RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 LEMD1Q68G75 181 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 TOMM20LQ6UXN7 152 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 TCF24Q7RTU0 167 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 CROCCP3Q8IVE0 287 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 KIR2DL5AQ8N109 375 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 FAM24BQ8N5W8 94 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 KIR2DL5BQ8NHK3 375 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 ST8SIA2Q92186 375 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 TSC22D3Q99576 134 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 NXF2Q9GZY0 626 aaKnown RBP6.56□□□□□ -1.36
GGA3-207ENST00000578896 CSTL1Q9H114 145 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 FKBP11Q9NYL4 201 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 MRPL36Q9P0J6 103 aaKnown RBP6.56□□□□□ -1.36
GGA3-207ENST00000578896 FBXL17Q9UF56 701 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 DNAH2Q9P225 4427 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 DNAH17Q9UFH2 4485 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 MPTX1A8MV57 137 aa6.55□□□□□ -1.36
GGA3-207ENST00000578896 DFFBO76075 338 aa6.55□□□□□ -1.36
GGA3-207ENST00000578896 IGKV1-5P01602 117 aa6.55□□□□□ -1.36
GGA3-207ENST00000578896 PGAM2P15259 253 aa6.55□□□□□ -1.36
GGA3-207ENST00000578896 ELK1P19419 428 aa6.55□□□□□ -1.36
GGA3-207ENST00000578896 DEFB131AP59861 70 aa6.55□□□□□ -1.36
GGA3-207ENST00000578896 HSPE1P61604 102 aaKnown RBP6.55□□□□□ -1.36
GGA3-207ENST00000578896 PRCDQ00LT1 54 aa6.55□□□□□ -1.36
GGA3-207ENST00000578896 RELQ04864 619 aaPredicted RBP6.55□□□□□ -1.36
GGA3-207ENST00000578896 OR11H2Q8NH07 326 aa6.55□□□□□ -1.36
GGA3-207ENST00000578896 OR10C1Q96KK4 312 aa6.55□□□□□ -1.36
GGA3-207ENST00000578896 ATP6V0BQ99437 205 aa6.55□□□□□ -1.36
GGA3-207ENST00000578896 RARRES2Q99969 163 aa6.55□□□□□ -1.36
GGA3-207ENST00000578896 KLK5Q9Y337 293 aaPredicted RBP6.55□□□□□ -1.36
GGA3-207ENST00000578896 KIAA1109Q2LD37 5005 aa6.55□□□□□ -1.36
GGA3-207ENST00000578896 A0A0B4J293 547 aa6.54□□□□□ -1.36
GGA3-207ENST00000578896 A0A1B0GU03 582 aa6.54□□□□□ -1.36
GGA3-207ENST00000578896 SMIM31A0A1B0GVY4 71 aa6.54□□□□□ -1.36
GGA3-207ENST00000578896 DNASE2O00115 360 aaPredicted RBP6.54□□□□□ -1.36
GGA3-207ENST00000578896 ST8SIA3O43173 380 aa6.54□□□□□ -1.36
GGA3-207ENST00000578896 TMEM127O75204 238 aa6.54□□□□□ -1.36
GGA3-207ENST00000578896 CA1P00915 261 aaPredicted RBP6.54□□□□□ -1.36
GGA3-207ENST00000578896 ETV6P41212 452 aa6.54□□□□□ -1.36
GGA3-207ENST00000578896 PPP5CP53041 499 aa6.54□□□□□ -1.36
GGA3-207ENST00000578896 RPL11P62913 178 aaKnown RBP6.54□□□□□ -1.36
GGA3-207ENST00000578896 ERHP84090 104 aaKnown RBP6.54□□□□□ -1.36
GGA3-207ENST00000578896 SP6Q3SY56 376 aa6.54□□□□□ -1.36
GGA3-207ENST00000578896 LPCAT3Q6P1A2 487 aa6.54□□□□□ -1.36
GGA3-207ENST00000578896 CADM3Q8N126 398 aa6.54□□□□□ -1.36
GGA3-207ENST00000578896 CMTM3Q96MX0 182 aa6.54□□□□□ -1.36
GGA3-207ENST00000578896 TP53RKQ96S44 253 aa6.54□□□□□ -1.36
GGA3-207ENST00000578896 TXN2Q99757 166 aa6.54□□□□□ -1.36
GGA3-207ENST00000578896 FUNDC2Q9BWH2 189 aa6.54□□□□□ -1.36
GGA3-207ENST00000578896 KRTAP17-1Q9BYP8 105 aa6.54□□□□□ -1.36
GGA3-207ENST00000578896 C6orf62Q9GZU0 229 aaPredicted RBP6.54□□□□□ -1.36
GGA3-207ENST00000578896 MS4A6AQ9H2W1 248 aa6.54□□□□□ -1.36
GGA3-207ENST00000578896 KLK11Q9UBX7 282 aa6.54□□□□□ -1.36
GGA3-207ENST00000578896 PUS1Q9Y606 427 aaKnown RBP eCLIP6.54□□□□□ -1.36
GGA3-207ENST00000578896 A0A087WXM4 84 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 A0A0G2JRQ6 117 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 FAM25AB3EWG3 89 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 FAM25CB3EWG5 89 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 FAM25GB3EWG6 89 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 TMEM50AO95807 157 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 IFNA17P01571 189 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 APOA1P02647 267 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 CD3DP04234 171 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 S100GP29377 79 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 RCVRNP35243 200 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 UCP3P55916 312 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 PIGPP57054 158 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 PRR20EP86478 221 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 PRR20CP86479 221 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 PRR20DP86480 221 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 PRR20BP86481 221 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 PRR20AP86496 221 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 TMEM217Q8N7C4 229 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 SLC35G3Q8N808 338 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 ZNF114Q8NC26 417 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 DUSP18Q8NEJ0 188 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 OR4D10Q8NGI6 311 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 OR52I2Q8NH67 350 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 C11orf45Q8TAV5 145 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 NAA50Q9GZZ1 169 aaKnown RBP6.53□□□□□ -1.36
GGA3-207ENST00000578896 FNDC4Q9H6D8 234 aaPredicted RBP6.53□□□□□ -1.36
GGA3-207ENST00000578896 ZFAND3Q9H8U3 227 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 RABAC1Q9UI14 185 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 FAT2Q9NYQ8 4349 aa6.53□□□□□ -1.36
GGA3-207ENST00000578896 DYNC1H1Q14204 4646 aaKnown RBP6.53□□□□□ -1.36
GGA3-207ENST00000578896 KNCNA6PVL3 124 aa6.52□□□□□ -1.37
GGA3-207ENST00000578896 P0C879 139 aa6.52□□□□□ -1.37
GGA3-207ENST00000578896 RNASE2P10153 161 aaKnown RBP6.52□□□□□ -1.37
GGA3-207ENST00000578896 SNCAP37840 140 aa6.52□□□□□ -1.37
GGA3-207ENST00000578896 NPBWR1P48145 328 aa6.52□□□□□ -1.37
GGA3-207ENST00000578896 AKR1C2P52895 323 aa6.52□□□□□ -1.37
GGA3-207ENST00000578896 PAFAH1B2P68402 229 aa6.52□□□□□ -1.37
GGA3-207ENST00000578896 ZNF600Q6ZNG1 722 aa6.52□□□□□ -1.37
GGA3-207ENST00000578896 Q6ZRM9 215 aa6.52□□□□□ -1.37
GGA3-207ENST00000578896 GINS3Q9BRX5 216 aa6.52□□□□□ -1.37
GGA3-207ENST00000578896 VSIRQ9H7M9 311 aa6.52□□□□□ -1.37
GGA3-207ENST00000578896 SCPEP1Q9HB40 452 aa6.52□□□□□ -1.37
GGA3-207ENST00000578896 FAM212BQ9NTI7 297 aaPredicted RBP6.52□□□□□ -1.37
GGA3-207ENST00000578896 C3orf85A0A1B0GTC6 90 aa6.51□□□□□ -1.37
GGA3-207ENST00000578896 IFNA4P05014 189 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms