RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 VN1R17PQ8TDU5 208 aa12.56□□□□□ -0.4
RNF43-206ENST00000582293 CXorf58Q96LI9 332 aa12.56□□□□□ -0.4
RNF43-206ENST00000582293 RBKSQ9H477 322 aa12.56□□□□□ -0.4
RNF43-206ENST00000582293 TRBV7-1A0A0A6YYK4 115 aa12.55□□□□□ -0.4
RNF43-206ENST00000582293 PIGBOS1A0A0B4J2F0 54 aa12.55□□□□□ -0.4
RNF43-206ENST00000582293 OVOL1O14753 267 aa12.55□□□□□ -0.4
RNF43-206ENST00000582293 WIPF1O43516 503 aa12.55□□□□□ -0.4
RNF43-206ENST00000582293 SPNP16150 400 aa12.55□□□□□ -0.4
RNF43-206ENST00000582293 ZP3P21754 424 aa12.55□□□□□ -0.4
RNF43-206ENST00000582293 IL34Q6ZMJ4 242 aa12.55□□□□□ -0.4
RNF43-206ENST00000582293 OR1L6Q8NGR2 347 aa12.55□□□□□ -0.4
RNF43-206ENST00000582293 OR1S1Q8NH92 325 aa12.55□□□□□ -0.4
RNF43-206ENST00000582293 COQ8AQ8NI60 647 aa12.55□□□□□ -0.4
RNF43-206ENST00000582293 ENKURQ8TC29 256 aa12.55□□□□□ -0.4
RNF43-206ENST00000582293 ZNF431Q8TF32 576 aaPredicted RBP12.55□□□□□ -0.4
RNF43-206ENST00000582293 THYN1Q9P016 225 aa12.55□□□□□ -0.4
RNF43-206ENST00000582293 NOTCH1P46531 2555 aa12.55□□□□□ -0.4
RNF43-206ENST00000582293 CEBPZOSA8MTT3 80 aa12.54□□□□□ -0.4
RNF43-206ENST00000582293 MT-CO2P00403 227 aa12.54□□□□□ -0.4
RNF43-206ENST00000582293 CLEC3BP05452 202 aa12.54□□□□□ -0.4
RNF43-206ENST00000582293 SYNJ2BPP57105 145 aa12.54□□□□□ -0.4
RNF43-206ENST00000582293 KRTAP10-11P60412 298 aa12.54□□□□□ -0.4
RNF43-206ENST00000582293 ACSM6Q6P461 480 aa12.54□□□□□ -0.4
RNF43-206ENST00000582293 MISP3Q96FF7 219 aa12.54□□□□□ -0.4
RNF43-206ENST00000582293 OR10C1Q96KK4 312 aa12.54□□□□□ -0.4
RNF43-206ENST00000582293 FNDC4Q9H6D8 234 aaPredicted RBP12.54□□□□□ -0.4
RNF43-206ENST00000582293 MRPL36Q9P0J6 103 aaKnown RBP12.54□□□□□ -0.4
RNF43-206ENST00000582293 NOTCH3Q9UM47 2321 aa12.54□□□□□ -0.4
RNF43-206ENST00000582293 CYB5BO43169 146 aa12.53□□□□□ -0.4
RNF43-206ENST00000582293 OR2C1O95371 312 aa12.53□□□□□ -0.4
RNF43-206ENST00000582293 IGHV3-48P01763 117 aa12.53□□□□□ -0.4
RNF43-206ENST00000582293 IL5P05113 134 aa12.53□□□□□ -0.4
RNF43-206ENST00000582293 GPR183P32249 361 aa12.53□□□□□ -0.4
RNF43-206ENST00000582293 ARL3P36405 182 aa12.53□□□□□ -0.4
RNF43-206ENST00000582293 SNCAP37840 140 aa12.53□□□□□ -0.4
RNF43-206ENST00000582293 MLANAQ16655 118 aa12.53□□□□□ -0.4
RNF43-206ENST00000582293 OR4D5Q8NGN0 318 aa12.53□□□□□ -0.4
RNF43-206ENST00000582293 DTD1Q8TEA8 209 aa12.53□□□□□ -0.4
RNF43-206ENST00000582293 MCRIP2Q9BUT9 160 aaKnown RBP12.53□□□□□ -0.4
RNF43-206ENST00000582293 ENY2Q9NPA8 101 aa12.53□□□□□ -0.4
RNF43-206ENST00000582293 HEYLQ9NQ87 328 aaPredicted RBP12.53□□□□□ -0.4
RNF43-206ENST00000582293 ZC4H2Q9NQZ6 224 aa12.53□□□□□ -0.4
RNF43-206ENST00000582293 C21orf62Q9NYP8 219 aa12.53□□□□□ -0.4
RNF43-206ENST00000582293 SEC14L6B5MCN3 397 aa12.52□□□□□ -0.41
RNF43-206ENST00000582293 CCSO14618 274 aa12.52□□□□□ -0.41
RNF43-206ENST00000582293 GGCTO75223 188 aaKnown RBP12.52□□□□□ -0.41
RNF43-206ENST00000582293 EDN2P20800 178 aa12.52□□□□□ -0.41
RNF43-206ENST00000582293 ADMP35318 185 aa12.52□□□□□ -0.41
RNF43-206ENST00000582293 HTR2BP41595 481 aa12.52□□□□□ -0.41
RNF43-206ENST00000582293 EGFEM1PQ0D2K5 195 aa12.52□□□□□ -0.41
RNF43-206ENST00000582293 RPEL1Q2QD12 228 aa12.52□□□□□ -0.41
RNF43-206ENST00000582293 C2orf83Q53S99 150 aa12.52□□□□□ -0.41
RNF43-206ENST00000582293 FAM209BQ5JX69 171 aa12.52□□□□□ -0.41
RNF43-206ENST00000582293 SLC24A4Q8NFF2 622 aa12.52□□□□□ -0.41
RNF43-206ENST00000582293 PINX1Q96BK5 328 aaKnown RBP12.52□□□□□ -0.41
RNF43-206ENST00000582293 MARVELD1Q9BSK0 173 aa12.52□□□□□ -0.41
RNF43-206ENST00000582293 CHRDL1Q9BU40 450 aa12.52□□□□□ -0.41
RNF43-206ENST00000582293 OR2T8A6NH00 312 aa12.51□□□□□ -0.41
RNF43-206ENST00000582293 FAM90A26D6RGX4 464 aa12.51□□□□□ -0.41
RNF43-206ENST00000582293 TGOLN2O43493 480 aa12.51□□□□□ -0.41
RNF43-206ENST00000582293 FCGR2BP31994 310 aaPredicted RBP12.51□□□□□ -0.41
RNF43-206ENST00000582293 DEFA1P59665 94 aa12.51□□□□□ -0.41
RNF43-206ENST00000582293 DEFA3P59666 94 aa12.51□□□□□ -0.41
RNF43-206ENST00000582293 ID3Q02535 119 aa12.51□□□□□ -0.41
RNF43-206ENST00000582293 ADAMTSL5Q6ZMM2 481 aa12.51□□□□□ -0.41
RNF43-206ENST00000582293 C12orf45Q8N5I9 185 aaPredicted RBP12.51□□□□□ -0.41
RNF43-206ENST00000582293 MAGT1Q9H0U3 335 aa12.51□□□□□ -0.41
RNF43-206ENST00000582293 CACFD1Q9UGQ2 172 aa12.51□□□□□ -0.41
RNF43-206ENST00000582293 INMT-MINDY4F8WBC2 141 aa12.5□□□□□ -0.41
RNF43-206ENST00000582293 PRB2P02812 416 aaPredicted RBP12.5□□□□□ -0.41
RNF43-206ENST00000582293 CTSGP08311 255 aa12.5□□□□□ -0.41
RNF43-206ENST00000582293 IAPPP10997 89 aa12.5□□□□□ -0.41
RNF43-206ENST00000582293 SUB1P53999 127 aaKnown RBP eCLIP12.5□□□□□ -0.41
RNF43-206ENST00000582293 C9orf66Q5T8R8 295 aa12.5□□□□□ -0.41
RNF43-206ENST00000582293 PLET1Q6UQ28 207 aa12.5□□□□□ -0.41
RNF43-206ENST00000582293 UNQ9165/PRO28630Q6UXU0 137 aa12.5□□□□□ -0.41
RNF43-206ENST00000582293 GPHB5Q86YW7 130 aa12.5□□□□□ -0.41
RNF43-206ENST00000582293 ZBTB8BQ8NAP8 495 aaPredicted RBP12.5□□□□□ -0.41
RNF43-206ENST00000582293 OR9G4Q8NGQ1 327 aa12.5□□□□□ -0.41
RNF43-206ENST00000582293 ATP6V0BQ99437 205 aa12.5□□□□□ -0.41
RNF43-206ENST00000582293 IGHV3-35A0A0C4DH35 117 aa12.49□□□□□ -0.41
RNF43-206ENST00000582293 TMEM50AO95807 157 aa12.49□□□□□ -0.41
RNF43-206ENST00000582293 IFNA21P01568 189 aa12.49□□□□□ -0.41
RNF43-206ENST00000582293 CSN3P07498 182 aa12.49□□□□□ -0.41
RNF43-206ENST00000582293 NPY1RP25929 384 aa12.49□□□□□ -0.41
RNF43-206ENST00000582293 DEFA6Q01524 100 aa12.49□□□□□ -0.41
RNF43-206ENST00000582293 IAH1Q2TAA2 248 aaPredicted RBP12.49□□□□□ -0.41
RNF43-206ENST00000582293 HAPLN4Q86UW8 402 aa12.49□□□□□ -0.41
RNF43-206ENST00000582293 UBAC2Q8NBM4 344 aa12.49□□□□□ -0.41
RNF43-206ENST00000582293 BSCL2Q96G97 398 aaPredicted RBP12.49□□□□□ -0.41
RNF43-206ENST00000582293 ZNF436Q9C0F3 470 aaPredicted RBP12.49□□□□□ -0.41
RNF43-206ENST00000582293 HIPK2Q9H2X6 1198 aa12.49□□□□□ -0.41
RNF43-206ENST00000582293 C15orf62A8K5M9 175 aa12.48□□□□□ -0.41
RNF43-206ENST00000582293 LGALS9O00182 355 aa12.48□□□□□ -0.41
RNF43-206ENST00000582293 CORTO00230 105 aa12.48□□□□□ -0.41
RNF43-206ENST00000582293 SYNGR2O43760 224 aa12.48□□□□□ -0.41
RNF43-206ENST00000582293 MFAP4P55083 255 aa12.48□□□□□ -0.41
RNF43-206ENST00000582293 POLR2GP62487 172 aaKnown RBP eCLIP12.48□□□□□ -0.41
RNF43-206ENST00000582293 Q56UQ5 140 aa12.48□□□□□ -0.41
RNF43-206ENST00000582293 REC114Q7Z4M0 266 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms