RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 CRYGCP07315 174 aa14.67□□□□□ -0.06
PRKCA-203ENST00000578063 OPRK1P41145 380 aa14.67□□□□□ -0.06
PRKCA-203ENST00000578063 SERF2P84101 59 aa14.67□□□□□ -0.06
PRKCA-203ENST00000578063 ETFRF1Q6IPR1 90 aa14.67□□□□□ -0.06
PRKCA-203ENST00000578063 TMEM182Q6ZP80 229 aaPredicted RBP14.67□□□□□ -0.06
PRKCA-203ENST00000578063 CENPVQ7Z7K6 275 aaPredicted RBP14.67□□□□□ -0.06
PRKCA-203ENST00000578063 ZNF709Q8N972 641 aa14.67□□□□□ -0.06
PRKCA-203ENST00000578063 SAT2Q96F10 170 aaPredicted RBP14.67□□□□□ -0.06
PRKCA-203ENST00000578063 SLC35E1Q96K37 410 aa14.67□□□□□ -0.06
PRKCA-203ENST00000578063 NPCDR1Q9BY65 106 aa14.67□□□□□ -0.06
PRKCA-203ENST00000578063 PLA2G2EQ9NZK7 142 aa14.67□□□□□ -0.06
PRKCA-203ENST00000578063 PLXNB1O43157 2135 aa14.67□□□□□ -0.06
PRKCA-203ENST00000578063 BTBD17A6NE02 478 aa14.66□□□□□ -0.06
PRKCA-203ENST00000578063 ZNF705EA8MWA4 302 aaPredicted RBP14.66□□□□□ -0.06
PRKCA-203ENST00000578063 TRIM77I1YAP6 450 aa14.66□□□□□ -0.06
PRKCA-203ENST00000578063 IER3P46695 156 aa14.66□□□□□ -0.06
PRKCA-203ENST00000578063 SGMS2Q8NHU3 365 aa14.66□□□□□ -0.06
PRKCA-203ENST00000578063 PRDM13Q9H4Q3 707 aa14.66□□□□□ -0.06
PRKCA-203ENST00000578063 PARP11Q9NR21 331 aa14.66□□□□□ -0.06
PRKCA-203ENST00000578063 LSM4Q9Y4Z0 139 aaKnown RBP14.66□□□□□ -0.06
PRKCA-203ENST00000578063 SOX15O60248 233 aa14.66□□□□□ -0.06
PRKCA-203ENST00000578063 AMY1AP04745 511 aa14.66□□□□□ -0.06
PRKCA-203ENST00000578063 DEFA4P12838 97 aa14.66□□□□□ -0.06
PRKCA-203ENST00000578063 MFAP2P55001 183 aa14.66□□□□□ -0.06
PRKCA-203ENST00000578063 AKR1C8PQ5T2L2 129 aa14.66□□□□□ -0.06
PRKCA-203ENST00000578063 ASPHD1Q5U4P2 390 aa14.66□□□□□ -0.06
PRKCA-203ENST00000578063 TEPPQ6URK8 271 aa14.66□□□□□ -0.06
PRKCA-203ENST00000578063 SPNS3Q6ZMD2 512 aa14.66□□□□□ -0.06
PRKCA-203ENST00000578063 TMEM144Q7Z5S9 345 aa14.66□□□□□ -0.06
PRKCA-203ENST00000578063 TTC9CQ8N5M4 171 aa14.66□□□□□ -0.06
PRKCA-203ENST00000578063 MISP3Q96FF7 219 aa14.66□□□□□ -0.06
PRKCA-203ENST00000578063 TMEM68Q96MH6 324 aa14.66□□□□□ -0.06
PRKCA-203ENST00000578063 WNT10AQ9GZT5 417 aa14.66□□□□□ -0.06
PRKCA-203ENST00000578063 FBXO7Q9Y3I1 522 aa14.66□□□□□ -0.06
PRKCA-203ENST00000578063 NOTCH2Q04721 2471 aa14.65□□□□□ -0.06
PRKCA-203ENST00000578063 NAV3Q8IVL0 2385 aa14.65□□□□□ -0.06
PRKCA-203ENST00000578063 LINC00862A6NCI5 91 aa14.65□□□□□ -0.06
PRKCA-203ENST00000578063 CYB5BO43169 146 aa14.65□□□□□ -0.06
PRKCA-203ENST00000578063 IGHV4-59P01825 116 aa14.65□□□□□ -0.06
PRKCA-203ENST00000578063 PRH1P02810 166 aa14.65□□□□□ -0.06
PRKCA-203ENST00000578063 EGR2P11161 476 aaPredicted RBP14.65□□□□□ -0.06
PRKCA-203ENST00000578063 BLOC1S1P78537 153 aa14.65□□□□□ -0.06
PRKCA-203ENST00000578063 RAB31Q13636 194 aa14.65□□□□□ -0.06
PRKCA-203ENST00000578063 GAMTQ14353 236 aa14.65□□□□□ -0.06
PRKCA-203ENST00000578063 Q6YL49 198 aa14.65□□□□□ -0.06
PRKCA-203ENST00000578063 KCNIP2Q9NS61 270 aa14.65□□□□□ -0.06
PRKCA-203ENST00000578063 RFNGQ9Y644 331 aa14.65□□□□□ -0.06
PRKCA-203ENST00000578063 CSPG4Q6UVK1 2322 aa14.65□□□□□ -0.06
PRKCA-203ENST00000578063 TEX15Q9BXT5 2789 aa14.64□□□□□ -0.07
PRKCA-203ENST00000578063 ATP6V0E1O15342 81 aa14.64□□□□□ -0.07
PRKCA-203ENST00000578063 DPPA3Q6W0C5 159 aa14.64□□□□□ -0.07
PRKCA-203ENST00000578063 C19orf35Q6ZS72 473 aa14.64□□□□□ -0.07
PRKCA-203ENST00000578063 LFNGQ8NES3 379 aa14.64□□□□□ -0.07
PRKCA-203ENST00000578063 FNDC4Q9H6D8 234 aaPredicted RBP14.64□□□□□ -0.07
PRKCA-203ENST00000578063 AKAP9Q99996 3911 aa14.64□□□□□ -0.07
PRKCA-203ENST00000578063 CAMLGP49069 296 aa14.63□□□□□ -0.07
PRKCA-203ENST00000578063 CXorf58Q96LI9 332 aa14.63□□□□□ -0.07
PRKCA-203ENST00000578063 ZNF48Q96MX3 618 aaPredicted RBP14.63□□□□□ -0.07
PRKCA-203ENST00000578063 MGST2Q99735 147 aa14.63□□□□□ -0.07
PRKCA-203ENST00000578063 YAE1D1Q9NRH1 226 aa14.63□□□□□ -0.07
PRKCA-203ENST00000578063 DMRT1Q9Y5R6 373 aa14.63□□□□□ -0.07
PRKCA-203ENST00000578063 SH2D7A6NKC9 451 aaPredicted RBP14.63□□□□□ -0.07
PRKCA-203ENST00000578063 HNF1AP20823 631 aa14.63□□□□□ -0.07
PRKCA-203ENST00000578063 SRP14P37108 136 aaKnown RBP14.63□□□□□ -0.07
PRKCA-203ENST00000578063 Q6ZRG5 221 aa14.63□□□□□ -0.07
PRKCA-203ENST00000578063 MED9Q9NWA0 146 aa14.63□□□□□ -0.07
PRKCA-203ENST00000578063 VPREB3Q9UKI3 123 aa14.63□□□□□ -0.07
PRKCA-203ENST00000578063 CELSR1Q9NYQ6 3014 aa14.63□□□□□ -0.07
PRKCA-203ENST00000578063 MBP02144 154 aa14.62□□□□□ -0.07
PRKCA-203ENST00000578063 CRIP2P52943 208 aaPredicted RBP14.62□□□□□ -0.07
PRKCA-203ENST00000578063 MLANAQ16655 118 aa14.62□□□□□ -0.07
PRKCA-203ENST00000578063 UNQ5815/PRO19632Q6UWF5 114 aa14.62□□□□□ -0.07
PRKCA-203ENST00000578063 OR2T6Q8NHC8 308 aa14.62□□□□□ -0.07
PRKCA-203ENST00000578063 FAM110DQ8TAY7 271 aaPredicted RBP14.62□□□□□ -0.07
PRKCA-203ENST00000578063 ACY3Q96HD9 319 aa14.62□□□□□ -0.07
PRKCA-203ENST00000578063 TMUB1Q9BVT8 246 aa14.62□□□□□ -0.07
PRKCA-203ENST00000578063 GGTLC1Q9BX51 225 aa14.62□□□□□ -0.07
PRKCA-203ENST00000578063 AGPAT2O15120 278 aa14.61□□□□□ -0.07
PRKCA-203ENST00000578063 MT-CO2P00403 227 aa14.61□□□□□ -0.07
PRKCA-203ENST00000578063 ECSCRQ19T08 205 aa14.61□□□□□ -0.07
PRKCA-203ENST00000578063 AKIRIN2Q53H80 203 aa14.61□□□□□ -0.07
PRKCA-203ENST00000578063 TMEM41BQ5BJD5 291 aa14.61□□□□□ -0.07
PRKCA-203ENST00000578063 PXDC1Q5TGL8 231 aa14.61□□□□□ -0.07
PRKCA-203ENST00000578063 IL17RELQ6ZVW7 336 aa14.61□□□□□ -0.07
PRKCA-203ENST00000578063 SLC7A5P1Q8MH63 180 aa14.61□□□□□ -0.07
PRKCA-203ENST00000578063 FAM213BQ8TBF2 198 aa14.61□□□□□ -0.07
PRKCA-203ENST00000578063 PFDN2Q9UHV9 154 aa14.61□□□□□ -0.07
PRKCA-203ENST00000578063 MYO9AB2RTY4 2548 aa14.61□□□□□ -0.07
PRKCA-203ENST00000578063 ZNF469Q96JG9 3925 aaPredicted RBP14.61□□□□□ -0.07
PRKCA-203ENST00000578063 IGLV11-55A0A075B6I3 123 aa14.61□□□□□ -0.07
PRKCA-203ENST00000578063 IGHG2P01859 326 aa14.61□□□□□ -0.07
PRKCA-203ENST00000578063 ELLP55199 621 aaPredicted RBP14.61□□□□□ -0.07
PRKCA-203ENST00000578063 C9orf152Q5JTZ5 239 aa14.61□□□□□ -0.07
PRKCA-203ENST00000578063 FFAR4Q5NUL3 377 aa14.61□□□□□ -0.07
PRKCA-203ENST00000578063 TMEM160Q9NX00 188 aa14.61□□□□□ -0.07
PRKCA-203ENST00000578063 THYN1Q9P016 225 aa14.61□□□□□ -0.07
PRKCA-203ENST00000578063 I3L2K1 104 aa14.6□□□□□ -0.07
PRKCA-203ENST00000578063 HIST1H1BP16401 226 aaKnown RBP14.6□□□□□ -0.07
PRKCA-203ENST00000578063 FHITP49789 147 aa14.6□□□□□ -0.07
PRKCA-203ENST00000578063 RND2P52198 227 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms