□□□ -0.34
TCF3-208	ENST00000586318	NDUFA11	Q86Y39	141 aa		12.91	□□□□□ -0.34
TCF3-208	ENST00000586318	C3orf56	Q8N813	242 aa		12.91	□□□□□ -0.34
TCF3-208	ENST00000586318	ZNF502	Q8TBZ5	544 aa		12.91	□□□□□ -0.34
TCF3-208	ENST00000586318	MDFI	Q99750	246 aa		12.91	□□□□□ -0.34
TCF3-208	ENST00000586318	GNB4	Q9HAV0	340 aa		12.91	□□□□□ -0.34
TCF3-208	ENST00000586318	SMLR1	H3BR10	107 aa		12.9	□□□□□ -0.34
TCF3-208	ENST00000586318	SULT1A1	P50225	295 aa		12.9	□□□□□ -0.34
TCF3-208	ENST00000586318	MLANA	Q16655	118 aa		12.9	□□□□□ -0.34
TCF3-208	ENST00000586318	HIST2H2BD	Q6DRA6	164 aa		12.9	□□□□□ -0.34
TCF3-208	ENST00000586318	OR8G2P	Q6IF36	304 aa		12.9	□□□□□ -0.34
TCF3-208	ENST00000586318	C18orf65	Q6ZTR6	163 aa		12.9	□□□□□ -0.34
TCF3-208	ENST00000586318	SLC16A13	Q7RTY0	426 aa		12.9	□□□□□ -0.34
TCF3-208	ENST00000586318	HAPLN4	Q86UW8	402 aa		12.9	□□□□□ -0.34
TCF3-208	ENST00000586318	STX12	Q86Y82	276 aa		12.9	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms