RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 CTRB1P17538 263 aa13.34□□□□□ -0.27
TOP3A-220ENST00000585031 TMEM177Q53S58 311 aa13.34□□□□□ -0.27
TOP3A-220ENST00000585031 IGSF11Q5DX21 431 aa13.34□□□□□ -0.27
TOP3A-220ENST00000585031 C10orf55Q5SWW7 151 aa13.34□□□□□ -0.27
TOP3A-220ENST00000585031 CTRB2Q6GPI1 263 aa13.34□□□□□ -0.27
TOP3A-220ENST00000585031 GPHB5Q86YW7 130 aa13.34□□□□□ -0.27
TOP3A-220ENST00000585031 TMEM217Q8N7C4 229 aa13.34□□□□□ -0.27
TOP3A-220ENST00000585031 OR10J5Q8NHC4 309 aa13.34□□□□□ -0.27
TOP3A-220ENST00000585031 CCDC140Q96MF4 163 aa13.34□□□□□ -0.27
TOP3A-220ENST00000585031 TEX13DA0A0J9YY54 714 aaPredicted RBP13.33□□□□□ -0.28
TOP3A-220ENST00000585031 SNAPC5O75971 98 aa13.33□□□□□ -0.28
TOP3A-220ENST00000585031 NFYAP23511 347 aaPredicted RBP13.33□□□□□ -0.28
TOP3A-220ENST00000585031 S100GP29377 79 aa13.33□□□□□ -0.28
TOP3A-220ENST00000585031 FCGR2BP31994 310 aaPredicted RBP13.33□□□□□ -0.28
TOP3A-220ENST00000585031 NKX2-5P52952 324 aaPredicted RBP13.33□□□□□ -0.28
TOP3A-220ENST00000585031 NECAP1Q8NC96 275 aa13.33□□□□□ -0.28
TOP3A-220ENST00000585031 TMEM230Q96A57 120 aa13.33□□□□□ -0.28
TOP3A-220ENST00000585031 OR2A7Q96R45 310 aa13.33□□□□□ -0.28
TOP3A-220ENST00000585031 SDHAF2Q9NX18 166 aa13.33□□□□□ -0.28
TOP3A-220ENST00000585031 KCNIP3Q9Y2W7 256 aa13.33□□□□□ -0.28
TOP3A-220ENST00000585031 TRBV6-7A0A0A0MS04 114 aa13.32□□□□□ -0.28
TOP3A-220ENST00000585031 SHOXO15266 292 aa13.32□□□□□ -0.28
TOP3A-220ENST00000585031 HLA-GP17693 338 aa13.32□□□□□ -0.28
TOP3A-220ENST00000585031 PI3P19957 117 aa13.32□□□□□ -0.28
TOP3A-220ENST00000585031 APOC4P55056 127 aa13.32□□□□□ -0.28
TOP3A-220ENST00000585031 TTC9CQ8N5M4 171 aa13.32□□□□□ -0.28
TOP3A-220ENST00000585031 OR2T35Q8NGX2 323 aa13.32□□□□□ -0.28
TOP3A-220ENST00000585031 RDH8Q9NYR8 311 aa13.32□□□□□ -0.28
TOP3A-220ENST00000585031 APLNQ9ULZ1 77 aa13.32□□□□□ -0.28
TOP3A-220ENST00000585031 CRYM-AS1A6NIL9 109 aa13.31□□□□□ -0.28
TOP3A-220ENST00000585031 A8MWP6 167 aa13.31□□□□□ -0.28
TOP3A-220ENST00000585031 UBE2CO00762 179 aa13.31□□□□□ -0.28
TOP3A-220ENST00000585031 MPPED1O15442 326 aa13.31□□□□□ -0.28
TOP3A-220ENST00000585031 RPL35AP18077 110 aaKnown RBP13.31□□□□□ -0.28
TOP3A-220ENST00000585031 PIGPP57054 158 aa13.31□□□□□ -0.28
TOP3A-220ENST00000585031 TCTAP57738 103 aa13.31□□□□□ -0.28
TOP3A-220ENST00000585031 TAGLNQ01995 201 aaKnown RBP13.31□□□□□ -0.28
TOP3A-220ENST00000585031 CLEC19AQ6UXS0 136 aa13.31□□□□□ -0.28
TOP3A-220ENST00000585031 UNQ9165/PRO28630Q6UXU0 137 aa13.31□□□□□ -0.28
TOP3A-220ENST00000585031 KCTD9Q7L273 389 aa13.31□□□□□ -0.28
TOP3A-220ENST00000585031 SLC5A7Q9GZV3 580 aa13.31□□□□□ -0.28
TOP3A-220ENST00000585031 ZNF430Q9H8G1 570 aaPredicted RBP13.31□□□□□ -0.28
TOP3A-220ENST00000585031 ZNF320A2RRD8 509 aa13.3□□□□□ -0.28
TOP3A-220ENST00000585031 SMLR1H3BR10 107 aa13.3□□□□□ -0.28
TOP3A-220ENST00000585031 GPR31O00270 319 aa13.3□□□□□ -0.28
TOP3A-220ENST00000585031 C8orf88P0DMB2 117 aa13.3□□□□□ -0.28
TOP3A-220ENST00000585031 UBE2KP61086 200 aa13.3□□□□□ -0.28
TOP3A-220ENST00000585031 RND3P61587 244 aa13.3□□□□□ -0.28
TOP3A-220ENST00000585031 FGL1Q08830 312 aa13.3□□□□□ -0.28
TOP3A-220ENST00000585031 ANKRD55Q3KP44 614 aa13.3□□□□□ -0.28
TOP3A-220ENST00000585031 ODF3L2Q3SX64 289 aa13.3□□□□□ -0.28
TOP3A-220ENST00000585031 GSG1LQ6UXU4 331 aa13.3□□□□□ -0.28
TOP3A-220ENST00000585031 H1FOOQ8IZA3 346 aaPredicted RBP13.3□□□□□ -0.28
TOP3A-220ENST00000585031 TEX45Q8NA69 505 aa13.3□□□□□ -0.28
TOP3A-220ENST00000585031 OR1L6Q8NGR2 347 aa13.3□□□□□ -0.28
TOP3A-220ENST00000585031 FANCD2OSQ96PS1 177 aa13.3□□□□□ -0.28
TOP3A-220ENST00000585031 PDCD10Q9BUL8 212 aa13.3□□□□□ -0.28
TOP3A-220ENST00000585031 NAA60Q9H7X0 242 aa13.3□□□□□ -0.28
TOP3A-220ENST00000585031 FBXL17Q9UF56 701 aa13.3□□□□□ -0.28
TOP3A-220ENST00000585031 OR2W1Q9Y3N9 320 aa13.3□□□□□ -0.28
TOP3A-220ENST00000585031 LRP1BQ9NZR2 4599 aa13.3□□□□□ -0.28
TOP3A-220ENST00000585031 KIR2DL5BA0A0G2JN68 375 aa13.29□□□□□ -0.28
TOP3A-220ENST00000585031 KIR2DL5BA0A0G2JPC4 375 aa13.29□□□□□ -0.28
TOP3A-220ENST00000585031 E7EUB6 86 aa13.29□□□□□ -0.28
TOP3A-220ENST00000585031 SIX6O95475 246 aa13.29□□□□□ -0.28
TOP3A-220ENST00000585031 ARL3P36405 182 aa13.29□□□□□ -0.28
TOP3A-220ENST00000585031 SUPT4H1P63272 117 aaKnown RBP13.29□□□□□ -0.28
TOP3A-220ENST00000585031 CYCSP99999 105 aaKnown RBP13.29□□□□□ -0.28
TOP3A-220ENST00000585031 CMTM1Q8IZ96 169 aa13.29□□□□□ -0.28
TOP3A-220ENST00000585031 KIR2DL5AQ8N109 375 aa13.29□□□□□ -0.28
TOP3A-220ENST00000585031 OR2C3Q8N628 320 aa13.29□□□□□ -0.28
TOP3A-220ENST00000585031 STPG3Q8N7X2 389 aa13.29□□□□□ -0.28
TOP3A-220ENST00000585031 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.29□□□□□ -0.28
TOP3A-220ENST00000585031 KIR2DL5BQ8NHK3 375 aa13.29□□□□□ -0.28
TOP3A-220ENST00000585031 SECTM1Q8WVN6 248 aa13.29□□□□□ -0.28
TOP3A-220ENST00000585031 GALNT14Q96FL9 552 aa13.29□□□□□ -0.28
TOP3A-220ENST00000585031 SLC2A9Q9NRM0 540 aa13.29□□□□□ -0.28
TOP3A-220ENST00000585031 COMMD9Q9P000 198 aa13.29□□□□□ -0.28
TOP3A-220ENST00000585031 FBXL7Q9UJT9 491 aa13.29□□□□□ -0.28
TOP3A-220ENST00000585031 PIGBOS1A0A0B4J2F0 54 aa13.28□□□□□ -0.28
TOP3A-220ENST00000585031 A0A1B0GW64 132 aa13.28□□□□□ -0.28
TOP3A-220ENST00000585031 DBX1A6NMT0 343 aa13.28□□□□□ -0.28
TOP3A-220ENST00000585031 TEX22C9J3V5 150 aa13.28□□□□□ -0.28
TOP3A-220ENST00000585031 C4BPBP20851 252 aa13.28□□□□□ -0.28
TOP3A-220ENST00000585031 H2BFSP57053 126 aa13.28□□□□□ -0.28
TOP3A-220ENST00000585031 SRPXP78539 464 aa13.28□□□□□ -0.28
TOP3A-220ENST00000585031 ZNF585BQ52M93 769 aa13.28□□□□□ -0.28
TOP3A-220ENST00000585031 PHLDA2Q53GA4 152 aa13.28□□□□□ -0.28
TOP3A-220ENST00000585031 OR2D2Q9H210 308 aa13.28□□□□□ -0.28
TOP3A-220ENST00000585031 TRAV25A0A0B4J276 109 aa13.27□□□□□ -0.29
TOP3A-220ENST00000585031 C5orf51A6NDU8 294 aa13.27□□□□□ -0.29
TOP3A-220ENST00000585031 LINC00473A8K010 186 aa13.27□□□□□ -0.29
TOP3A-220ENST00000585031 FAM25EA8MYX2 175 aa13.27□□□□□ -0.29
TOP3A-220ENST00000585031 RTL8CO15255 209 aa13.27□□□□□ -0.29
TOP3A-220ENST00000585031 IFNA21P01568 189 aa13.27□□□□□ -0.29
TOP3A-220ENST00000585031 IL6RP08887 468 aaPredicted RBP13.27□□□□□ -0.29
TOP3A-220ENST00000585031 C11orf45Q8TAV5 145 aa13.27□□□□□ -0.29
TOP3A-220ENST00000585031 C2CD4CQ8TF44 421 aa13.27□□□□□ -0.29
TOP3A-220ENST00000585031 MAP6D1Q9H9H5 199 aa13.27□□□□□ -0.29
TOP3A-220ENST00000585031 PLA2G2EQ9NZK7 142 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms