RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 SCP2D1Q9UJQ7 156 aa20.21■□□□□ 0.83
LINC00271-207ENST00000580741 UFC1Q9Y3C8 167 aa20.21■□□□□ 0.83
LINC00271-207ENST00000580741 A8MZ25 164 aa20.2■□□□□ 0.82
LINC00271-207ENST00000580741 CDS2O95674 445 aa20.2■□□□□ 0.82
LINC00271-207ENST00000580741 MT-CO2P00403 227 aa20.2■□□□□ 0.82
LINC00271-207ENST00000580741 ZNF57Q68EA5 555 aaPredicted RBP20.2■□□□□ 0.82
LINC00271-207ENST00000580741 SPSB3Q6PJ21 355 aa20.2■□□□□ 0.82
LINC00271-207ENST00000580741 SELENOHQ8IZQ5 122 aaKnown RBP20.2■□□□□ 0.82
LINC00271-207ENST00000580741 TRIM63Q969Q1 353 aa20.2■□□□□ 0.82
LINC00271-207ENST00000580741 TMEM230Q96A57 120 aa20.2■□□□□ 0.82
LINC00271-207ENST00000580741 RCHY1Q96PM5 261 aa20.2■□□□□ 0.82
LINC00271-207ENST00000580741 NEURL2Q9BR09 285 aa20.2■□□□□ 0.82
LINC00271-207ENST00000580741 WFDC10AQ9H1F0 79 aa20.2■□□□□ 0.82
LINC00271-207ENST00000580741 TUBA4BQ9H853 241 aa20.2■□□□□ 0.82
LINC00271-207ENST00000580741 PRR13Q9NZ81 148 aa20.2■□□□□ 0.82
LINC00271-207ENST00000580741 S100A5P33763 92 aa20.19■□□□□ 0.82
LINC00271-207ENST00000580741 HOXA1P49639 335 aaPredicted RBP20.19■□□□□ 0.82
LINC00271-207ENST00000580741 KLF9Q13886 244 aaPredicted RBP20.19■□□□□ 0.82
LINC00271-207ENST00000580741 RBPMSQ93062 196 aaKnown RBP20.19■□□□□ 0.82
LINC00271-207ENST00000580741 SCAF4O95104 1147 aaKnown RBP20.18■□□□□ 0.82
LINC00271-207ENST00000580741 DHODHQ02127 395 aa20.18■□□□□ 0.82
LINC00271-207ENST00000580741 ZNF79Q15937 498 aa20.18■□□□□ 0.82
LINC00271-207ENST00000580741 TMEM268Q5VZI3 342 aa20.18■□□□□ 0.82
LINC00271-207ENST00000580741 ATP6V0BQ99437 205 aa20.18■□□□□ 0.82
LINC00271-207ENST00000580741 C20orf24Q9BUV8 137 aa20.18■□□□□ 0.82
LINC00271-207ENST00000580741 TENM3Q9P273 2699 aa20.17■□□□□ 0.82
LINC00271-207ENST00000580741 ZNF207O43670 478 aaKnown RBP20.17■□□□□ 0.82
LINC00271-207ENST00000580741 CTSGP08311 255 aa20.17■□□□□ 0.82
LINC00271-207ENST00000580741 C8orf88P0DMB2 117 aa20.17■□□□□ 0.82
LINC00271-207ENST00000580741 SNCAP37840 140 aa20.17■□□□□ 0.82
LINC00271-207ENST00000580741 MFAP4P55083 255 aa20.17■□□□□ 0.82
LINC00271-207ENST00000580741 ELLP55199 621 aaPredicted RBP20.17■□□□□ 0.82
LINC00271-207ENST00000580741 MARC2Q969Z3 335 aa20.17■□□□□ 0.82
LINC00271-207ENST00000580741 GPR146Q96CH1 333 aa20.17■□□□□ 0.82
LINC00271-207ENST00000580741 ZNF414Q96IQ9 312 aa20.17■□□□□ 0.82
LINC00271-207ENST00000580741 ZMAT4Q9H898 229 aa20.17■□□□□ 0.82
LINC00271-207ENST00000580741 MRPL27Q9P0M9 148 aaKnown RBP20.17■□□□□ 0.82
LINC00271-207ENST00000580741 NDUFA4O00483 81 aa20.16■□□□□ 0.82
LINC00271-207ENST00000580741 CCDC190Q86UF4 302 aa20.16■□□□□ 0.82
LINC00271-207ENST00000580741 DEFB125Q8N687 156 aa20.16■□□□□ 0.82
LINC00271-207ENST00000580741 TM2D3Q9BRN9 247 aa20.16■□□□□ 0.82
LINC00271-207ENST00000580741 ENY2Q9NPA8 101 aa20.16■□□□□ 0.82
LINC00271-207ENST00000580741 CACNG5Q9UF02 275 aa20.16■□□□□ 0.82
LINC00271-207ENST00000580741 DNAH7Q8WXX0 4024 aa20.16■□□□□ 0.82
LINC00271-207ENST00000580741 INS-IGF2F8WCM5 200 aa20.15■□□□□ 0.82
LINC00271-207ENST00000580741 ZNF701M0R085 212 aaPredicted RBP20.15■□□□□ 0.82
LINC00271-207ENST00000580741 RNASE2P10153 161 aaKnown RBP20.15■□□□□ 0.82
LINC00271-207ENST00000580741 AKR1C4P17516 323 aa20.15■□□□□ 0.82
LINC00271-207ENST00000580741 TMEM187Q14656 261 aa20.15■□□□□ 0.82
LINC00271-207ENST00000580741 FAM219AQ8IW50 185 aa20.15■□□□□ 0.82
LINC00271-207ENST00000580741 TOMM5Q8N4H5 51 aa20.15■□□□□ 0.82
LINC00271-207ENST00000580741 SCGB3A2Q96PL1 93 aa20.15■□□□□ 0.82
LINC00271-207ENST00000580741 DAZ1Q9NQZ3 744 aaKnown RBP20.15■□□□□ 0.82
LINC00271-207ENST00000580741 KMT2CQ8NEZ4 4911 aaKnown RBP20.14■□□□□ 0.82
LINC00271-207ENST00000580741 NUPL2O15504 423 aaKnown RBP20.14■□□□□ 0.81
LINC00271-207ENST00000580741 HAGHQ16775 308 aa20.14■□□□□ 0.81
LINC00271-207ENST00000580741 GAR1Q9NY12 217 aaKnown RBP20.14■□□□□ 0.81
LINC00271-207ENST00000580741 TMEM56-RWDD3S4R434 201 aa20.14■□□□□ 0.81
LINC00271-207ENST00000580741 FCGR2BP31994 310 aaPredicted RBP20.13■□□□□ 0.81
LINC00271-207ENST00000580741 FAUP35544 74 aaKnown RBP20.13■□□□□ 0.81
LINC00271-207ENST00000580741 GALNT14Q96FL9 552 aa20.13■□□□□ 0.81
LINC00271-207ENST00000580741 CTNNBIP1Q9NSA3 81 aaPredicted RBP20.13■□□□□ 0.81
LINC00271-207ENST00000580741 KCNIP3Q9Y2W7 256 aa20.13■□□□□ 0.81
LINC00271-207ENST00000580741 OR11H12B2RN74 326 aa20.12■□□□□ 0.81
LINC00271-207ENST00000580741 GNG7O60262 68 aa20.12■□□□□ 0.81
LINC00271-207ENST00000580741 NXPH3O95157 252 aa20.12■□□□□ 0.81
LINC00271-207ENST00000580741 AP3S2P59780 193 aa20.12■□□□□ 0.81
LINC00271-207ENST00000580741 SPCS3P61009 180 aa20.12■□□□□ 0.81
LINC00271-207ENST00000580741 SUPT4H1P63272 117 aaKnown RBP20.12■□□□□ 0.81
LINC00271-207ENST00000580741 AARDQ4LEZ3 155 aa20.12■□□□□ 0.81
LINC00271-207ENST00000580741 RBPMS2Q6ZRY4 209 aaKnown RBP20.12■□□□□ 0.81
LINC00271-207ENST00000580741 TXN2Q99757 166 aa20.12■□□□□ 0.81
LINC00271-207ENST00000580741 SRD5A3Q9H8P0 318 aa20.12■□□□□ 0.81
LINC00271-207ENST00000580741 YIF1AO95070 293 aa20.11■□□□□ 0.81
LINC00271-207ENST00000580741 RELQ04864 619 aaPredicted RBP20.11■□□□□ 0.81
LINC00271-207ENST00000580741 OR52B4Q8NGK2 314 aa20.11■□□□□ 0.81
LINC00271-207ENST00000580741 SUB1P53999 127 aaKnown RBP eCLIP20.1■□□□□ 0.81
LINC00271-207ENST00000580741 PVRIGQ6DKI7 326 aa20.1■□□□□ 0.81
LINC00271-207ENST00000580741 SLC16A13Q7RTY0 426 aa20.1■□□□□ 0.81
LINC00271-207ENST00000580741 TMED4Q7Z7H5 227 aa20.1■□□□□ 0.81
LINC00271-207ENST00000580741 TRAV25A0A0B4J276 109 aa20.09■□□□□ 0.81
LINC00271-207ENST00000580741 RBMY1BA6NDE4 496 aaKnown RBP20.09■□□□□ 0.81
LINC00271-207ENST00000580741 RBMY1EA6NEQ0 496 aaKnown RBP20.09■□□□□ 0.81
LINC00271-207ENST00000580741 RBMY1DP0C7P1 496 aaKnown RBP20.09■□□□□ 0.81
LINC00271-207ENST00000580741 MLANAQ16655 118 aa20.09■□□□□ 0.81
LINC00271-207ENST00000580741 SPANXN2Q5MJ10 180 aa20.09■□□□□ 0.81
LINC00271-207ENST00000580741 DUSP18Q8NEJ0 188 aa20.09■□□□□ 0.81
LINC00271-207ENST00000580741 OR52E5Q8NH55 327 aa20.09■□□□□ 0.81
LINC00271-207ENST00000580741 IL22RA2Q969J5 263 aa20.09■□□□□ 0.81
LINC00271-207ENST00000580741 SRRQ9GZT4 340 aa20.09■□□□□ 0.81
LINC00271-207ENST00000580741 FNDC4Q9H6D8 234 aaPredicted RBP20.09■□□□□ 0.81
LINC00271-207ENST00000580741 MRPL36Q9P0J6 103 aaKnown RBP20.09■□□□□ 0.81
LINC00271-207ENST00000580741 IGHV3-49A0A0A0MS15 119 aa20.08■□□□□ 0.81
LINC00271-207ENST00000580741 C15orf62A8K5M9 175 aa20.08■□□□□ 0.81
LINC00271-207ENST00000580741 K7EMT4 169 aa20.08■□□□□ 0.81
LINC00271-207ENST00000580741 BSXQ3C1V8 233 aa20.08■□□□□ 0.81
LINC00271-207ENST00000580741 LINC00322Q6ZN03 302 aaPredicted RBP20.08■□□□□ 0.81
LINC00271-207ENST00000580741 LYZL2Q7Z4W2 148 aa20.08■□□□□ 0.81
LINC00271-207ENST00000580741 HEYLQ9NQ87 328 aaPredicted RBP20.08■□□□□ 0.81
LINC00271-207ENST00000580741 CEBPZOSA8MTT3 80 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms