RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 OR2C3Q8N628 320 aa8.61□□□□□ -1.03
LIG3-207ENST00000586119 OR1L6Q8NGR2 347 aa8.61□□□□□ -1.03
LIG3-207ENST00000586119 VSTM2AQ8TAG5 236 aa8.61□□□□□ -1.03
LIG3-207ENST00000586119 MARCH1Q8TCQ1 289 aa8.61□□□□□ -1.03
LIG3-207ENST00000586119 MRGPRFQ96AM1 343 aa8.61□□□□□ -1.03
LIG3-207ENST00000586119 AIFM2Q9BRQ8 373 aa8.61□□□□□ -1.03
LIG3-207ENST00000586119 MRPL27Q9P0M9 148 aaKnown RBP8.61□□□□□ -1.03
LIG3-207ENST00000586119 COPZ2Q9P299 210 aa8.61□□□□□ -1.03
LIG3-207ENST00000586119 TRBV7-1A0A0A6YYK4 115 aa8.6□□□□□ -1.03
LIG3-207ENST00000586119 LINC00854A0A1B0GVQ3 168 aa8.6□□□□□ -1.03
LIG3-207ENST00000586119 UPK2O00526 184 aa8.6□□□□□ -1.03
LIG3-207ENST00000586119 NDUFB6O95139 128 aa8.6□□□□□ -1.03
LIG3-207ENST00000586119 HRASP01112 189 aa8.6□□□□□ -1.03
LIG3-207ENST00000586119 HIST1H1BP16401 226 aaKnown RBP8.6□□□□□ -1.03
LIG3-207ENST00000586119 F2RP25116 425 aa8.6□□□□□ -1.03
LIG3-207ENST00000586119 MFAP2P55001 183 aa8.6□□□□□ -1.03
LIG3-207ENST00000586119 PIGPP57054 158 aa8.6□□□□□ -1.03
LIG3-207ENST00000586119 DEFA1P59665 94 aa8.6□□□□□ -1.03
LIG3-207ENST00000586119 DEFA3P59666 94 aa8.6□□□□□ -1.03
LIG3-207ENST00000586119 ANKRD55Q3KP44 614 aa8.6□□□□□ -1.03
LIG3-207ENST00000586119 ODF3L2Q3SX64 289 aa8.6□□□□□ -1.03
LIG3-207ENST00000586119 PHLDA2Q53GA4 152 aa8.6□□□□□ -1.03
LIG3-207ENST00000586119 PLET1Q6UQ28 207 aa8.6□□□□□ -1.03
LIG3-207ENST00000586119 TBC1D26Q86UD7 250 aa8.6□□□□□ -1.03
LIG3-207ENST00000586119 RTBDNQ9BSG5 229 aaPredicted RBP8.6□□□□□ -1.03
LIG3-207ENST00000586119 ZNF436Q9C0F3 470 aaPredicted RBP8.6□□□□□ -1.03
LIG3-207ENST00000586119 BET1LQ9NYM9 111 aa8.6□□□□□ -1.03
LIG3-207ENST00000586119 TRAV25A0A0B4J276 109 aa8.59□□□□□ -1.03
LIG3-207ENST00000586119 OR2T8A6NH00 312 aa8.59□□□□□ -1.03
LIG3-207ENST00000586119 HPRT1P00492 218 aa8.59□□□□□ -1.03
LIG3-207ENST00000586119 RLN1P04808 185 aa8.59□□□□□ -1.03
LIG3-207ENST00000586119 HNRNPCP07910 306 aaKnown RBP eCLIP8.59□□□□□ -1.03
LIG3-207ENST00000586119 FCGR2BP31994 310 aaPredicted RBP8.59□□□□□ -1.03
LIG3-207ENST00000586119 BMI1P35226 326 aa8.59□□□□□ -1.03
LIG3-207ENST00000586119 TAS2R31P59538 309 aa8.59□□□□□ -1.03
LIG3-207ENST00000586119 CADM3Q8N126 398 aa8.59□□□□□ -1.03
LIG3-207ENST00000586119 OR5B3Q8NH48 314 aa8.59□□□□□ -1.03
LIG3-207ENST00000586119 OR51H1Q8NH63 302 aa8.59□□□□□ -1.03
LIG3-207ENST00000586119 ZNF414Q96IQ9 312 aa8.59□□□□□ -1.03
LIG3-207ENST00000586119 CXorf58Q96LI9 332 aa8.59□□□□□ -1.03
LIG3-207ENST00000586119 CHRDL1Q9BU40 450 aa8.59□□□□□ -1.03
LIG3-207ENST00000586119 C5orf66Q9H5L9 145 aa8.59□□□□□ -1.03
LIG3-207ENST00000586119 PLEKHA2Q9HB19 425 aa8.59□□□□□ -1.03
LIG3-207ENST00000586119 COMMD9Q9P000 198 aa8.59□□□□□ -1.03
LIG3-207ENST00000586119 PIGBOS1A0A0B4J2F0 54 aa8.58□□□□□ -1.04
LIG3-207ENST00000586119 NUPR2A6NF83 97 aa8.58□□□□□ -1.04
LIG3-207ENST00000586119 TGOLN2O43493 480 aa8.58□□□□□ -1.04
LIG3-207ENST00000586119 DHFRP00374 187 aa8.58□□□□□ -1.04
LIG3-207ENST00000586119 BTCP35070 178 aa8.58□□□□□ -1.04
LIG3-207ENST00000586119 CCR6P51684 374 aa8.58□□□□□ -1.04
LIG3-207ENST00000586119 UBE2MP61081 183 aaKnown RBP8.58□□□□□ -1.04
LIG3-207ENST00000586119 DHODHQ02127 395 aa8.58□□□□□ -1.04
LIG3-207ENST00000586119 POU2AF1Q16633 256 aa8.58□□□□□ -1.04
LIG3-207ENST00000586119 RGS21Q2M5E4 152 aa8.58□□□□□ -1.04
LIG3-207ENST00000586119 SLC25A24Q6NUK1 477 aa8.58□□□□□ -1.04
LIG3-207ENST00000586119 Q6ZWC4 215 aa8.58□□□□□ -1.04
LIG3-207ENST00000586119 APRG1Q8IVJ8 170 aa8.58□□□□□ -1.04
LIG3-207ENST00000586119 OR4A5Q8NH83 315 aa8.58□□□□□ -1.04
LIG3-207ENST00000586119 TMEM190Q8WZ59 177 aa8.58□□□□□ -1.04
LIG3-207ENST00000586119 RNF183Q96D59 192 aa8.58□□□□□ -1.04
LIG3-207ENST00000586119 GALNT14Q96FL9 552 aa8.58□□□□□ -1.04
LIG3-207ENST00000586119 NAA60Q9H7X0 242 aa8.58□□□□□ -1.04
LIG3-207ENST00000586119 TBC1D24Q9ULP9 559 aa8.58□□□□□ -1.04
LIG3-207ENST00000586119 KCNIP3Q9Y2W7 256 aa8.58□□□□□ -1.04
LIG3-207ENST00000586119 UFC1Q9Y3C8 167 aa8.58□□□□□ -1.04
LIG3-207ENST00000586119 IGHV3-49A0A0A0MS15 119 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 TEX13DA0A0J9YY54 714 aaPredicted RBP8.57□□□□□ -1.04
LIG3-207ENST00000586119 C3orf85A0A1B0GTC6 90 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 TEX50A0A1B0GTY4 177 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 FAM240BA0A1B0GVZ2 78 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 CRYM-AS1A6NIL9 109 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 F8W735 103 aaPredicted RBP8.57□□□□□ -1.04
LIG3-207ENST00000586119 TSPAN4O14817 238 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 ATG12O94817 140 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 ANXA3P12429 323 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 NQO2P16083 231 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 PI3P19957 117 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 APOC4P55056 127 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 ELLP55199 621 aaPredicted RBP8.57□□□□□ -1.04
LIG3-207ENST00000586119 IFITM3Q01628 133 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 WT1-ASQ06250 92 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 TMEM128Q5BJH2 165 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 CENPSQ8N2Z9 138 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 PHLDA1Q8WV24 401 aaPredicted RBP8.57□□□□□ -1.04
LIG3-207ENST00000586119 MARC2Q969Z3 335 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 SPAG8Q99932 426 aaPredicted RBP8.57□□□□□ -1.04
LIG3-207ENST00000586119 C20orf24Q9BUV8 137 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 TMEM140Q9NV12 185 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 TP53TG1Q9Y2A0 90 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 NSG2Q9Y328 171 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 DNAH6Q9C0G6 4158 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 AGRNO00468 2067 aa8.57□□□□□ -1.04
LIG3-207ENST00000586119 KIAA1109Q2LD37 5005 aa8.56□□□□□ -1.04
LIG3-207ENST00000586119 TCRBP04435 133 aa8.56□□□□□ -1.04
LIG3-207ENST00000586119 SERPINE2P07093 398 aa8.56□□□□□ -1.04
LIG3-207ENST00000586119 FGF2P09038 288 aa8.56□□□□□ -1.04
LIG3-207ENST00000586119 OR13C7P0DN81 318 aa8.56□□□□□ -1.04
LIG3-207ENST00000586119 UCP1P25874 307 aa8.56□□□□□ -1.04
LIG3-207ENST00000586119 ADMP35318 185 aa8.56□□□□□ -1.04
LIG3-207ENST00000586119 LPAR6P43657 344 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms