RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 CCDC140Q96MF4 163 aa15.82■□□□□ 0.12
CCDC42-203ENST00000581598 SRSF8Q9BRL6 282 aaKnown RBP15.82■□□□□ 0.12
CCDC42-203ENST00000581598 EDA2RQ9HAV5 297 aa15.82■□□□□ 0.12
CCDC42-203ENST00000581598 IGLV11-55A0A075B6I3 123 aa15.81■□□□□ 0.12
CCDC42-203ENST00000581598 C2orf70A6NJV1 201 aa15.81■□□□□ 0.12
CCDC42-203ENST00000581598 NDUFB8O95169 186 aa15.81■□□□□ 0.12
CCDC42-203ENST00000581598 P0C879 139 aa15.81■□□□□ 0.12
CCDC42-203ENST00000581598 DEFB114Q30KQ6 69 aa15.81■□□□□ 0.12
CCDC42-203ENST00000581598 CD300EQ496F6 205 aaPredicted RBP15.81■□□□□ 0.12
CCDC42-203ENST00000581598 TMEM268Q5VZI3 342 aa15.81■□□□□ 0.12
CCDC42-203ENST00000581598 C19orf35Q6ZS72 473 aa15.81■□□□□ 0.12
CCDC42-203ENST00000581598 EEF1AKMT3Q96AZ1 226 aa15.81■□□□□ 0.12
CCDC42-203ENST00000581598 SEC22AQ96IW7 307 aa15.81■□□□□ 0.12
CCDC42-203ENST00000581598 TUBA4BQ9H853 241 aa15.81■□□□□ 0.12
CCDC42-203ENST00000581598 ZC4H2Q9NQZ6 224 aa15.81■□□□□ 0.12
CCDC42-203ENST00000581598 TECRQ9NZ01 308 aaKnown RBP15.81■□□□□ 0.12
CCDC42-203ENST00000581598 ZNF785A8K8V0 405 aa15.8■□□□□ 0.12
CCDC42-203ENST00000581598 UPK2O00526 184 aa15.8■□□□□ 0.12
CCDC42-203ENST00000581598 IGKV1-5P01602 117 aa15.8■□□□□ 0.12
CCDC42-203ENST00000581598 LYL1P12980 280 aa15.8■□□□□ 0.12
CCDC42-203ENST00000581598 OR2B8PP59922 312 aa15.8■□□□□ 0.12
CCDC42-203ENST00000581598 LINC00322Q6ZN03 302 aaPredicted RBP15.8■□□□□ 0.12
CCDC42-203ENST00000581598 SLC35G3Q8N808 338 aa15.8■□□□□ 0.12
CCDC42-203ENST00000581598 DYNLRB2Q8TF09 96 aa15.8■□□□□ 0.12
CCDC42-203ENST00000581598 ATG12O94817 140 aa15.79■□□□□ 0.12
CCDC42-203ENST00000581598 OR2C1O95371 312 aa15.79■□□□□ 0.12
CCDC42-203ENST00000581598 FOLR2P14207 255 aa15.79■□□□□ 0.12
CCDC42-203ENST00000581598 MYOD1P15172 320 aa15.79■□□□□ 0.12
CCDC42-203ENST00000581598 ARL3P36405 182 aa15.79■□□□□ 0.12
CCDC42-203ENST00000581598 THOC7Q6I9Y2 204 aaKnown RBP15.79■□□□□ 0.12
CCDC42-203ENST00000581598 CLEC19AQ6UXS0 136 aa15.79■□□□□ 0.12
CCDC42-203ENST00000581598 LSM10Q969L4 123 aaKnown RBP15.79■□□□□ 0.12
CCDC42-203ENST00000581598 CXorf58Q96LI9 332 aa15.79■□□□□ 0.12
CCDC42-203ENST00000581598 TRBV7-1A0A0A6YYK4 115 aa15.78■□□□□ 0.12
CCDC42-203ENST00000581598 IGLC7A0M8Q6 106 aa15.78■□□□□ 0.12
CCDC42-203ENST00000581598 MARCH11A6NNE9 402 aa15.78■□□□□ 0.12
CCDC42-203ENST00000581598 A8MWP6 167 aa15.78■□□□□ 0.12
CCDC42-203ENST00000581598 DEFA4P12838 97 aa15.78■□□□□ 0.12
CCDC42-203ENST00000581598 G6PCP35575 357 aa15.78■□□□□ 0.12
CCDC42-203ENST00000581598 CD81P60033 236 aa15.78■□□□□ 0.12
CCDC42-203ENST00000581598 ERVK-16P61578 105 aa15.78■□□□□ 0.12
CCDC42-203ENST00000581598 NMSQ5H8A3 153 aa15.78■□□□□ 0.12
CCDC42-203ENST00000581598 LYZL2Q7Z4W2 148 aa15.78■□□□□ 0.12
CCDC42-203ENST00000581598 NEURL2Q9BR09 285 aa15.78■□□□□ 0.12
CCDC42-203ENST00000581598 COMMD5Q9GZQ3 224 aa15.78■□□□□ 0.12
CCDC42-203ENST00000581598 TMEM140Q9NV12 185 aa15.78■□□□□ 0.12
CCDC42-203ENST00000581598 TRAV3A0A0B4J244 114 aa15.77■□□□□ 0.12
CCDC42-203ENST00000581598 SSNA1O43805 119 aa15.77■□□□□ 0.12
CCDC42-203ENST00000581598 KRASP01116 189 aa15.77■□□□□ 0.12
CCDC42-203ENST00000581598 FAM106AQ4KMX7 169 aa15.77■□□□□ 0.12
CCDC42-203ENST00000581598 FAM219AQ8IW50 185 aa15.77■□□□□ 0.12
CCDC42-203ENST00000581598 TMED3Q9Y3Q3 217 aa15.77■□□□□ 0.12
CCDC42-203ENST00000581598 A0A0G2JRQ6 117 aa15.76■□□□□ 0.11
CCDC42-203ENST00000581598 A0A1B0GVG6 124 aa15.76■□□□□ 0.11
CCDC42-203ENST00000581598 ADAP1O75689 374 aa15.76■□□□□ 0.11
CCDC42-203ENST00000581598 IGHV3-23P01764 117 aa15.76■□□□□ 0.11
CCDC42-203ENST00000581598 REG1AP05451 166 aa15.76■□□□□ 0.11
CCDC42-203ENST00000581598 CBLN1P23435 193 aa15.76■□□□□ 0.11
CCDC42-203ENST00000581598 AKR1C2P52895 323 aa15.76■□□□□ 0.11
CCDC42-203ENST00000581598 RRAS2P62070 204 aaPredicted RBP15.76■□□□□ 0.11
CCDC42-203ENST00000581598 GGNBP1Q5YKI7 109 aa15.76■□□□□ 0.11
CCDC42-203ENST00000581598 HSD17B13Q7Z5P4 300 aaPredicted RBP15.76■□□□□ 0.11
CCDC42-203ENST00000581598 DMBX1Q8NFW5 382 aa15.76■□□□□ 0.11
CCDC42-203ENST00000581598 QTRT1Q9BXR0 403 aaKnown RBP15.76■□□□□ 0.11
CCDC42-203ENST00000581598 MED28Q9H204 178 aa15.76■□□□□ 0.11
CCDC42-203ENST00000581598 THYN1Q9P016 225 aa15.76■□□□□ 0.11
CCDC42-203ENST00000581598 MFSD2BA6NFX1 497 aa15.75■□□□□ 0.11
CCDC42-203ENST00000581598 HOXB5P09067 269 aa15.75■□□□□ 0.11
CCDC42-203ENST00000581598 CD7P09564 240 aa15.75■□□□□ 0.11
CCDC42-203ENST00000581598 SULT1A3P0DMM9 295 aa15.75■□□□□ 0.11
CCDC42-203ENST00000581598 SULT1A4P0DMN0 295 aa15.75■□□□□ 0.11
CCDC42-203ENST00000581598 EDN2P20800 178 aa15.75■□□□□ 0.11
CCDC42-203ENST00000581598 UXS1Q8NBZ7 420 aa15.75■□□□□ 0.11
CCDC42-203ENST00000581598 ZNF502Q8TBZ5 544 aa15.75■□□□□ 0.11
CCDC42-203ENST00000581598 RRNAD1Q96FB5 475 aaKnown RBP15.75■□□□□ 0.11
CCDC42-203ENST00000581598 PLEKHA3Q9HB20 300 aa15.75■□□□□ 0.11
CCDC42-203ENST00000581598 S4R3C0 116 aa15.75■□□□□ 0.11
CCDC42-203ENST00000581598 EPPK1P58107 5090 aaKnown RBP15.75■□□□□ 0.11
CCDC42-203ENST00000581598 TMEM213A2RRL7 107 aa15.74■□□□□ 0.11
CCDC42-203ENST00000581598 IFNA21P01568 189 aa15.74■□□□□ 0.11
CCDC42-203ENST00000581598 CLEC3BP05452 202 aa15.74■□□□□ 0.11
CCDC42-203ENST00000581598 SLC25A6P12236 298 aa15.74■□□□□ 0.11
CCDC42-203ENST00000581598 FCN2Q15485 313 aa15.74■□□□□ 0.11
CCDC42-203ENST00000581598 H2BFWTQ7Z2G1 175 aa15.74■□□□□ 0.11
CCDC42-203ENST00000581598 GPR146Q96CH1 333 aa15.74■□□□□ 0.11
CCDC42-203ENST00000581598 CYB5BO43169 146 aa15.73■□□□□ 0.11
CCDC42-203ENST00000581598 OR11H7Q8NGC8 314 aa15.73■□□□□ 0.11
CCDC42-203ENST00000581598 RNASE11Q8TAA1 199 aaKnown RBP15.73■□□□□ 0.11
CCDC42-203ENST00000581598 VN1R17PQ8TDU5 208 aa15.73■□□□□ 0.11
CCDC42-203ENST00000581598 CHAC2Q8WUX2 184 aa15.73■□□□□ 0.11
CCDC42-203ENST00000581598 MARC2Q969Z3 335 aa15.73■□□□□ 0.11
CCDC42-203ENST00000581598 TENM2Q9NT68 2774 aa15.72■□□□□ 0.11
CCDC42-203ENST00000581598 A0A1B0GU03 582 aa15.72■□□□□ 0.11
CCDC42-203ENST00000581598 ZNF320A2RRD8 509 aa15.72■□□□□ 0.11
CCDC42-203ENST00000581598 MPTX1A8MV57 137 aa15.72■□□□□ 0.11
CCDC42-203ENST00000581598 OR11H12B2RN74 326 aa15.72■□□□□ 0.11
CCDC42-203ENST00000581598 CCSO14618 274 aa15.72■□□□□ 0.11
CCDC42-203ENST00000581598 GOSR2O14653 212 aa15.72■□□□□ 0.11
CCDC42-203ENST00000581598 TRAPPC2P0DI81 140 aa15.72■□□□□ 0.11
CCDC42-203ENST00000581598 TRAPPC2BP0DI82 140 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms