RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 MUC21Q5SSG8 566 aa8.33□□□□□ -1.08
RFFL-212ENST00000584655 NUP37Q8NFH4 326 aa8.33□□□□□ -1.08
RFFL-212ENST00000584655 ITLN2Q8WWU7 325 aaPredicted RBP8.33□□□□□ -1.08
RFFL-212ENST00000584655 TMEM147Q9BVK8 224 aa8.33□□□□□ -1.08
RFFL-212ENST00000584655 TMEM133Q9H2Q1 129 aa8.33□□□□□ -1.08
RFFL-212ENST00000584655 MRPL36Q9P0J6 103 aaKnown RBP8.33□□□□□ -1.08
RFFL-212ENST00000584655 TEX50A0A1B0GTY4 177 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 TRGC2P03986 189 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 HSPE1P61604 102 aaKnown RBP8.32□□□□□ -1.08
RFFL-212ENST00000584655 CDPF1Q6NVV7 123 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 ZNF66Q6ZN08 573 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 RAB39BQ96DA2 213 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 PARP11Q9NR21 331 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 COA4Q9NYJ1 87 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 TGIF2-C20orf24A0A0A6YYL0 155 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 COLCA2A8K830 154 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 G0S2P27469 103 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 SUMO1P63165 101 aaKnown RBP8.32□□□□□ -1.08
RFFL-212ENST00000584655 ERHP84090 104 aaKnown RBP8.32□□□□□ -1.08
RFFL-212ENST00000584655 HTD2P86397 168 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 HEPN1Q6WQI6 88 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 SSUH2Q9Y2M2 353 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 TRAV40A0A0B4J280 105 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 FAM120AOSQ5T036 256 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 STPG3Q8N7X2 389 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 SAT2Q96F10 170 aaPredicted RBP8.32□□□□□ -1.08
RFFL-212ENST00000584655 SLC25A33Q9BSK2 321 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 SLC35B3Q9H1N7 401 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 AP4M1O00189 453 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 FXYD3Q14802 87 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 NEIL1Q96FI4 390 aaPredicted RBP8.32□□□□□ -1.08
RFFL-212ENST00000584655 GINS3Q9BRX5 216 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 CLEC7AQ9BXN2 247 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 CBLN4Q9NTU7 201 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 RYDENQ9NUL5 291 aaKnown RBP8.32□□□□□ -1.08
RFFL-212ENST00000584655 GAR1Q9NY12 217 aaKnown RBP8.32□□□□□ -1.08
RFFL-212ENST00000584655 HSPB7Q9UBY9 170 aa8.32□□□□□ -1.08
RFFL-212ENST00000584655 TENM4Q6N022 2769 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 H0YJW9 148 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 NDUFA2O43678 99 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 IGHV3-11P01762 117 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 S100A8P05109 93 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 SPCS3P61009 180 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 OR5I1Q13606 314 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 MORN5Q5VZ52 161 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 ZNF439Q8NDP4 499 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 TMEM37Q8WXS4 190 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 LSM10Q969L4 123 aaKnown RBP8.31□□□□□ -1.08
RFFL-212ENST00000584655 SMIM8Q96KF7 97 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 CCL19Q99731 98 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 MDFIC2A0A1B0GVS7 189 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 C11orf94C9JXX5 98 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 HTR1DP28221 377 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 RAB5CP51148 216 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 RPL11P62913 178 aaKnown RBP8.31□□□□□ -1.08
RFFL-212ENST00000584655 WT1-ASQ06250 92 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 TREML4Q6UXN2 200 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 VMO1Q7Z5L0 202 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 OR4X1Q8NH49 305 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 TRBV6-6A0A0A6YYG2 114 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 KHDC1LQ5JSQ8 128 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 SPSB3Q6PJ21 355 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 SLC25A48Q6ZT89 311 aaKnown RBP8.31□□□□□ -1.08
RFFL-212ENST00000584655 DYNAPQ8N1N2 210 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 TMEM170AQ8WVE7 144 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 ELOVL1Q9BW60 279 aa8.31□□□□□ -1.08
RFFL-212ENST00000584655 SETXQ7Z333 2677 aaKnown RBP8.31□□□□□ -1.08
RFFL-212ENST00000584655 FGF16O43320 207 aa8.3□□□□□ -1.08
RFFL-212ENST00000584655 OR2J3O76001 311 aa8.3□□□□□ -1.08
RFFL-212ENST00000584655 CA1P00915 261 aaPredicted RBP8.3□□□□□ -1.08
RFFL-212ENST00000584655 LINC00869P0C866 280 aa8.3□□□□□ -1.08
RFFL-212ENST00000584655 PSMB3P49720 205 aa8.3□□□□□ -1.08
RFFL-212ENST00000584655 VMA21Q3ZAQ7 101 aa8.3□□□□□ -1.08
RFFL-212ENST00000584655 NABP2Q9BQ15 211 aa8.3□□□□□ -1.08
RFFL-212ENST00000584655 ACTR3CQ9C0K3 210 aaPredicted RBP8.3□□□□□ -1.08
RFFL-212ENST00000584655 A0A1B0GV90 55 aa8.3□□□□□ -1.08
RFFL-212ENST00000584655 LIPFP07098 398 aa8.3□□□□□ -1.08
RFFL-212ENST00000584655 KRTAP10-9P60411 292 aa8.3□□□□□ -1.08
RFFL-212ENST00000584655 ZNF329Q86UD4 541 aa8.3□□□□□ -1.08
RFFL-212ENST00000584655 C15orf54Q8N8G6 183 aa8.3□□□□□ -1.08
RFFL-212ENST00000584655 OR4C13Q8NGP0 309 aa8.3□□□□□ -1.08
RFFL-212ENST00000584655 SLC35E1Q96K37 410 aa8.3□□□□□ -1.08
RFFL-212ENST00000584655 MGST2Q99735 147 aa8.3□□□□□ -1.08
RFFL-212ENST00000584655 WASHC3Q9Y3C0 194 aa8.3□□□□□ -1.08
RFFL-212ENST00000584655 PRRX1P54821 245 aa8.3□□□□□ -1.08
RFFL-212ENST00000584655 GNG5P63218 68 aa8.3□□□□□ -1.08
RFFL-212ENST00000584655 LRRC75BQ2VPJ9 315 aa8.3□□□□□ -1.08
RFFL-212ENST00000584655 FAM222BQ8WU58 562 aa8.3□□□□□ -1.08
RFFL-212ENST00000584655 NUDT19A8MXV4 375 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 G3V318 75 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 F2RL2O00254 374 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 RPL27AP46776 148 aaKnown RBP8.29□□□□□ -1.08
RFFL-212ENST00000584655 Q6ZS49 121 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 CARHSP1Q9Y2V2 147 aaKnown RBP8.29□□□□□ -1.08
RFFL-212ENST00000584655 IGHV1-3A0A0C4DH29 117 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 SCO2A0A1W2PP80 73 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 C15orf61A6NNL5 157 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 SLC17A3O00476 420 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 IL6RP08887 468 aaPredicted RBP8.29□□□□□ -1.08
RFFL-212ENST00000584655 RAB31Q13636 194 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms