RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 SMPXQ9UHP9 88 aa12.67□□□□□ -0.38
MBD3-204ENST00000585967 IGHV3OR16-8A0A075B7F1 116 aa12.66□□□□□ -0.38
MBD3-204ENST00000585967 F8W735 103 aaPredicted RBP12.66□□□□□ -0.38
MBD3-204ENST00000585967 ZNF207O43670 478 aaKnown RBP12.66□□□□□ -0.38
MBD3-204ENST00000585967 HPGDSO60760 199 aa12.66□□□□□ -0.38
MBD3-204ENST00000585967 B3GALNT1O75752 331 aa12.66□□□□□ -0.38
MBD3-204ENST00000585967 MT-CO2P00403 227 aa12.66□□□□□ -0.38
MBD3-204ENST00000585967 ELK1P19419 428 aa12.66□□□□□ -0.38
MBD3-204ENST00000585967 LYG2Q86SG7 212 aa12.66□□□□□ -0.38
MBD3-204ENST00000585967 DUSP18Q8NEJ0 188 aa12.66□□□□□ -0.38
MBD3-204ENST00000585967 RNASE11Q8TAA1 199 aaKnown RBP12.66□□□□□ -0.38
MBD3-204ENST00000585967 ZFAND1Q8TCF1 268 aa12.66□□□□□ -0.38
MBD3-204ENST00000585967 OR10C1Q96KK4 312 aa12.66□□□□□ -0.38
MBD3-204ENST00000585967 NXF2Q9GZY0 626 aaKnown RBP12.66□□□□□ -0.38
MBD3-204ENST00000585967 COPZ2Q9P299 210 aa12.66□□□□□ -0.38
MBD3-204ENST00000585967 KLK5Q9Y337 293 aaPredicted RBP12.66□□□□□ -0.38
MBD3-204ENST00000585967 A0A0J9YWU9 116 aa12.65□□□□□ -0.38
MBD3-204ENST00000585967 I3L2K1 104 aa12.65□□□□□ -0.38
MBD3-204ENST00000585967 IFNA17P01571 189 aa12.65□□□□□ -0.38
MBD3-204ENST00000585967 PIGPP57054 158 aa12.65□□□□□ -0.38
MBD3-204ENST00000585967 PMS2P11Q13670 270 aa12.65□□□□□ -0.38
MBD3-204ENST00000585967 RNF183Q96D59 192 aa12.65□□□□□ -0.38
MBD3-204ENST00000585967 RRNAD1Q96FB5 475 aaKnown RBP12.65□□□□□ -0.38
MBD3-204ENST00000585967 DBX1A6NMT0 343 aa12.64□□□□□ -0.39
MBD3-204ENST00000585967 M0QYG6 137 aa12.64□□□□□ -0.39
MBD3-204ENST00000585967 CHEK1O14757 476 aa12.64□□□□□ -0.39
MBD3-204ENST00000585967 RPL35AP18077 110 aaKnown RBP12.64□□□□□ -0.39
MBD3-204ENST00000585967 HOXA1P49639 335 aaPredicted RBP12.64□□□□□ -0.39
MBD3-204ENST00000585967 TRIM16LQ309B1 348 aa12.64□□□□□ -0.39
MBD3-204ENST00000585967 NARS2Q96I59 477 aaKnown RBP12.64□□□□□ -0.39
MBD3-204ENST00000585967 RNF2Q99496 336 aa12.64□□□□□ -0.39
MBD3-204ENST00000585967 ZNF182P17025 639 aaPredicted RBP12.63□□□□□ -0.39
MBD3-204ENST00000585967 TAS2R19P59542 299 aa12.63□□□□□ -0.39
MBD3-204ENST00000585967 ZNF600Q6ZNG1 722 aa12.63□□□□□ -0.39
MBD3-204ENST00000585967 GATAD1Q8WUU5 269 aa12.63□□□□□ -0.39
MBD3-204ENST00000585967 MAP6D1Q9H9H5 199 aa12.63□□□□□ -0.39
MBD3-204ENST00000585967 EXTL2Q9UBQ6 330 aa12.63□□□□□ -0.39
MBD3-204ENST00000585967 C3orf85A0A1B0GTC6 90 aa12.62□□□□□ -0.39
MBD3-204ENST00000585967 A0A1W2PS18 150 aa12.62□□□□□ -0.39
MBD3-204ENST00000585967 MPTX1A8MV57 137 aa12.62□□□□□ -0.39
MBD3-204ENST00000585967 INS-IGF2F8WCM5 200 aa12.62□□□□□ -0.39
MBD3-204ENST00000585967 DNASE2O00115 360 aaPredicted RBP12.62□□□□□ -0.39
MBD3-204ENST00000585967 IGKV1-39P01597 117 aa12.62□□□□□ -0.39
MBD3-204ENST00000585967 IGKV1D-39P04432 117 aa12.62□□□□□ -0.39
MBD3-204ENST00000585967 PPP5CP53041 499 aa12.62□□□□□ -0.39
MBD3-204ENST00000585967 MRPS10P82664 201 aaKnown RBP12.62□□□□□ -0.39
MBD3-204ENST00000585967 SSBP1Q04837 148 aaKnown RBP12.62□□□□□ -0.39
MBD3-204ENST00000585967 RNASE12Q5GAN4 147 aaKnown RBP12.62□□□□□ -0.39
MBD3-204ENST00000585967 LINC00476Q8WZB0 136 aa12.62□□□□□ -0.39
MBD3-204ENST00000585967 MTFP1Q9UDX5 166 aa12.62□□□□□ -0.39
MBD3-204ENST00000585967 PLECQ15149 4684 aaKnown RBP12.62□□□□□ -0.39
MBD3-204ENST00000585967 ST8SIA3O43173 380 aa12.61□□□□□ -0.39
MBD3-204ENST00000585967 DFFBO76075 338 aa12.61□□□□□ -0.39
MBD3-204ENST00000585967 CD3DP04234 171 aa12.61□□□□□ -0.39
MBD3-204ENST00000585967 TFPI2P48307 235 aa12.61□□□□□ -0.39
MBD3-204ENST00000585967 MEF2DQ14814 521 aa12.61□□□□□ -0.39
MBD3-204ENST00000585967 TCF24Q7RTU0 167 aa12.61□□□□□ -0.39
MBD3-204ENST00000585967 LHFPL1Q86WI0 220 aa12.61□□□□□ -0.39
MBD3-204ENST00000585967 FAM219AQ8IW50 185 aa12.61□□□□□ -0.39
MBD3-204ENST00000585967 CSTL1Q9H114 145 aa12.61□□□□□ -0.39
MBD3-204ENST00000585967 KLK11Q9UBX7 282 aa12.61□□□□□ -0.39
MBD3-204ENST00000585967 CACFD1Q9UGQ2 172 aa12.61□□□□□ -0.39
MBD3-204ENST00000585967 C14orf166Q9Y224 244 aaKnown RBP12.61□□□□□ -0.39
MBD3-204ENST00000585967 IGKV3-7A0A075B6H7 116 aa12.6□□□□□ -0.39
MBD3-204ENST00000585967 TRAV2A0A0B4J234 112 aa12.6□□□□□ -0.39
MBD3-204ENST00000585967 GABARAPO95166 117 aa12.6□□□□□ -0.39
MBD3-204ENST00000585967 OPRK1P41145 380 aa12.6□□□□□ -0.39
MBD3-204ENST00000585967 EIF2B2P49770 351 aaKnown RBP12.6□□□□□ -0.39
MBD3-204ENST00000585967 RPL11P62913 178 aaKnown RBP12.6□□□□□ -0.39
MBD3-204ENST00000585967 SCGB2B2Q4G0G5 96 aa12.6□□□□□ -0.39
MBD3-204ENST00000585967 CEMP1Q6PRD7 247 aaPredicted RBP12.6□□□□□ -0.39
MBD3-204ENST00000585967 APRG1Q8IVJ8 170 aa12.6□□□□□ -0.39
MBD3-204ENST00000585967 OR52I2Q8NH67 350 aa12.6□□□□□ -0.39
MBD3-204ENST00000585967 TERB2Q8NHR7 220 aa12.6□□□□□ -0.39
MBD3-204ENST00000585967 TP53RKQ96S44 253 aa12.6□□□□□ -0.39
MBD3-204ENST00000585967 MFFQ9GZY8 342 aa12.6□□□□□ -0.39
MBD3-204ENST00000585967 RABL2AQ9UBK7 228 aaPredicted RBP12.6□□□□□ -0.39
MBD3-204ENST00000585967 RABL2BQ9UNT1 228 aa12.6□□□□□ -0.39
MBD3-204ENST00000585967 IGHV3-49A0A0A0MS15 119 aa12.59□□□□□ -0.39
MBD3-204ENST00000585967 RPS10-NUDT3A0A1W2PQS6 291 aa12.59□□□□□ -0.39
MBD3-204ENST00000585967 GABARAPH6UMI1 98 aa12.59□□□□□ -0.39
MBD3-204ENST00000585967 RGS5O15539 181 aa12.59□□□□□ -0.39
MBD3-204ENST00000585967 RAB3DO95716 219 aa12.59□□□□□ -0.39
MBD3-204ENST00000585967 LY6G6CO95867 125 aa12.59□□□□□ -0.39
MBD3-204ENST00000585967 PI3P19957 117 aa12.59□□□□□ -0.39
MBD3-204ENST00000585967 SPINK9Q5DT21 86 aa12.59□□□□□ -0.39
MBD3-204ENST00000585967 TOMM20LQ6UXN7 152 aa12.59□□□□□ -0.39
MBD3-204ENST00000585967 TMEM229BQ8NBD8 167 aa12.59□□□□□ -0.39
MBD3-204ENST00000585967 GRAMD2BQ96HH9 432 aa12.59□□□□□ -0.39
MBD3-204ENST00000585967 METTL26Q96S19 204 aa12.59□□□□□ -0.39
MBD3-204ENST00000585967 PUS1Q9Y606 427 aaKnown RBP eCLIP12.59□□□□□ -0.39
MBD3-204ENST00000585967 TRAV30A0A087WSZ9 112 aa12.58□□□□□ -0.4
MBD3-204ENST00000585967 IGKV1-5P01602 117 aa12.58□□□□□ -0.4
MBD3-204ENST00000585967 IGHV3-48P01763 117 aa12.58□□□□□ -0.4
MBD3-204ENST00000585967 NPPCP23582 126 aa12.58□□□□□ -0.4
MBD3-204ENST00000585967 UCP1P25874 307 aa12.58□□□□□ -0.4
MBD3-204ENST00000585967 SURF2Q15527 256 aaPredicted RBP12.58□□□□□ -0.4
MBD3-204ENST00000585967 STEAP1BQ6NZ63 245 aa12.58□□□□□ -0.4
MBD3-204ENST00000585967 GBGT1Q8N5D6 347 aa12.58□□□□□ -0.4
MBD3-204ENST00000585967 RARRES2Q99969 163 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms