RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 DPF1Q92782 380 aa11.32□□□□□ -0.6
SCAMP4-209ENST00000585335 RAB40CQ96S21 281 aa11.32□□□□□ -0.6
SCAMP4-209ENST00000585335 RPS10-NUDT3A0A1W2PQS6 291 aa11.31□□□□□ -0.6
SCAMP4-209ENST00000585335 I3L521 148 aa11.31□□□□□ -0.6
SCAMP4-209ENST00000585335 L7N2F9 121 aa11.31□□□□□ -0.6
SCAMP4-209ENST00000585335 SSSCA1O60232 199 aa11.31□□□□□ -0.6
SCAMP4-209ENST00000585335 NDUFB8O95169 186 aa11.31□□□□□ -0.6
SCAMP4-209ENST00000585335 PVALBP20472 110 aaPredicted RBP11.31□□□□□ -0.6
SCAMP4-209ENST00000585335 MYCNOSP40205 109 aa11.31□□□□□ -0.6
SCAMP4-209ENST00000585335 POLR2GP62487 172 aaKnown RBP eCLIP11.31□□□□□ -0.6
SCAMP4-209ENST00000585335 VAMP2P63027 116 aa11.31□□□□□ -0.6
SCAMP4-209ENST00000585335 DEFA5Q01523 94 aa11.31□□□□□ -0.6
SCAMP4-209ENST00000585335 BSXQ3C1V8 233 aa11.31□□□□□ -0.6
SCAMP4-209ENST00000585335 C2orf83Q53S99 150 aa11.31□□□□□ -0.6
SCAMP4-209ENST00000585335 ZNF343Q6P1L6 599 aa11.31□□□□□ -0.6
SCAMP4-209ENST00000585335 PINX1Q96BK5 328 aaKnown RBP11.31□□□□□ -0.6
SCAMP4-209ENST00000585335 GAR1Q9NY12 217 aaKnown RBP11.31□□□□□ -0.6
SCAMP4-209ENST00000585335 CCL24O00175 119 aa11.3□□□□□ -0.6
SCAMP4-209ENST00000585335 MBPP02686 304 aaPredicted RBP11.3□□□□□ -0.6
SCAMP4-209ENST00000585335 IFNA4P05014 189 aa11.3□□□□□ -0.6
SCAMP4-209ENST00000585335 OR8U8P0C7N1 319 aa11.3□□□□□ -0.6
SCAMP4-209ENST00000585335 MFAP2P55001 183 aa11.3□□□□□ -0.6
SCAMP4-209ENST00000585335 S100A10P60903 97 aa11.3□□□□□ -0.6
SCAMP4-209ENST00000585335 ZNF616Q08AN1 781 aa11.3□□□□□ -0.6
SCAMP4-209ENST00000585335 ETFRF1Q6IPR1 90 aa11.3□□□□□ -0.6
SCAMP4-209ENST00000585335 C18orf65Q6ZTR6 163 aa11.3□□□□□ -0.6
SCAMP4-209ENST00000585335 OR1N2Q8NGR9 330 aa11.3□□□□□ -0.6
SCAMP4-209ENST00000585335 RNASEH2CQ8TDP1 164 aaKnown RBP11.3□□□□□ -0.6
SCAMP4-209ENST00000585335 NMES1Q9C002 83 aa11.3□□□□□ -0.6
SCAMP4-209ENST00000585335 RANGRFQ9HD47 186 aaPredicted RBP11.3□□□□□ -0.6
SCAMP4-209ENST00000585335 PEF1Q9UBV8 284 aaKnown RBP11.3□□□□□ -0.6
SCAMP4-209ENST00000585335 PAIP2BQ9ULR5 123 aaKnown RBP11.3□□□□□ -0.6
SCAMP4-209ENST00000585335 STRAPQ9Y3F4 350 aaKnown RBP11.3□□□□□ -0.6
SCAMP4-209ENST00000585335 LSM5Q9Y4Y9 91 aaKnown RBP11.3□□□□□ -0.6
SCAMP4-209ENST00000585335 DMRT1Q9Y5R6 373 aa11.3□□□□□ -0.6
SCAMP4-209ENST00000585335 STAB1Q9NY15 2570 aa11.3□□□□□ -0.6
SCAMP4-209ENST00000585335 TENM1Q9UKZ4 2725 aa11.29□□□□□ -0.6
SCAMP4-209ENST00000585335 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.29□□□□□ -0.6
SCAMP4-209ENST00000585335 ANKRD34BA5PLL1 514 aa11.29□□□□□ -0.6
SCAMP4-209ENST00000585335 SCGB2A1O75556 95 aa11.29□□□□□ -0.6
SCAMP4-209ENST00000585335 SIX6O95475 246 aa11.29□□□□□ -0.6
SCAMP4-209ENST00000585335 RLN2P04090 185 aa11.29□□□□□ -0.6
SCAMP4-209ENST00000585335 HSPB1P04792 205 aaKnown RBP11.29□□□□□ -0.6
SCAMP4-209ENST00000585335 ZP3P21754 424 aa11.29□□□□□ -0.6
SCAMP4-209ENST00000585335 OPRK1P41145 380 aa11.29□□□□□ -0.6
SCAMP4-209ENST00000585335 TAS2R30P59541 319 aa11.29□□□□□ -0.6
SCAMP4-209ENST00000585335 DEFB136Q30KP8 78 aa11.29□□□□□ -0.6
SCAMP4-209ENST00000585335 OR11H1Q8NG94 326 aa11.29□□□□□ -0.6
SCAMP4-209ENST00000585335 ATP6V0BQ99437 205 aa11.29□□□□□ -0.6
SCAMP4-209ENST00000585335 C21orf62Q9NYP8 219 aa11.29□□□□□ -0.6
SCAMP4-209ENST00000585335 PSENENQ9NZ42 101 aa11.29□□□□□ -0.6
SCAMP4-209ENST00000585335 MFSD2BA6NFX1 497 aa11.28□□□□□ -0.6
SCAMP4-209ENST00000585335 LINC01619G3V211 115 aa11.28□□□□□ -0.6
SCAMP4-209ENST00000585335 TSPAN15O95858 294 aa11.28□□□□□ -0.6
SCAMP4-209ENST00000585335 MT-CO2P00403 227 aa11.28□□□□□ -0.6
SCAMP4-209ENST00000585335 PET100P0DJ07 73 aa11.28□□□□□ -0.6
SCAMP4-209ENST00000585335 MFAP4P55083 255 aa11.28□□□□□ -0.6
SCAMP4-209ENST00000585335 SPANXN5Q5MJ07 72 aa11.28□□□□□ -0.6
SCAMP4-209ENST00000585335 PVRIGQ6DKI7 326 aa11.28□□□□□ -0.6
SCAMP4-209ENST00000585335 ZNF502Q8TBZ5 544 aa11.28□□□□□ -0.6
SCAMP4-209ENST00000585335 SCARB1Q8WTV0 552 aa11.28□□□□□ -0.6
SCAMP4-209ENST00000585335 RAX2Q96IS3 184 aa11.28□□□□□ -0.6
SCAMP4-209ENST00000585335 SMIM8Q96KF7 97 aa11.28□□□□□ -0.6
SCAMP4-209ENST00000585335 TXN2Q99757 166 aa11.28□□□□□ -0.6
SCAMP4-209ENST00000585335 RCL1Q9Y2P8 373 aaKnown RBP11.28□□□□□ -0.6
SCAMP4-209ENST00000585335 IGHV3-21A0A0B4J1V1 117 aa11.27□□□□□ -0.61
SCAMP4-209ENST00000585335 I3L2K1 104 aa11.27□□□□□ -0.61
SCAMP4-209ENST00000585335 K7EIM0 57 aa11.27□□□□□ -0.61
SCAMP4-209ENST00000585335 K7EPK0 472 aa11.27□□□□□ -0.61
SCAMP4-209ENST00000585335 TSC22D2O75157 780 aa11.27□□□□□ -0.61
SCAMP4-209ENST00000585335 SCAF4O95104 1147 aaKnown RBP11.27□□□□□ -0.61
SCAMP4-209ENST00000585335 IGHV3-23P01764 117 aa11.27□□□□□ -0.61
SCAMP4-209ENST00000585335 SLC25A4P12235 298 aa11.27□□□□□ -0.61
SCAMP4-209ENST00000585335 ARL3P36405 182 aa11.27□□□□□ -0.61
SCAMP4-209ENST00000585335 NPBWR1P48145 328 aa11.27□□□□□ -0.61
SCAMP4-209ENST00000585335 RRAS2P62070 204 aaPredicted RBP11.27□□□□□ -0.61
SCAMP4-209ENST00000585335 Q56UQ5 140 aa11.27□□□□□ -0.61
SCAMP4-209ENST00000585335 ACSM6Q6P461 480 aa11.27□□□□□ -0.61
SCAMP4-209ENST00000585335 CLEC19AQ6UXS0 136 aa11.27□□□□□ -0.61
SCAMP4-209ENST00000585335 UBAC2Q8NBM4 344 aa11.27□□□□□ -0.61
SCAMP4-209ENST00000585335 ASB13Q8WXK3 278 aa11.27□□□□□ -0.61
SCAMP4-209ENST00000585335 S4R3C0 116 aa11.27□□□□□ -0.61
SCAMP4-209ENST00000585335 IGHV4OR15-8A0A075B7B6 117 aa11.26□□□□□ -0.61
SCAMP4-209ENST00000585335 A0A087WW49 117 aa11.26□□□□□ -0.61
SCAMP4-209ENST00000585335 C15orf62A8K5M9 175 aa11.26□□□□□ -0.61
SCAMP4-209ENST00000585335 H3BP45 60 aa11.26□□□□□ -0.61
SCAMP4-209ENST00000585335 GPR183P32249 361 aa11.26□□□□□ -0.61
SCAMP4-209ENST00000585335 BCAP31P51572 246 aa11.26□□□□□ -0.61
SCAMP4-209ENST00000585335 H2BFSP57053 126 aa11.26□□□□□ -0.61
SCAMP4-209ENST00000585335 RAB32Q13637 225 aa11.26□□□□□ -0.61
SCAMP4-209ENST00000585335 FHL3Q13643 280 aa11.26□□□□□ -0.61
SCAMP4-209ENST00000585335 FCN2Q15485 313 aa11.26□□□□□ -0.61
SCAMP4-209ENST00000585335 RPEL1Q2QD12 228 aa11.26□□□□□ -0.61
SCAMP4-209ENST00000585335 PRR31Q5SQ13 230 aa11.26□□□□□ -0.61
SCAMP4-209ENST00000585335 C11orf87Q6NUJ2 197 aa11.26□□□□□ -0.61
SCAMP4-209ENST00000585335 SPSB3Q6PJ21 355 aa11.26□□□□□ -0.61
SCAMP4-209ENST00000585335 ETV3LQ6ZN32 361 aa11.26□□□□□ -0.61
SCAMP4-209ENST00000585335 DCUN1D4Q92564 292 aa11.26□□□□□ -0.61
SCAMP4-209ENST00000585335 BSCL2Q96G97 398 aaPredicted RBP11.26□□□□□ -0.61
SCAMP4-209ENST00000585335 CCDC140Q96MF4 163 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms