RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 ARL14EPLP0DKL9 152 aa11.14□□□□□ -0.63
SRSF1-205ENST00000582730 GRNP28799 593 aaKnown RBP11.14□□□□□ -0.63
SRSF1-205ENST00000582730 ATP5G3P48201 142 aa11.14□□□□□ -0.63
SRSF1-205ENST00000582730 TMEM30BQ3MIR4 351 aa11.14□□□□□ -0.63
SRSF1-205ENST00000582730 KCNIP4Q6PIL6 250 aa11.14□□□□□ -0.63
SRSF1-205ENST00000582730 TEPPQ6URK8 271 aa11.14□□□□□ -0.63
SRSF1-205ENST00000582730 MOB3BQ86TA1 216 aa11.14□□□□□ -0.63
SRSF1-205ENST00000582730 AURKAIP1Q9NWT8 199 aaPredicted RBP11.14□□□□□ -0.63
SRSF1-205ENST00000582730 TRAPPC1Q9Y5R8 145 aa11.14□□□□□ -0.63
SRSF1-205ENST00000582730 ABCA4P78363 2273 aa11.14□□□□□ -0.63
SRSF1-205ENST00000582730 IGHV1-69-2A0A0G2JMI3 117 aa11.13□□□□□ -0.63
SRSF1-205ENST00000582730 A0A0U1RQK1 487 aa11.13□□□□□ -0.63
SRSF1-205ENST00000582730 ZNF320A2RRD8 509 aa11.13□□□□□ -0.63
SRSF1-205ENST00000582730 IL6RP08887 468 aaPredicted RBP11.13□□□□□ -0.63
SRSF1-205ENST00000582730 COL8A2P25067 703 aa11.13□□□□□ -0.63
SRSF1-205ENST00000582730 RPL15P61313 204 aaKnown RBP11.13□□□□□ -0.63
SRSF1-205ENST00000582730 M0QZK8 103 aa11.13□□□□□ -0.63
SRSF1-205ENST00000582730 CCL21O00585 134 aa11.13□□□□□ -0.63
SRSF1-205ENST00000582730 ACTL6BO94805 426 aa11.13□□□□□ -0.63
SRSF1-205ENST00000582730 IGFBP2P18065 325 aa11.13□□□□□ -0.63
SRSF1-205ENST00000582730 DLX1P56177 255 aa11.13□□□□□ -0.63
SRSF1-205ENST00000582730 RAB31Q13636 194 aa11.13□□□□□ -0.63
SRSF1-205ENST00000582730 SSX8Q7RTT4 187 aa11.13□□□□□ -0.63
SRSF1-205ENST00000582730 STPG3Q8N7X2 389 aa11.13□□□□□ -0.63
SRSF1-205ENST00000582730 OR10W1Q8NGF6 305 aa11.13□□□□□ -0.63
SRSF1-205ENST00000582730 COMMD5Q9GZQ3 224 aa11.13□□□□□ -0.63
SRSF1-205ENST00000582730 NPPCP23582 126 aa11.13□□□□□ -0.63
SRSF1-205ENST00000582730 APOBEC3AP31941 199 aaPredicted RBP11.13□□□□□ -0.63
SRSF1-205ENST00000582730 LCN2P80188 198 aa11.13□□□□□ -0.63
SRSF1-205ENST00000582730 TDRG1Q3Y452 100 aa11.13□□□□□ -0.63
SRSF1-205ENST00000582730 MSRB2Q9Y3D2 182 aa11.13□□□□□ -0.63
SRSF1-205ENST00000582730 TEX50A0A1B0GTY4 177 aa11.12□□□□□ -0.63
SRSF1-205ENST00000582730 PRCDQ00LT1 54 aa11.12□□□□□ -0.63
SRSF1-205ENST00000582730 ZNF833PQ6ZTB9 187 aa11.12□□□□□ -0.63
SRSF1-205ENST00000582730 FLYWCH2Q96CP2 140 aaKnown RBP11.12□□□□□ -0.63
SRSF1-205ENST00000582730 CBY1Q9Y3M2 126 aa11.12□□□□□ -0.63
SRSF1-205ENST00000582730 RELNP78509 3460 aa11.12□□□□□ -0.63
SRSF1-205ENST00000582730 COL6A6A6NMZ7 2263 aa11.12□□□□□ -0.63
SRSF1-205ENST00000582730 ANKHD1Q8IWZ3 2542 aaKnown RBP11.11□□□□□ -0.63
SRSF1-205ENST00000582730 IGHV3-72A0A0B4J1Y9 119 aa11.11□□□□□ -0.63
SRSF1-205ENST00000582730 H0YJW9 148 aa11.11□□□□□ -0.63
SRSF1-205ENST00000582730 ENSAO43768 121 aaKnown RBP11.11□□□□□ -0.63
SRSF1-205ENST00000582730 VENTXO95231 258 aa11.11□□□□□ -0.63
SRSF1-205ENST00000582730 LOXP28300 417 aaPredicted RBP11.11□□□□□ -0.63
SRSF1-205ENST00000582730 POU2AF1Q16633 256 aa11.11□□□□□ -0.63
SRSF1-205ENST00000582730 SPATA31B1PQ5VZV4 182 aa11.11□□□□□ -0.63
SRSF1-205ENST00000582730 IMMP2LQ96T52 175 aa11.11□□□□□ -0.63
SRSF1-205ENST00000582730 KCNIP2Q9NS61 270 aa11.11□□□□□ -0.63
SRSF1-205ENST00000582730 GAGE1Q13065 139 aa11.11□□□□□ -0.63
SRSF1-205ENST00000582730 TOMM20LQ6UXN7 152 aa11.11□□□□□ -0.63
SRSF1-205ENST00000582730 SEPSECSQ9HD40 501 aaKnown RBP11.11□□□□□ -0.63
SRSF1-205ENST00000582730 NDUFB4O95168 129 aa11.11□□□□□ -0.63
SRSF1-205ENST00000582730 MLANAQ16655 118 aa11.11□□□□□ -0.63
SRSF1-205ENST00000582730 OSR1Q8TAX0 266 aaPredicted RBP11.11□□□□□ -0.63
SRSF1-205ENST00000582730 C1orf159Q96HA4 380 aa11.11□□□□□ -0.63
SRSF1-205ENST00000582730 LSM4Q9Y4Z0 139 aaKnown RBP11.11□□□□□ -0.63
SRSF1-205ENST00000582730 SPTBN4Q9H254 2564 aa11.11□□□□□ -0.63
SRSF1-205ENST00000582730 GRIFINA4D1Z8 144 aa11.1□□□□□ -0.63
SRSF1-205ENST00000582730 B9A039 149 aa11.1□□□□□ -0.63
SRSF1-205ENST00000582730 GATA2P23769 480 aaPredicted RBP11.1□□□□□ -0.63
SRSF1-205ENST00000582730 C10orf55Q5SWW7 151 aa11.1□□□□□ -0.63
SRSF1-205ENST00000582730 TMEM144Q7Z5S9 345 aa11.1□□□□□ -0.63
SRSF1-205ENST00000582730 LINC01551Q86U37 167 aa11.1□□□□□ -0.63
SRSF1-205ENST00000582730 MUC15Q8N387 334 aa11.1□□□□□ -0.63
SRSF1-205ENST00000582730 DERL1Q9BUN8 251 aa11.1□□□□□ -0.63
SRSF1-205ENST00000582730 ZNF257Q9Y2Q1 563 aa11.1□□□□□ -0.63
SRSF1-205ENST00000582730 CXorf1O96002 111 aa11.1□□□□□ -0.63
SRSF1-205ENST00000582730 RPL8P62917 257 aaKnown RBP11.1□□□□□ -0.63
SRSF1-205ENST00000582730 EFNB3Q15768 340 aa11.1□□□□□ -0.63
SRSF1-205ENST00000582730 OR4P4Q8NGL7 312 aa11.1□□□□□ -0.63
SRSF1-205ENST00000582730 BET1LQ9NYM9 111 aa11.1□□□□□ -0.63
SRSF1-205ENST00000582730 HNF1AP20823 631 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 BRS3P32247 399 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 BATFQ16520 125 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 CMTM2Q8TAZ6 248 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 RAB1CQ92928 201 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 MIEN1Q9BRT3 115 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 LPAR2Q9HBW0 351 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 PGPEP1LA6NFU8 196 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 C1QTNF9P0C862 333 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 STAG3L2P0CL84 134 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 STAG3L3P0CL85 134 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 RHOBP62745 196 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 GNB1P62873 340 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 Q6ZWC4 215 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 OR5B3Q8NH48 314 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 IGHV3-48P01763 117 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 ADMP35318 185 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 PCP4P48539 62 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 OR5AN1Q8NGI8 311 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 OR4C13Q8NGP0 309 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 NABP2Q9BQ15 211 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 C20orf144Q9BQM9 153 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 PAM16Q9Y3D7 125 aa11.09□□□□□ -0.63
SRSF1-205ENST00000582730 SLC25A17O43808 307 aa11.08□□□□□ -0.64
SRSF1-205ENST00000582730 PDE6DO43924 150 aa11.08□□□□□ -0.64
SRSF1-205ENST00000582730 FOXH1O75593 365 aa11.08□□□□□ -0.64
SRSF1-205ENST00000582730 LINC00614P0C842 121 aa11.08□□□□□ -0.64
SRSF1-205ENST00000582730 CA7P43166 264 aa11.08□□□□□ -0.64
SRSF1-205ENST00000582730 ERHP84090 104 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms