RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 TMEM68Q96MH6 324 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 SCGB3A2Q96PL1 93 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 FYTTD1Q96QD9 318 aaKnown RBP2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 TSC22D3Q99576 134 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 MRPL36Q9P0J6 103 aaKnown RBP2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 CACNG5Q9UF02 275 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 PRNDQ9UKY0 176 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 HUWE1Q7Z6Z7 4374 aaKnown RBP2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 A0A1B0GU03 582 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 FAM240BA0A1B0GVZ2 78 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 KRTAP23-1A1A580 65 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 MFSD2BA6NFX1 497 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 C15orf62A8K5M9 175 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 PMS2P5A8MQ11 134 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 CENPXA8MT69 81 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 SNRPGP15A8MWD9 76 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 G3V3Q6 166 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 I3L2K1 104 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 CCSO14618 274 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 CREBL2O60519 120 aaPredicted RBP2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 NXPH3O95157 252 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 NDUFB8O95169 186 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 REG1AP05451 166 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 LGALS1P09382 135 aaKnown RBP2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 TRAPPC2P0DI81 140 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 TRAPPC2BP0DI82 140 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 VAMP1P23763 118 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 AKR1C2P52895 323 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 H2BFSP57053 126 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 RAB25P57735 213 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 SRPXP78539 464 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 TNFRSF9Q07011 255 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 CBX3Q13185 183 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 DCTN2Q13561 401 aaKnown RBP2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 SMCO1Q147U7 214 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 PLGLAQ15195 96 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 TRIM16LQ309B1 348 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 DEFB136Q30KP8 78 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 SPINK9Q5DT21 86 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 CXorf66Q5JRM2 361 aaPredicted RBP2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 MZT2BQ6NZ67 158 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 ZNF343Q6P1L6 599 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 TEX38Q6PEX7 206 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 ADAMTSL5Q6ZMM2 481 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 H2BFWTQ7Z2G1 175 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 CENPVQ7Z7K6 275 aaPredicted RBP2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 HAPLN4Q86UW8 402 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 C3orf56Q8N813 242 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 WFDC9Q8NEX5 89 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 OR5T1Q8NG75 326 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 OR1L8Q8NGR8 309 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 ZNF502Q8TBZ5 544 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 SCARB1Q8WTV0 552 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 C4orf3Q8WVX3 66 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 RAX2Q96IS3 184 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 SPIN2AQ99865 258 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 SPIN2BQ9BPZ2 258 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 AIFM2Q9BRQ8 373 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 FNDC4Q9H6D8 234 aaPredicted RBP2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 ZFP57Q9NU63 452 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 RCL1Q9Y2P8 373 aaKnown RBP2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 TMED3Q9Y3Q3 217 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 OR51B2Q9Y5P1 312 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 TSSC4Q9Y5U2 329 aaPredicted RBP2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 F11RQ9Y624 299 aaKnown RBP2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 COL7A1Q02388 2944 aa2.9□□□□□ -1.95
SMARCE1-215ENST00000578995 AGRNO00468 2067 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 IGHV4OR15-8A0A075B7B6 117 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 A0A087WW49 117 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 TCRBV4S1A1TA0A5B7 111 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 FAM223BA6NKX1 122 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 FAM90A26D6RGX4 464 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 INMT-MINDY4F8WBC2 141 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 H0YIZ8 118 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 BMPR1BO00238 502 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 PRAF2O60831 178 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 CCNKO75909 580 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 CNIH1O95406 144 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 MBPP02686 304 aaPredicted RBP2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 TRGV3P03979 118 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 HOXB5P09067 269 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 SULT1A3P0DMM9 295 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 SULT1A4P0DMN0 295 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 OR13C7P0DN81 318 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 PF4V1P10720 104 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 ANXA3P12429 323 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 CXCL3P19876 107 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 EDN2P20800 178 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 S100GP29377 79 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 FCGR2BP31994 310 aaPredicted RBP2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 INPP1P49441 399 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 SPCS3P61009 180 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 ERVK-16P61578 105 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 SLC35B1P78383 322 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 RHOGP84095 191 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 TMEM267Q0VDI3 215 aaPredicted RBP2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 TATDN3Q17R31 274 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 C4orf46Q504U0 113 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 C2orf83Q53S99 150 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms