RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 MRPL14Q6P1L8 145 aaKnown RBP9□□□□□ -0.97
SEC22B-201ENST00000578049 DPM2O94777 84 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 CECR9P0C854 216 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 PSG7Q13046 419 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 ZNRF1Q8ND25 227 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 FGF11Q92914 225 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 TNFRSF14Q92956 283 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 LOC105371242A0A075B767 164 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 FOXH1O75593 365 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 TMEM14EPQ6UXP3 125 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 SPANXA1Q9NS26 97 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 A0A0G2JLM5 398 aa8.99□□□□□ -0.97
SEC22B-201ENST00000578049 EFNB3Q15768 340 aa8.99□□□□□ -0.97
SEC22B-201ENST00000578049 ZNF56Q15929 161 aa8.99□□□□□ -0.97
SEC22B-201ENST00000578049 CDCP2Q5VXM1 449 aa8.99□□□□□ -0.97
SEC22B-201ENST00000578049 OR5AN1Q8NGI8 311 aa8.99□□□□□ -0.97
SEC22B-201ENST00000578049 COL11A1P12107 1806 aaPredicted RBP8.99□□□□□ -0.97
SEC22B-201ENST00000578049 KIF26BQ2KJY2 2108 aa8.99□□□□□ -0.97
SEC22B-201ENST00000578049 LINC01551Q86U37 167 aa8.99□□□□□ -0.97
SEC22B-201ENST00000578049 RALGAPA2Q2PPJ7 1873 aa8.99□□□□□ -0.97
SEC22B-201ENST00000578049 CACNG7P62955 275 aa8.99□□□□□ -0.97
SEC22B-201ENST00000578049 SIGMAR1Q99720 223 aa8.99□□□□□ -0.97
SEC22B-201ENST00000578049 UBTD1Q9HAC8 227 aa8.99□□□□□ -0.97
SEC22B-201ENST00000578049 F2Z2F3 143 aa8.99□□□□□ -0.97
SEC22B-201ENST00000578049 CXCL1P09341 107 aa8.99□□□□□ -0.97
SEC22B-201ENST00000578049 TSPAN13O95857 204 aa8.99□□□□□ -0.97
SEC22B-201ENST00000578049 RRN3P1Q2M238 152 aa8.99□□□□□ -0.97
SEC22B-201ENST00000578049 CA1P00915 261 aaPredicted RBP8.98□□□□□ -0.97
SEC22B-201ENST00000578049 PYY3Q5JQD4 70 aa8.98□□□□□ -0.97
SEC22B-201ENST00000578049 KLK15Q9H2R5 256 aa8.98□□□□□ -0.97
SEC22B-201ENST00000578049 DUTP33316 252 aaKnown RBP8.98□□□□□ -0.97
SEC22B-201ENST00000578049 ACTL10Q5JWF8 245 aa8.98□□□□□ -0.97
SEC22B-201ENST00000578049 FLVCR1-AS1Q8TAF5 88 aa8.98□□□□□ -0.97
SEC22B-201ENST00000578049 TAF1LQ8IZX4 1826 aa8.98□□□□□ -0.97
SEC22B-201ENST00000578049 COL4A5P29400 1685 aa8.98□□□□□ -0.97
SEC22B-201ENST00000578049 CEACAM4O75871 244 aa8.98□□□□□ -0.97
SEC22B-201ENST00000578049 LEAP2Q969E1 77 aa8.98□□□□□ -0.97
SEC22B-201ENST00000578049 C18orf15Q96N68 181 aa8.98□□□□□ -0.97
SEC22B-201ENST00000578049 HEATR5BQ9P2D3 2071 aa8.98□□□□□ -0.97
SEC22B-201ENST00000578049 IGKV3D-15A0A087WSY6 115 aa8.98□□□□□ -0.97
SEC22B-201ENST00000578049 A0A0A6YYD4 124 aa8.98□□□□□ -0.97
SEC22B-201ENST00000578049 REG1AP05451 166 aa8.98□□□□□ -0.97
SEC22B-201ENST00000578049 APOBEC3AP31941 199 aaPredicted RBP8.98□□□□□ -0.97
SEC22B-201ENST00000578049 ERVK11-1P61568 191 aa8.98□□□□□ -0.97
SEC22B-201ENST00000578049 IGHV2OR16-5A0A0B4J2B6 119 aa8.98□□□□□ -0.97
SEC22B-201ENST00000578049 ATXN7O15265 892 aaPredicted RBP8.98□□□□□ -0.97
SEC22B-201ENST00000578049 MORN2Q502X0 79 aa8.98□□□□□ -0.97
SEC22B-201ENST00000578049 LYZL4Q96KX0 146 aa8.98□□□□□ -0.97
SEC22B-201ENST00000578049 RNASE7Q9H1E1 156 aaKnown RBP8.98□□□□□ -0.97
SEC22B-201ENST00000578049 FNDC10F2Z333 226 aa8.97□□□□□ -0.97
SEC22B-201ENST00000578049 H3BTX0 84 aa8.97□□□□□ -0.97
SEC22B-201ENST00000578049 SRSF1Q07955 248 aaKnown RBP eCLIP8.97□□□□□ -0.972e-7■■■■□ 24.7
SEC22B-201ENST00000578049 EFEMP2O95967 443 aa8.97□□□□□ -0.97
SEC22B-201ENST00000578049 SAA1P0DJI8 122 aaPredicted RBP8.97□□□□□ -0.97
SEC22B-201ENST00000578049 YAE1D1Q9NRH1 226 aa8.97□□□□□ -0.97
SEC22B-201ENST00000578049 TMEM74BQ9NUR3 256 aa8.97□□□□□ -0.97
SEC22B-201ENST00000578049 COL11A2P13942 1736 aaPredicted RBP8.97□□□□□ -0.97
SEC22B-201ENST00000578049 LDLRAD2Q5SZI1 272 aa8.97□□□□□ -0.97
SEC22B-201ENST00000578049 PRR7Q8TB68 274 aa8.97□□□□□ -0.97
SEC22B-201ENST00000578049 ZNF318Q5VUA4 2279 aa8.97□□□□□ -0.97
SEC22B-201ENST00000578049 IFI27L1Q96BM0 104 aa8.97□□□□□ -0.97
SEC22B-201ENST00000578049 RFPL3SP0C7P2 107 aa8.96□□□□□ -0.97
SEC22B-201ENST00000578049 TREML4Q6UXN2 200 aa8.96□□□□□ -0.97
SEC22B-201ENST00000578049 GGTLC1Q9BX51 225 aa8.96□□□□□ -0.97
SEC22B-201ENST00000578049 PEAR1Q5VY43 1037 aaPredicted RBP8.96□□□□□ -0.97
SEC22B-201ENST00000578049 NEU4Q8WWR8 484 aaPredicted RBP8.96□□□□□ -0.97
SEC22B-201ENST00000578049 MRAP2Q96G30 205 aa8.96□□□□□ -0.97
SEC22B-201ENST00000578049 TNFRSF18Q9Y5U5 241 aa8.96□□□□□ -0.97
SEC22B-201ENST00000578049 GBF1Q92538 1859 aa8.96□□□□□ -0.97
SEC22B-201ENST00000578049 SUMO2P61956 95 aaKnown RBP8.96□□□□□ -0.97
SEC22B-201ENST00000578049 RPP25LQ8N5L8 163 aaKnown RBP8.96□□□□□ -0.97
SEC22B-201ENST00000578049 MRPL20Q9BYC9 149 aaKnown RBP8.96□□□□□ -0.97
SEC22B-201ENST00000578049 CEP250Q9BV73 2442 aa8.96□□□□□ -0.98
SEC22B-201ENST00000578049 NPFFO15130 113 aa8.96□□□□□ -0.98
SEC22B-201ENST00000578049 C20orf144Q9BQM9 153 aa8.96□□□□□ -0.98
SEC22B-201ENST00000578049 FBXL7Q9UJT9 491 aa8.96□□□□□ -0.98
SEC22B-201ENST00000578049 IGKV1D-8A0A087WSZ0 117 aa8.96□□□□□ -0.98
SEC22B-201ENST00000578049 ST6GALNAC6Q969X2 333 aa8.96□□□□□ -0.98
SEC22B-201ENST00000578049 ZNF479Q96JC4 524 aa8.96□□□□□ -0.98
SEC22B-201ENST00000578049 PSG8Q9UQ74 426 aa8.96□□□□□ -0.98
SEC22B-201ENST00000578049 FOXA2Q9Y261 457 aaPredicted RBP8.96□□□□□ -0.98
SEC22B-201ENST00000578049 CYSLTR1Q9Y271 337 aa8.96□□□□□ -0.98
SEC22B-201ENST00000578049 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.96□□□□□ -0.98
SEC22B-201ENST00000578049 RTTNQ86VV8 2226 aa8.96□□□□□ -0.98
SEC22B-201ENST00000578049 TIAF1O95411 115 aa8.96□□□□□ -0.98
SEC22B-201ENST00000578049 NHP2Q9NX24 153 aaKnown RBP8.96□□□□□ -0.98
SEC22B-201ENST00000578049 SAA2-SAA4A0A096LPE2 208 aa8.95□□□□□ -0.98
SEC22B-201ENST00000578049 SAA2P0DJI9 122 aaPredicted RBP8.95□□□□□ -0.98
SEC22B-201ENST00000578049 ESPL1Q14674 2120 aa8.95□□□□□ -0.98
SEC22B-201ENST00000578049 ZNF585BQ52M93 769 aa8.95□□□□□ -0.98
SEC22B-201ENST00000578049 RNF125Q96EQ8 232 aa8.95□□□□□ -0.98
SEC22B-201ENST00000578049 FBXL15Q9H469 300 aa8.95□□□□□ -0.98
SEC22B-201ENST00000578049 SPAARA0A1B0GVQ0 90 aa8.95□□□□□ -0.98
SEC22B-201ENST00000578049 TMEM42Q69YG0 159 aa8.95□□□□□ -0.98
SEC22B-201ENST00000578049 ARPC1AQ92747 370 aa8.95□□□□□ -0.98
SEC22B-201ENST00000578049 ZNF319Q9P2F9 582 aa8.95□□□□□ -0.98
SEC22B-201ENST00000578049 NRXN2Q9P2S2 1712 aa8.95□□□□□ -0.98
SEC22B-201ENST00000578049 NKX2-8O15522 239 aa8.95□□□□□ -0.98
SEC22B-201ENST00000578049 FTH1P19P0C7X4 201 aa8.95□□□□□ -0.98
SEC22B-201ENST00000578049 SSBP4Q9BWG4 385 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms